Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0540600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26846176:26847985:-1 gene:Os05g0540600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 275 description:Cyclin-like F-box domain containing protein. (Os05t0540600-01)
Sequence	ATGGATCCGCCCATGGCGCCAGCGCCGCCGCCCTCCACCCACTCCACCGCACCCTTCGCA ACTCCGGAGGTGCGTTCTGTCGCCGCCAGACGCCCGCGGCCTGCGGCGGCGAGCATCTCC GCGCGCCTACGCGACGTGGCGAGGAGGAGGAAGGATAGGCCTCGTCGCTGCCGGGCACAG GTGGCTCCCCGCGGCGGCGACCGCATCAGCGCCCTCTCCGACGATGTGCTCCTCCTCATC CTGCGGCGGCTCGCCACCCGCGCCGCGCTCGCCACCGCTATGCTCTCCAAGCGCTGGGCC CGGCTCCTGCGCTGGCTTGACACCCTCGATTTCATGGTCGGTGAAATACTCCCGCCGCGC TACCGTAGGTGCATCCAACTCCACCAAGCGGCTGGTTTTGCTGCGTATCCCGTTGATGTC AAGGTTCTCGTTGCAAGTATCAAGCGACACGAGCGCCTTGCCATGCGAAACATAGCGGCC TCCATCAATAGCTTGTTAGACGCGGATGGCAGTGATGAATGTGCTGGCCAAGCTCGACGG AGGGCCCGTGTGCTGCGGGTGGAGTTCTTTGCGACTCACTACACCGATCTTATGAACCGA TTGATCACCAAGGCATTGGATGCTTGGGAAGTCGAGGATCTTGAAGTTTTTGCTAAGCCT GCATATTGGTCTGAGTGGTCTCTGCCGCCGATTGTCCACAGATTTCCTCACCATGGTCTC TGCATTGAGCCCCACAAGTCCCGGCTGAGAAGCTTGAAGCTAGGTGGTTGTATCATTCCG CCATTGCAGGGGTTCCACGCTCTCACCAAAATGACCTTGCAAGACTTGCGAAACTCCGTG GCCAAAGCATCCTATGAAGATGTGTTTAAGTCATGCCCCCAGTTGCAAGTGCTACACCTC AAGTCATGCAGGTGGGCGGACCGGGGCATTCTGGTTATCGATTTCCCAAAGTCAGGGATT AAGCAGCTTATTGTGGAGTTTTGCAGCGCCATTGCACTACACTCTCTTGGGATGCTTGAG AGCATAGCTATAAGGGAGACTTGGGTCAGGTATAAGCATTGCTCCTTCTCGCATCTTATG CACATGAACCTTAACTTACGCCATGGTTACCGTAATCGTCTGCGTGACTTATGTATTGGT TGGGACTTGAACATCCAGCAGTTTCTTGGATTCACCAAGAACATAACCAACCTGGTTCTA CGATTCACTGGATATGGGAGATGGTTCGTGCCATCTTGCCCCTCGTTGTTGCTGGCTAAT CTCAGAAGGCTCCTGATTGCTGATGTGCCTTCATCATGGGATGTCTCTTGGCCTCGCCTC CTACTTGAAGCAGCACCATGCCTGGAGAGCCTTCACATCCATATTATCCCTTGGGATGAC GATTCTTTTGATGAAATCATTTGGCAACCATCCACTTTGCAGCATGAAGAACTAAAAGAG TTGGTTGTAATTGGTTTCGAGGGAACAGAAAGACAGATTTACTTTGTTAACTTTGTGATG GAAGTATCAACAACATTGCAGCTTGTTGCTCTATTTAGATATGGGCATGTTCAAGAAATG GGGCGTTGGGACTGGAAAATTGTGAGGCAGCAACACCATTGGAATGATGAGGAGAAAGCC CAAATTCTGAACCAGTTTGCTGATAGAGATTCTTGCTCAATAACTCCAGTTCAAGTAGTT GTAGAGTGA

Peptide Sequence

PEP ID	Os05t0540600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26846176:26847985:-1 gene:Os05g0540600 transcript:Os05t0540600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 275 description:Cyclin-like F-box domain containing protein. (Os05t0540600-01)
Sequence	MDPPMAPAPPPSTHSTAPFATPEVRSVAARRPRPAAASISARLRDVARRRKDRPRRCRAQ VAPRGGDRISALSDDVLLLILRRLATRAALATAMLSKRWARLLRWLDTLDFMVGEILPPR YRRCIQLHQAAGFAAYPVDVKVLVASIKRHERLAMRNIAASINSLLDADGSDECAGQARR RARVLRVEFFATHYTDLMNRLITKALDAWEVEDLEVFAKPAYWSEWSLPPIVHRFPHHGL CIEPHKSRLRSLKLGGCIIPPLQGFHALTKMTLQDLRNSVAKASYEDVFKSCPQLQVLHL KSCRWADRGILVIDFPKSGIKQLIVEFCSAIALHSLGMLESIAIRETWVRYKHCSFSHLM HMNLNLRHGYRNRLRDLCIGWDLNIQQFLGFTKNITNLVLRFTGYGRWFVPSCPSLLLAN LRRLLIADVPSSWDVSWPRLLLEAAPCLESLHIHIIPWDDDSFDEIIWQPSTLQHEELKE LVVIGFEGTERQIYFVNFVMEVSTTLQLVALFRYGHVQEMGRWDWKIVRQQHHWNDEEKA QILNQFADRDSCSITPVQVVVE

