Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0542100-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:26907931:26910905:-1 gene:Os05g0542100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Fiber protein Fb11. (Os05t0542100-01)
Sequence

ATGGGAGTGATGGAGAAGCTCAAGATCTTCGCGGTGAAGGAGCCCGTCGTCACCGCCTCC
TGCCTCATCGCCGGATTCGGTCTTTTTCTTCCAGCAGTTGTCAGACCAATGTTGGATTCT
TGGGAGACAGCAAAACAAGTTCCTCCACCTGCGCTGAATGATGTTGTTGCAGGCGTCACC
GGCAAGAAAAAGGAGTGA

Peptide Sequence

PEP ID

Os05t0542100-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:26907931:26910905:-1 gene:Os05g0542100 transcript:Os05t0542100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Fiber protein Fb11. (Os05t0542100-01)
Sequence

MGVMEKLKIFAVKEPVVTASCLIAGFGLFLPAVVRPMLDSWETAKQVPPPALNDVVAGVT
GKKKE

Transcript Sequence

Transcript ID

Os05t0542100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:26907931:26910905:-1 gene:Os05g0542100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Fiber protein Fb11. (Os05t0542100-01)
Sequence

TCTCTCTCTCTCTCTACAGCGACGGCGGCGGCGGCGGCGAGGTGAGAGGAAGGAGAAGGG
GATCGAGGAGGAGGAGGCAAGCGCAGCCACCATGGGAGTGATGGAGAAGCTCAAGATCTT
CGCGGTGAAGGAGCCCGTCGTCACCGCCTCCTGCCTCATCGCCGGATTCGGTCTTTTTCT
TCCAGCAGTTGTCAGACCAATGTTGGATTCTTGGGAGACAGCAAAACAAGTTCCTCCACC
TGCGCTGAATGATGTTGTTGCAGGCGTCACCGGCAAGAAAAAGGAGTGACTTGGCATCTT
TTCCACTTGCTAATGTTGTCGCAACGATTTCTCTTTGTTTTGACTCCGGATGGGAAGCCT
CTCCCAGTCCAGATGATTAGGATCATCCATTCATATGTCCAGCACAGTGTGAAAACAGTA
CTACATGTGATCGGCAAAATAATCGTGTTGTACCTGAACTTACTTTCAACATAATGAAAT
TAATGCTGCAATTTTCAGCTTTG