Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0542500-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:26927609:26928879:1 gene:Os05g0542500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT 3-1 description:Similar to Isoform 2 of Late embryogenesis abundant protein, group 3. (Os05t0542500-01);LEA-like protein. (Os05t0542500-02)
Sequence	ATGGCTTCCCACCAGGACCAGGCTAGCTACCGCGCCGGCGAGACCAAGGCCCACACCGAG GAGAAGGCGGGGCAGGTGATGGGGGCGAGCAAGGACAAGGCGAGCGAGGCGAAGGACAGG GCGTCGGAGGCGGCGGGGCACGCCGCCGGCAAGGGGCAGGATACCAAGGAGGCGACGAAG GAGAAGGCGCAGGCGGCGAAGGAGAGGGCGTCGGAGACGGCGCAGGCGGCGAAGGACAAG ACCTCCAGCACGTCGCAGGCGGCGAGGGACAAAGCCGCCGAGAGCAAGGACCAGACCGGC GGCTTCCTCGGCGAGAAGACCGAGCAGGCCAAGCAGAAGGCCGCCGAGACCGCTGGCGCC GCCAAGCAGAAGACCGCCGAGACGGCGCAGTACACCAAGGACTCTGCCATCGCCGGCAAG GACAAGACCGGCAGCGTCCTCCAACAGGCGAGTGAGCAGGTGAAGAGCACGGTGGTCGGC GCCAAGGACGCGGTGATGAGCACGCTGGGGATGACCGAAGACGAGGCCGGCACCGACGAC GGCGCCAACAAGGACACCTCTGCCACCGCCGCCGCCACGGAGACGACGGCGAGGGATCAC TAG

Peptide Sequence

PEP ID	Os05t0542500-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:26927609:26928879:1 gene:Os05g0542500 transcript:Os05t0542500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT 3-1 description:Similar to Isoform 2 of Late embryogenesis abundant protein, group 3. (Os05t0542500-01);LEA-like protein. (Os05t0542500-02)
Sequence	MASHQDQASYRAGETKAHTEEKAGQVMGASKDKASEAKDRASEAAGHAAGKGQDTKEATK EKAQAAKERASETAQAAKDKTSSTSQAARDKAAESKDQTGGFLGEKTEQAKQKAAETAGA AKQKTAETAQYTKDSAIAGKDKTGSVLQQASEQVKSTVVGAKDAVMSTLGMTEDEAGTDD GANKDTSATAAATETTARDH

Transcript Sequence

Transcript ID	Os05t0542500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26927609:26928879:1 gene:Os05g0542500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE EMBRYOGENESIS ABUNDANT 3-1 description:Similar to Isoform 2 of Late embryogenesis abundant protein, group 3. (Os05t0542500-01);LEA-like protein. (Os05t0542500-02)
Sequence	AGCCAGTGCAAATCTGATCGATCAAGATAATCGAGCAAAATCCATCAGAGTTCTAACATT CGCGCGTGAATTTCGAGGTTAATTTTTGAAGCTTAGGATCAATGGCTTCCCACCAGGACC AGGCTAGCTACCGCGCCGGCGAGACCAAGGCCCACACCGAGGAGAAGGCGGGGCAGGTGA TGGGGGCGAGCAAGGACAAGGCGAGCGAGGCGAAGGACAGGGCGTCGGAGGCGGCGGGGC ACGCCGCCGGCAAGGGGCAGGATACCAAGGAGGCGACGAAGGAGAAGGCGCAGGCGGCGA AGGAGAGGGCGTCGGAGACGGCGCAGGCGGCGAAGGACAAGACCTCCAGCACGTCGCAGG CGGCGAGGGACAAAGCCGCCGAGAGCAAGGACCAGACCGGCGGCTTCCTCGGCGAGAAGA CCGAGCAGGCCAAGCAGAAGGCCGCCGAGACCGCTGGCGCCGCCAAGCAGAAGACCGCCG AGACGGCGCAGTACACCAAGGACTCTGCCATCGCCGGCAAGGACAAGACCGGCAGCGTCC TCCAACAGGCGAGTGAGCAGGTGAAGAGCACGGTGGTCGGCGCCAAGGACGCGGTGATGA GCACGCTGGGGATGACCGAAGACGAGGCCGGCACCGACGACGGCGCCAACAAGGACACCT CTGCCACCGCCGCCGCCACGGAGACGACGGCGAGGGATCACTAGACGCCGTGAATGATTT CCCTTTGGGTCTATTTATGTATGTTTTCACTTCAAATTCGGTGCAAGTTTGAATTTGTTT TTGTGTCGTTTTGAGTCTGTATCGATGCTGTATGAAGTGGTGGTCGTCGCAGGGGAGGAT TTCTGACGGGTGTGGGTGATGTGTACTGATGATGTTCAGTTGTTTTCGTCAGAGTTTCTC GTCTGTGTTCTGTTTATTATGGCGTAACAATAATAAAAGTTTGGGCCTAAAGCCCGCATT TGTGGTTT