Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0543200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26958516:26961422:1 gene:Os05g0543200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ran GTPase activating protein. (Os05t0543200-01)
Sequence	ATGGATTCGACTAAGCAAGATTTCCAACCCCGGACATTCTCCATCAAACTGTGGCCACCA AGTGAAAGCACTCGTCTCATGCTTGTGGAGAGGATGACCAAGAACCTTTCCACAGAGTCC ATATTTTCTCGCAAGTACGGCCTTTTGGGCAAGGAAGAGGCTCATGATAATGCTAAAAGG ATCGAAGAGGTATGCTTTGCCTCTGCAGACGAGCATTTCAAGGAGGAGCCTGATGGGGAT GGGAGTTCTGCTGTCCAGCTGTACGCAAAGGAAACTAGCAAGTTGATGCTGGAAGTTCTG AAAAGAGGGCCAAGGACCACTGTGGAACCAGAAGTACCTGTTGCTGATACACCTCTTGAG CCTGCTGATTCTGTATTTGATATATCTGGTGGCAAGCGTGCGTTTATTGAGGCAGATGAA GCGAAGGAACTTTTGAGCCCGCTTATCAAACCAGGAAATGCATATAAACGGATTTGCTTC AGCAACAGGAGCTTTGGTATTGGTGCTGCCAATGTTGCTGGACCTATTCTGGAATCAATC AAAAAGCAACTCACAGAGGTGGATATATCAGATTTTGTTGCTGGCAGACCTGAGGATGAA GCCCTTGATGTGATGCGCATCTTCTCAAAAGCTTTAGAAGGCGCTGTACTGAGATACTTG AACATCTCTGATAATGCTTTAGGTGAGAAGGGTGTCAGAGCATTTGAAGAGCTCCTGAAA TCACAGGACAACCTGGAAGAACTATATGTGATGAATGATGGTATATCAGAGGAAGCCGCA CAAGCTCTTTCTGAACTTATTCCTTCAACTGAGAAGCTTAAGATCCTCCACTTCCACAAC AATATGACGGGGGATGAAGGTGCTATGTTTATTGCTGAGATGGTTAAACGTTCTCCTAAT CTAGAGAGTTTCAGGTGCTCAGCAACAAGGATAGGATCTGATGGTGGGGTGGCTCTGGCT GAGGCATTAGGGACTTGTACTCGTCTGAAGAAACTTGATCTCAGGGACAACTTGTTTGGA GTTGAGGCAGGGTTGGCTCTCAGCAAAACCCTTTCAAAACTTCCTGATCTTGTTGAGCTG TATCTCAGTGATCTCAATCTTGAGAACAAGGGCACTGTAGCAATTATCAATACCCTCAAA CAGTCAGCACCCCAGTTGGAGGTCCTTGAAATGGCTGGGAATGAAATTAACGCCAAAGCA TCCCAAGCTTTAGCAGAATGCCTGACAGCAATGCAATCACTTAAGAAGTTGACCTTGGCA GAGAATGAACTGAAGGATGATGGTGCTGTGGTGATTGCAAAATCACTGGAAGATGGACAC CAGGATCTGAAGGAGCTTGATGTTAGCACGAATATGCTGCAGAGGGTGGGAGCTCGGTGC TTTGCCCAGGCAATCGCAAACAAGCCAGGTTTTGTGCAACTGAACATAAACGGGAATTTC ATCTCGGACGAAGGGATTGATGAGGTGAAAGATATTCTGAAGAGTGGTGAGAACTCTGTG GAGGTGCTTGGTCCACTAGATGAGAACGACCCTGAGGGGGAGGCTGAAGATGATGAGGAA GAGGAAGAGGAGGAAGAGGATGACGGTGAGCTGGACTCGAAGCTTCAGAGCCTGAAGGTT GAGCAGGACGATTAG

Peptide Sequence

PEP ID	Os05t0543200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26958516:26961422:1 gene:Os05g0543200 transcript:Os05t0543200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ran GTPase activating protein. (Os05t0543200-01)
Sequence	MDSTKQDFQPRTFSIKLWPPSESTRLMLVERMTKNLSTESIFSRKYGLLGKEEAHDNAKR IEEVCFASADEHFKEEPDGDGSSAVQLYAKETSKLMLEVLKRGPRTTVEPEVPVADTPLE PADSVFDISGGKRAFIEADEAKELLSPLIKPGNAYKRICFSNRSFGIGAANVAGPILESI KKQLTEVDISDFVAGRPEDEALDVMRIFSKALEGAVLRYLNISDNALGEKGVRAFEELLK SQDNLEELYVMNDGISEEAAQALSELIPSTEKLKILHFHNNMTGDEGAMFIAEMVKRSPN LESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAGLALSKTLSKLPDLVEL YLSDLNLENKGTVAIINTLKQSAPQLEVLEMAGNEINAKASQALAECLTAMQSLKKLTLA ENELKDDGAVVIAKSLEDGHQDLKELDVSTNMLQRVGARCFAQAIANKPGFVQLNINGNF ISDEGIDEVKDILKSGENSVEVLGPLDENDPEGEAEDDEEEEEEEEDDGELDSKLQSLKV EQDD

