Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0540000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26824644:26828499:1 gene:Os05g0540000 gene_biotype:protein_coding transcript_biotype:protein_coding description:EXTL2, alpha-1,4-N-acetylhexosaminyltransferase domain containing protein. (Os05t0540000-01)
Sequence	ATGGCGGGGCGGCGAGCTATGAGGCCGAGCGGCAGCAGCATGCGTGGGGTGGTGGCGCGG CTGGCCGCCGCGCGGTCGCCGGCCGTGTCGTTCCTGGTGGCGGCGGCGGCGGGCGCGGCG CTCGTCGGAGGGGTGTACTTCTGGCTGGTGGTCTCGTCGTTCCGCCTCCCCGACTCCCGC GCCGTTGGGTGCTTGCCTGATGGCGAGGGGTCGTGGGCGATCGGGATGTACTACGGGAAG AGCCCCCTCGAGCTCCGCCCCATCGAGCTGGAAGGGAGGAGCAATGGGAACAGCTCGGCG TGGCCGGTGGCGAACCCCGTGCTGACCTGCGCGACCCCGACGGAAGGCGGGTACCCGAGC AACTTCGTCGCTGACCCGTTCCTCTACGTGCAGGGGGACACACTCTTTCTGTTCTTTGAA ACAAAAACAGTAAGCACAATGCAAGGTGATATTGGTGTTGCAAGAAGCTTGGATCAAGGT GCAACATGGGAATTTCTTGGTATTGCTTTAGATGAGGCATGGCATCTGTCATACCCGTTC GTGTTCAAATATGAGAATGAGATTTATATGATGCCAGAGGGGAACAAAAAGAAGGAGCTA CGACTTTATCGAGCTACTAAGTTTCCTCTTGAATGGACATTGGAGAAGGTGCTCATTGAT AAGCCACTTATTGATTCCTCATTAGTTCAATATGATGGACTGTGGTGGCTGTTTGCCTCA GATTTTACACGGCATGGTATAGAAAAGAATGCAGAGCTTGAAATTTGGTACAGCAACTCA CCTCTTGGTCCTTGGAGTGAACATAAGCAAAACCCTATTTACAGATCTGACAAAAGTTTA GGAGCTCGAAACGGTGGAAGGCTATTCATCTTTGAAGGGTCATTGTATCGTCCAGGGCAG GATTGCAGTGGTACCTATGGACGGAAGGTTAAGCTGTACAAGATTGAAAAGCTAACTAAG GAAGAATACAAAGAGGTTCCGGTAAATCTTGGAATCGAAGAGGCAAAGAAAGGGAGGAAT GCTTGGAATGGTATGAGGTACCATCACATAGATGCACAGCAACTTGCCTCTGGTGGATGG GTTGCTGTCATGGATGGTGATCGTGTCCCTTCAGGTGATTCAACAAGACGGTCTCTATTT GGTTACATGGGTTTTTTGGTAGCTGTTGCTCTGGTCACTTTTGTAGGTTTTGTAAAAGGT GCAATCAGTTGCTACATTCCTCCAAGTTTTTGGGTTCCTCTAACTAGGAGAAGTGAGTTA TCTCGTATTTTACCTGTGCATCGCTTCAACCTGAAAATCCGTAGATATTCAACCAGTATT GGCAGGAATATCTCTGCTACCAAAGCAAGGCTCAGTGAGAAAACATGGTCAAACACACTA TTCTTTTGTGTGATTGCTCTCATAGGTATTGTTAATGTCTGCATTGCTGTGCATTTCTTA CTTGGTGGCAATGGCGCTGAAGAGGCATATACACATCAAGGGCAGCACTCTCAATTTACA ATGGTCACAATGACATATGAAGCTCGACTCTGGAACCTGAAACTATTTGTTGAACACTAC TCTAGATGTGAGTCAGTCAGAGAGATAGTTGTTGTCTGGAACAAAGGCAACCATCCTACC AGCGACGCCTTTGATTCAACAGTCCCTGTCAGAATACGTGTGGAAGAAATCAACTCCCTT AACAACCGATTTAGGGGTGACCCTTTGATAAAGACAAGGGCTGTCCTGGAACTGGATGAT GATATCATGATGACTTGCAGTGATGTAGAGAAAGGATTCAAGGTATGGAGAGAACACCCT GAGAGGATGGTGGGCTTTTACCCTCGAATGATAGACGGTGATCCTTTGCAGTACAGGAAT GAGCGATATGCTCGGGGCAAGAAGGGCTACAATTTGATCCTCACAGGTGCTGCTTTCATG