Transcript Sequence

Transcript ID	Os05t0540600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26846176:26847985:-1 gene:Os05g0540600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 275 description:Cyclin-like F-box domain containing protein. (Os05t0540600-01)
Sequence	ATGTCCCAAGATGGATCCGCCCATGGCGCCAGCGCCGCCGCCCTCCACCCACTCCACCGC ACCCTTCGCAACTCCGGAGGTGCGTTCTGTCGCCGCCAGACGCCCGCGGCCTGCGGCGGC GAGCATCTCCGCGCGCCTACGCGACGTGGCGAGGAGGAGGAAGGATAGGCCTCGTCGCTG CCGGGCACAGGTGGCTCCCCGCGGCGGCGACCGCATCAGCGCCCTCTCCGACGATGTGCT CCTCCTCATCCTGCGGCGGCTCGCCACCCGCGCCGCGCTCGCCACCGCTATGCTCTCCAA GCGCTGGGCCCGGCTCCTGCGCTGGCTTGACACCCTCGATTTCATGGTCGGTGAAATACT CCCGCCGCGCTACCGTAGGTGCATCCAACTCCACCAAGCGGCTGGTTTTGCTGCGTATCC CGTTGATGTCAAGGTTCTCGTTGCAAGTATCAAGCGACACGAGCGCCTTGCCATGCGAAA CATAGCGGCCTCCATCAATAGCTTGTTAGACGCGGATGGCAGTGATGAATGTGCTGGCCA AGCTCGACGGAGGGCCCGTGTGCTGCGGGTGGAGTTCTTTGCGACTCACTACACCGATCT TATGAACCGATTGATCACCAAGGCATTGGATGCTTGGGAAGTCGAGGATCTTGAAGTTTT TGCTAAGCCTGCATATTGGTCTGAGTGGTCTCTGCCGCCGATTGTCCACAGATTTCCTCA CCATGGTCTCTGCATTGAGCCCCACAAGTCCCGGCTGAGAAGCTTGAAGCTAGGTGGTTG TATCATTCCGCCATTGCAGGGGTTCCACGCTCTCACCAAAATGACCTTGCAAGACTTGCG AAACTCCGTGGCCAAAGCATCCTATGAAGATGTGTTTAAGTCATGCCCCCAGTTGCAAGT GCTACACCTCAAGTCATGCAGGTGGGCGGACCGGGGCATTCTGGTTATCGATTTCCCAAA GTCAGGGATTAAGCAGCTTATTGTGGAGTTTTGCAGCGCCATTGCACTACACTCTCTTGG GATGCTTGAGAGCATAGCTATAAGGGAGACTTGGGTCAGGTATAAGCATTGCTCCTTCTC GCATCTTATGCACATGAACCTTAACTTACGCCATGGTTACCGTAATCGTCTGCGTGACTT ATGTATTGGTTGGGACTTGAACATCCAGCAGTTTCTTGGATTCACCAAGAACATAACCAA CCTGGTTCTACGATTCACTGGATATGGGAGATGGTTCGTGCCATCTTGCCCCTCGTTGTT GCTGGCTAATCTCAGAAGGCTCCTGATTGCTGATGTGCCTTCATCATGGGATGTCTCTTG GCCTCGCCTCCTACTTGAAGCAGCACCATGCCTGGAGAGCCTTCACATCCATATTATCCC TTGGGATGACGATTCTTTTGATGAAATCATTTGGCAACCATCCACTTTGCAGCATGAAGA ACTAAAAGAGTTGGTTGTAATTGGTTTCGAGGGAACAGAAAGACAGATTTACTTTGTTAA CTTTGTGATGGAAGTATCAACAACATTGCAGCTTGTTGCTCTATTTAGATATGGGCATGT TCAAGAAATGGGGCGTTGGGACTGGAAAATTGTGAGGCAGCAACACCATTGGAATGATGA GGAGAAAGCCCAAATTCTGAACCAGTTTGCTGATAGAGATTCTTGCTCAATAACTCCAGT TCAAGTAGTTGTAGAGTGATCTGTTATGTTAATGTTTTACTTGTATACAAGGCTTTAAGT TATAAAGCATGCATCTGTTATGTTACTTGTATACAAGGCTTTAAGTTATAAAGCATGCAT CTGTTATGTC