Transcript Sequence

Transcript ID	Os05t0543200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26958516:26961422:1 gene:Os05g0543200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ran GTPase activating protein. (Os05t0543200-01)
Sequence	GCCCGCCGCATCAACCAAAATTCCAAAGAGCCAAAAACCCTAGCGCGCCGCATCCCCCGC CGCCGCCTCCGCCTCCGCCGCGGGTAAATCCCTCCTCGTCGTCTCCTCCGCTCCTCGTGC CATCTCGCGGCTGAACAGGGGAGGGGATCCTGGTTGCTGTTACTGCCATATTTTCACATG GATTCGACTAAGCAAGATTTCCAACCCCGGACATTCTCCATCAAACTGTGGCCACCAAGT GAAAGCACTCGTCTCATGCTTGTGGAGAGGATGACCAAGAACCTTTCCACAGAGTCCATA TTTTCTCGCAAGTACGGCCTTTTGGGCAAGGAAGAGGCTCATGATAATGCTAAAAGGATC GAAGAGGTATGCTTTGCCTCTGCAGACGAGCATTTCAAGGAGGAGCCTGATGGGGATGGG AGTTCTGCTGTCCAGCTGTACGCAAAGGAAACTAGCAAGTTGATGCTGGAAGTTCTGAAA AGAGGGCCAAGGACCACTGTGGAACCAGAAGTACCTGTTGCTGATACACCTCTTGAGCCT GCTGATTCTGTATTTGATATATCTGGTGGCAAGCGTGCGTTTATTGAGGCAGATGAAGCG AAGGAACTTTTGAGCCCGCTTATCAAACCAGGAAATGCATATAAACGGATTTGCTTCAGC AACAGGAGCTTTGGTATTGGTGCTGCCAATGTTGCTGGACCTATTCTGGAATCAATCAAA AAGCAACTCACAGAGGTGGATATATCAGATTTTGTTGCTGGCAGACCTGAGGATGAAGCC CTTGATGTGATGCGCATCTTCTCAAAAGCTTTAGAAGGCGCTGTACTGAGATACTTGAAC ATCTCTGATAATGCTTTAGGTGAGAAGGGTGTCAGAGCATTTGAAGAGCTCCTGAAATCA CAGGACAACCTGGAAGAACTATATGTGATGAATGATGGTATATCAGAGGAAGCCGCACAA GCTCTTTCTGAACTTATTCCTTCAACTGAGAAGCTTAAGATCCTCCACTTCCACAACAAT ATGACGGGGGATGAAGGTGCTATGTTTATTGCTGAGATGGTTAAACGTTCTCCTAATCTA GAGAGTTTCAGGTGCTCAGCAACAAGGATAGGATCTGATGGTGGGGTGGCTCTGGCTGAG GCATTAGGGACTTGTACTCGTCTGAAGAAACTTGATCTCAGGGACAACTTGTTTGGAGTT GAGGCAGGGTTGGCTCTCAGCAAAACCCTTTCAAAACTTCCTGATCTTGTTGAGCTGTAT CTCAGTGATCTCAATCTTGAGAACAAGGGCACTGTAGCAATTATCAATACCCTCAAACAG TCAGCACCCCAGTTGGAGGTCCTTGAAATGGCTGGGAATGAAATTAACGCCAAAGCATCC CAAGCTTTAGCAGAATGCCTGACAGCAATGCAATCACTTAAGAAGTTGACCTTGGCAGAG AATGAACTGAAGGATGATGGTGCTGTGGTGATTGCAAAATCACTGGAAGATGGACACCAG GATCTGAAGGAGCTTGATGTTAGCACGAATATGCTGCAGAGGGTGGGAGCTCGGTGCTTT GCCCAGGCAATCGCAAACAAGCCAGGTTTTGTGCAACTGAACATAAACGGGAATTTCATC TCGGACGAAGGGATTGATGAGGTGAAAGATATTCTGAAGAGTGGTGAGAACTCTGTGGAG GTGCTTGGTCCACTAGATGAGAACGACCCTGAGGGGGAGGCTGAAGATGATGAGGAAGAG GAAGAGGAGGAAGAGGATGACGGTGAGCTGGACTCGAAGCTTCAGAGCCTGAAGGTTGAG CAGGACGATTAGTCATGTTTAGGTTAAACTTGAACTATCTTTTTTCTTTCTTGAATTAGC TTCAAAACGTTTTGCTGCCAGGTTGTACTTTCACTTTGATGTTTGAACAGACGCACTGCA GGCAGATGGTTTATAGCCTGGTGGTTTATCTATGCCTGTGTAACTTCCATTAGAATTTGT TTCATGTATTAGCAACAACCTGGTTAGTCAAGACCAAAGGTCAGCTGTAGCTGGATCCTT GCATCATTG