GACAGTGAGTTCGCTTTCAGTAAATACTGGAGTCAAGAAGCTAAGGAAGGCAGAGACTAT GTCCACAAGAACTTCAACTGCGAGGACTTGCTCATGAATTTTCTGTATGCAAATGCAAGC TCTTCGAGGACTGTGGAGTATGTTCACCCTGCTTGGGCTATCGACACTTCCAAGCTTTCT TCAGTTGCTATTAGCCGAGACACGCAGAAGCACTATGACATCAGAACGAAATGCTTGGCG AAGTTCGCCTCCATATATGGCCCTCTCCCCCAGAAATGGCTATTTGGCATGAGAGAGGAT GGCTGGGACAAATAG

Peptide Sequence

PEP ID	Os05t0540000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26824644:26828499:1 gene:Os05g0540000 transcript:Os05t0540000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EXTL2, alpha-1,4-N-acetylhexosaminyltransferase domain containing protein. (Os05t0540000-01)
Sequence	MAGRRAMRPSGSSMRGVVARLAAARSPAVSFLVAAAAGAALVGGVYFWLVVSSFRLPDSR AVGCLPDGEGSWAIGMYYGKSPLELRPIELEGRSNGNSSAWPVANPVLTCATPTEGGYPS NFVADPFLYVQGDTLFLFFETKTVSTMQGDIGVARSLDQGATWEFLGIALDEAWHLSYPF VFKYENEIYMMPEGNKKKELRLYRATKFPLEWTLEKVLIDKPLIDSSLVQYDGLWWLFAS DFTRHGIEKNAELEIWYSNSPLGPWSEHKQNPIYRSDKSLGARNGGRLFIFEGSLYRPGQ DCSGTYGRKVKLYKIEKLTKEEYKEVPVNLGIEEAKKGRNAWNGMRYHHIDAQQLASGGW VAVMDGDRVPSGDSTRRSLFGYMGFLVAVALVTFVGFVKGAISCYIPPSFWVPLTRRSEL SRILPVHRFNLKIRRYSTSIGRNISATKARLSEKTWSNTLFFCVIALIGIVNVCIAVHFL LGGNGAEEAYTHQGQHSQFTMVTMTYEARLWNLKLFVEHYSRCESVREIVVVWNKGNHPT SDAFDSTVPVRIRVEEINSLNNRFRGDPLIKTRAVLELDDDIMMTCSDVEKGFKVWREHP ERMVGFYPRMIDGDPLQYRNERYARGKKGYNLILTGAAFMDSEFAFSKYWSQEAKEGRDY VHKNFNCEDLLMNFLYANASSSRTVEYVHPAWAIDTSKLSSVAISRDTQKHYDIRTKCLA KFASIYGPLPQKWLFGMREDGWDK

Transcript Sequence

Transcript ID	Os05t0540000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26824644:26828499:1 gene:Os05g0540000 gene_biotype:protein_coding transcript_biotype:protein_coding description:EXTL2, alpha-1,4-N-acetylhexosaminyltransferase domain containing protein. (Os05t0540000-01)
Sequence	GTGCACCAGCTCATCCATTCCCACTTCCCCCCACAAGCAGCAGCAGCTTAGCGCCGAGAC ATACAGCGAAGCAAAGCGGCGGCTTAATCCGCGCTAATCACCCACTAATACTCTTGTTTA ATCACTCAGGCCTCTCCTCGCCTCGCCTCCTCCGCCTGCTTAAACTAATCTCTCCCCCCT CGTACTCCCGGGCCGGGAGGGCGACGAGGAATCCATCCAGCTCGGAGCACGAGGTCGCGC CCAGGCTGGGATCCGATCGGGCGGTCGATGCCGGCTTCGGCGGCGGCGGAGGCAGGCTGG GGATGGCGGGGCGGCGAGCTATGAGGCCGAGCGGCAGCAGCATGCGTGGGGTGGTGGCGC GGCTGGCCGCCGCGCGGTCGCCGGCCGTGTCGTTCCTGGTGGCGGCGGCGGCGGGCGCGG CGCTCGTCGGAGGGGTGTACTTCTGGCTGGTGGTCTCGTCGTTCCGCCTCCCCGACTCCC GCGCCGTTGGGTGCTTGCCTGATGGCGAGGGGTCGTGGGCGATCGGGATGTACTACGGGA