Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0540800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26849865:26857015:1 gene:Os05g0540800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0540800-01);Similar to DNA methyltransferase 1-associated protein 1. (Os05t0540800-02)
Sequence	ATGGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAG AAGCCCCGCGCGCCCAAGGAGCCGCAGCGGAAGCCCGATGGCGTCTCGCGCGAGGTGTAC GCGCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTG AAGCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCC TCTGCACGGACTGACAACCTTCAACTTTACCATTGGGTTAGAGTTGTAAATGGTGCTCCA CCCACTGGTGACTATCACTTTGCAAAATACAACAAGAAGGCGGATGTTCTCAAATACACC GATGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAA CTATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCA ACTGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGTTACTCGTGCTCTTCTG ATTGCTAGAGCTCGGTCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTC AATGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAA CAGCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGT GCTGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGT GTATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTG AATAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTT GATCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGAC CAGACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGC GTCGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTG CAAAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGC ACACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTT GCAGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACCACTGGAAGATTTATAGAT GCACCTCCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGA

Peptide Sequence

PEP ID	Os05t0540800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26849865:26857015:1 gene:Os05g0540800 transcript:Os05t0540800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0540800-01);Similar to DNA methyltransferase 1-associated protein 1. (Os05t0540800-02)
Sequence	MDAKDILGLPKTAFPSVQEKKPRAPKEPQRKPDGVSREVYALTGGVGMAPLMPTIEASHL KRRPAVEKEKIAWQWLPFTSSARTDNLQLYHWVRVVNGAPPTGDYHFAKYNKKADVLKYT DEEYEKYLTDPAWSREETDKLFELCERFDLRFIVIVDRFPTDRSMEDLKSRYYSVTRALL IARARSFDEVAGNPLVKETFNAAHETERKRALSALLSQTKQQERKDAEILAEAKRIMETR AASKHTEEAGALAHFDNVDGVSPLSNTHPLSTATLPAAAVNNSIPASLRMLRVYLRTQAL DQMVQAASASAGLRVIKRVDQTLQDLGVNLKPKVPTKAVCVEHLELRNEILTLLNLQKQL QNKEAEVSANRENSFTEAPSTPKRANRDVDRPFVPDTVGFAGERAGKRDHKRKTTGRFID APPSPPQSKRPRKLKASD

Transcript Sequence

Transcript ID	Os05t0540800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26849865:26857015:1 gene:Os05g0540800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os05t0540800-01);Similar to DNA methyltransferase 1-associated protein 1. (Os05t0540800-02)
Sequence	AGAGCTCAGCTCGACGCAACGCAGACGCAGGCGGCGGCTTCGGCCTACCTCGATCTCTCT CCCATGGCGCACTAGACCAAAACCCTAACCCTAGGTCCGCCTCCTCCGTCCGGCGGCAAT GGACGCGAAGGACATCCTCGGCCTCCCCAAGACCGCCTTCCCGTCCGTCCAGGAGAAGAA GCCCCGCGCGCCCAAGGAGCCGCAGCGGAAGCCCGATGGCGTCTCGCGCGAGGTGTACGC GCTCACTGGAGGGGTGGGGATGGCTCCACTCATGCCGACCATCGAGGCTTCGCACCTGAA GCGGCGACCAGCTGTTGAGAAGGAGAAGATAGCATGGCAGTGGCTACCTTTCACGTCCTC TGCACGGACTGACAACCTTCAACTTTACCATTGGGTTAGAGTTGTAAATGGTGCTCCACC CACTGGTGACTATCACTTTGCAAAATACAACAAGAAGGCGGATGTTCTCAAATACACCGA TGAGGAGTATGAGAAGTATTTAACCGATCCTGCATGGAGCAGGGAGGAAACAGATAAACT ATTTGAACTATGTGAACGCTTTGACCTTCGCTTCATAGTAATAGTTGATAGGTTCCCAAC TGATCGCAGCATGGAGGATTTGAAGAGCCGTTATTATTCTGTTACTCGTGCTCTTCTGAT TGCTAGAGCTCGGTCATTTGATGAAGTTGCTGGTAATCCCCTTGTGAAGGAAACATTCAA TGCTGCTCATGAGACCGAGAGAAAGCGTGCTTTATCTGCACTTCTCTCCCAGACAAAACA GCAAGAACGAAAGGATGCTGAGATTTTAGCAGAAGCAAAACGCATTATGGAAACTCGTGC TGCTAGCAAACATACTGAGGAAGCGGGAGCACTGGCACACTTTGATAATGTTGATGGTGT ATCTCCCTTGAGCAACACACACCCATTGTCAACTGCTACACTTCCAGCTGCAGCAGTGAA TAACTCCATACCTGCTTCACTGCGAATGCTTCGAGTGTATTTGAGAACCCAAGCGCTTGA TCAAATGGTCCAAGCAGCAAGTGCCTCGGCGGGCCTTAGAGTTATCAAAAGGGTTGACCA GACTTTACAAGACCTCGGGGTGAATTTGAAGCCCAAGGTCCCGACGAAAGCAGTTTGCGT CGAGCATCTTGAACTACGGAATGAGATACTTACACTGCTTAACTTACAGAAGCAGCTGCA AAATAAAGAAGCTGAAGTTTCAGCTAACAGAGAAAATTCCTTTACAGAGGCACCAAGCAC ACCTAAGCGTGCTAATAGAGATGTTGATAGACCCTTTGTTCCTGATACTGTTGGGTTTGC AGGTGAGAGAGCAGGCAAGCGGGACCACAAGCGGAAGACCACTGGAAGATTTATAGATGC ACCTCCCTCACCACCCCAGTCCAAGAGGCCTCGGAAGTTGAAAGCATCTGATTGATGAGT TTCAGATTGAGCTGCATAGAATTTCAACAAGCCAAAACCCCTGATAGTGCTATGGATCAA CTCCATTCTTGCTTGGAAGCTTCCCGGCGTGCACTTTCACCAAGAGTTTGCTCCCGTCGG TAGAAGCCGTTCTTGGCTTTTGTCTGTACAGTGCATCTGCCCTGAGAAGGTTTTCTTCGT ACTCCTCGTTGGAAGATGAGACGAATCAGGTGGAAGCAGCTGCTGGCGTCACTGAGAAGT GATCGCCTTGAGCCCTTGACGTCTCCCCCTACTCAACGAAGAGTGTAACTGTTTCTTTTG TTTGTTTGAGCTGTAGCTACCGTTTGTAAAATGAGTTATCTGACAATACCGTGTTTGTTC AAGTAGAACTGTAACACAACTGTTTACACCCAATCAATCCTGTAATCTTGGACAATTTAA CGAGGAACCGCGATCCCAATGCAAACCTGAGCCTGGTTTCC