AGAGCCCCCTCGAGCTCCGCCCCATCGAGCTGGAAGGGAGGAGCAATGGGAACAGCTCGG CGTGGCCGGTGGCGAACCCCGTGCTGACCTGCGCGACCCCGACGGAAGGCGGGTACCCGA GCAACTTCGTCGCTGACCCGTTCCTCTACGTGCAGGGGGACACACTCTTTCTGTTCTTTG AAACAAAAACAGTAAGCACAATGCAAGGTGATATTGGTGTTGCAAGAAGCTTGGATCAAG GTGCAACATGGGAATTTCTTGGTATTGCTTTAGATGAGGCATGGCATCTGTCATACCCGT TCGTGTTCAAATATGAGAATGAGATTTATATGATGCCAGAGGGGAACAAAAAGAAGGAGC TACGACTTTATCGAGCTACTAAGTTTCCTCTTGAATGGACATTGGAGAAGGTGCTCATTG ATAAGCCACTTATTGATTCCTCATTAGTTCAATATGATGGACTGTGGTGGCTGTTTGCCT CAGATTTTACACGGCATGGTATAGAAAAGAATGCAGAGCTTGAAATTTGGTACAGCAACT CACCTCTTGGTCCTTGGAGTGAACATAAGCAAAACCCTATTTACAGATCTGACAAAAGTT TAGGAGCTCGAAACGGTGGAAGGCTATTCATCTTTGAAGGGTCATTGTATCGTCCAGGGC AGGATTGCAGTGGTACCTATGGACGGAAGGTTAAGCTGTACAAGATTGAAAAGCTAACTA AGGAAGAATACAAAGAGGTTCCGGTAAATCTTGGAATCGAAGAGGCAAAGAAAGGGAGGA ATGCTTGGAATGGTATGAGGTACCATCACATAGATGCACAGCAACTTGCCTCTGGTGGAT GGGTTGCTGTCATGGATGGTGATCGTGTCCCTTCAGGTGATTCAACAAGACGGTCTCTAT TTGGTTACATGGGTTTTTTGGTAGCTGTTGCTCTGGTCACTTTTGTAGGTTTTGTAAAAG GTGCAATCAGTTGCTACATTCCTCCAAGTTTTTGGGTTCCTCTAACTAGGAGAAGTGAGT TATCTCGTATTTTACCTGTGCATCGCTTCAACCTGAAAATCCGTAGATATTCAACCAGTA TTGGCAGGAATATCTCTGCTACCAAAGCAAGGCTCAGTGAGAAAACATGGTCAAACACAC TATTCTTTTGTGTGATTGCTCTCATAGGTATTGTTAATGTCTGCATTGCTGTGCATTTCT TACTTGGTGGCAATGGCGCTGAAGAGGCATATACACATCAAGGGCAGCACTCTCAATTTA CAATGGTCACAATGACATATGAAGCTCGACTCTGGAACCTGAAACTATTTGTTGAACACT ACTCTAGATGTGAGTCAGTCAGAGAGATAGTTGTTGTCTGGAACAAAGGCAACCATCCTA CCAGCGACGCCTTTGATTCAACAGTCCCTGTCAGAATACGTGTGGAAGAAATCAACTCCC TTAACAACCGATTTAGGGGTGACCCTTTGATAAAGACAAGGGCTGTCCTGGAACTGGATG ATGATATCATGATGACTTGCAGTGATGTAGAGAAAGGATTCAAGGTATGGAGAGAACACC CTGAGAGGATGGTGGGCTTTTACCCTCGAATGATAGACGGTGATCCTTTGCAGTACAGGA ATGAGCGATATGCTCGGGGCAAGAAGGGCTACAATTTGATCCTCACAGGTGCTGCTTTCA TGGACAGTGAGTTCGCTTTCAGTAAATACTGGAGTCAAGAAGCTAAGGAAGGCAGAGACT ATGTCCACAAGAACTTCAACTGCGAGGACTTGCTCATGAATTTTCTGTATGCAAATGCAA GCTCTTCGAGGACTGTGGAGTATGTTCACCCTGCTTGGGCTATCGACACTTCCAAGCTTT CTTCAGTTGCTATTAGCCGAGACACGCAGAAGCACTATGACATCAGAACGAAATGCTTGG CGAAGTTCGCCTCCATATATGGCCCTCTCCCCCAGAAATGGCTATTTGGCATGAGAGAGG ATGGCTGGGACAAATAGTCTCGACAAGGCGGAATAGACAGCCAACACATGCAAATTGTTG AATATTTTTGTTCCTACAACTTCCTTTTTGGTAGAAGTGACTTGTTTAGTGATGTAATTT GGGTAGAAGCCAAGAACCTTGTAAATCATGATCTGTTCAAAGTGGATGATTCTCTGTAGC TTTTGATGAACATGTTAAAATAGCCAAATTCAATGCAGTTTTCTTTGTG