Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0539400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26794411:26801239:-1 gene:Os05g0539400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 9 description:Glycoside hydrolase, family 35 protein. (Os05t0539400-01)
Sequence	ATGGGGCCGTCCAGAAGCTTCCAGAACCTTCTTCTCCTCCTCCTCCCCCTCGCGCTGGCC CTGTGCTCCGCCGCGGCCAGCGGGGAGGCTTCGAGAAGGTTCTGGGTCGAGAACGACACC TTCTGGAAGGATGGCGCCCCGTTCCAGATCGTCGGCGGCGACGTTCACTACTTCCGCATT GTCCCTGAGTACTGGAAAGATCGCCTTTTAAGGGCAAAGGCGCTGGGCTTGAACACAATT CAGACATATGTTCCTTGGAATCTGCATGAGCCAAAACCGCTGAGCTGGGAATTCAAGGGT TTCACAGATATTGAATCATATTTAAGACTTGCTCATGAATTAGATATGCTGGTCATGCTT CGTGTAGGTCCATATATTTGTGGAGAATGGGACTTGGGGGGATTTCCACCTTGGTTACTG ACCATAGAACCAACCATCGAACTGCGTTCTTCAGATTCAACCTATCTTTCCTTGGTGGAC AGATGGTGGGGAGTACTACTCCCAAAAATCGCACCACTATTATACAGCAATGGAGGTCCT ATCATCATGGTGCAGATTGAAAATGAATTTGGTTCATTTGGAGATGACAAGAATTATCTT CATTACCTTGTTGAAGTTGCCAGAAGATATCTTGGGAATGACATTATGCTGTATACAACT GATGGTGGTGCCATTGGAAATCTAAAGAATGGAACAATTCTTCAGGATGATGTTTTCGCT GCTGTTGATTTTGATACTGGTTCCAATCCATGGCCAATATTTCAACTACAGAAGGAATAC AACTTGCCAGGAAAATCAGCTCCTTTAAGCTCAGAATTTTACACTGGATGGCTAACACAC TGGGGGGAAAGAATTGCAACAACTGATGCTAGCAGTACAGCTAAAGCTCTTAAAAGAATT TTGTGCCGCAACGGTTCTGCTGTACTTTATATGGCTCATGGTGGGACTAATTTTGGGTTT TACAATGGTGCAAATACTGGTCAAAATGAATCTGACTACAAGGCAGACCTCACTTCATAT GACTATGATGCACCAATTAGGGAGTATGGGGACGTGCATAATGCAAAATACAAAGCACTA AGAAGAGTTATACATGAATGCACTGGCATTCCTCTTCTCCAACTTCCTTCCAAAATTGAA AGAGCTAGTTATGGGCTTGTAGAAGTACAGAAGGTCGCTTCTTTGTTTGATGTCATTCAT AACATCAGTGATGCTCTGAAAGTGGCTTTTTCAGAGCAGCCTCTATCCATGGAACTGATG GGCCAGATGTTTGGTTTTCTACTGTACACATCAGAATATCAAGAAAAACATTCATCCAGC ATCCTATCAATTCCAAAGGTACATGACAGAGCTCAAGTGTTTGTGTCCTGCTCACACGGT GATGTCAGAAAACCGAGATATGTTGGCATAGTTGAAAGATGGTCGAGTAAAACACTACAA ATACCAAGCTTAAGCTGCTCATCTAATGTCAGCTTATATATCCTGGTAGAAAACATGGGT CGAGTAAATTATGGACCATATATTTTTGACCAGAAGGGCATACTATCTTCTGTTGAAATA GATGGCATTATTCTCCGTCACTGGAAAATGCATCCGGTTTCACTTAATGCGGTGGGCAAC CTTTCAAAACTTCAACTAATCATGCAGATGACTGATGCTGAAGCTAGCAAAGTATCCATT TATGGTGATTCAGAAAATAAGTTGCAGGATGTATCGCTCTATCTAAATGAAGGGATTTCA GAGGAACCGGCATTCTATGAAGGCCATTTTCATATTGACTCTGAATCTGAGAAAAAGGAC ACATTCATATCATTTCGAGGTTGGAATAAAGGAGTCGCTTTTGTGAACAACTTCAACATT GGAAGGTTCTGGCCGGCCATTGGACCACAATGCGCTCTGTATGTTCCTGCGCCGATCCTC AAACCTGGAGATAATGTCATTGTGATCTTTGAACTGCATAGTCCAAACCCTGAGCTCACC ATCAAGTTAGTGAAGGATCCAGATTTCACATGCGGCCAGTGA

Peptide Sequence

PEP ID	Os05t0539400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26794411:26801239:-1 gene:Os05g0539400 transcript:Os05t0539400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 9 description:Glycoside hydrolase, family 35 protein. (Os05t0539400-01)
Sequence	MGPSRSFQNLLLLLLPLALALCSAAASGEASRRFWVENDTFWKDGAPFQIVGGDVHYFRI VPEYWKDRLLRAKALGLNTIQTYVPWNLHEPKPLSWEFKGFTDIESYLRLAHELDMLVML RVGPYICGEWDLGGFPPWLLTIEPTIELRSSDSTYLSLVDRWWGVLLPKIAPLLYSNGGP IIMVQIENEFGSFGDDKNYLHYLVEVARRYLGNDIMLYTTDGGAIGNLKNGTILQDDVFA AVDFDTGSNPWPIFQLQKEYNLPGKSAPLSSEFYTGWLTHWGERIATTDASSTAKALKRI LCRNGSAVLYMAHGGTNFGFYNGANTGQNESDYKADLTSYDYDAPIREYGDVHNAKYKAL RRVIHECTGIPLLQLPSKIERASYGLVEVQKVASLFDVIHNISDALKVAFSEQPLSMELM GQMFGFLLYTSEYQEKHSSSILSIPKVHDRAQVFVSCSHGDVRKPRYVGIVERWSSKTLQ IPSLSCSSNVSLYILVENMGRVNYGPYIFDQKGILSSVEIDGIILRHWKMHPVSLNAVGN LSKLQLIMQMTDAEASKVSIYGDSENKLQDVSLYLNEGISEEPAFYEGHFHIDSESEKKD TFISFRGWNKGVAFVNNFNIGRFWPAIGPQCALYVPAPILKPGDNVIVIFELHSPNPELT IKLVKDPDFTCGQ

Transcript Sequence

Transcript ID	Os05t0539400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26794411:26801239:-1 gene:Os05g0539400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 9 description:Glycoside hydrolase, family 35 protein. (Os05t0539400-01)
Sequence	ACGGCATCTCACGCTGTCTTCATCATCATCAGCCTGAGAGCTGAAAGAATTTGGGCGTAG CTCGCAAGGCACGCTTCGCGGGGAGAAGAATCCAGCAGCTGCAGGTGAAGTCAGTGGAGC GAGGTGGGCGTGAACGCGTGAGCCACCGGAGTCGAGGAATGGGGCCGTCCAGAAGCTTCC AGAACCTTCTTCTCCTCCTCCTCCCCCTCGCGCTGGCCCTGTGCTCCGCCGCGGCCAGCG GGGAGGCTTCGAGAAGGTTCTGGGTCGAGAACGACACCTTCTGGAAGGATGGCGCCCCGT TCCAGATCGTCGGCGGCGACGTTCACTACTTCCGCATTGTCCCTGAGTACTGGAAAGATC GCCTTTTAAGGGCAAAGGCGCTGGGCTTGAACACAATTCAGACATATGTTCCTTGGAATC TGCATGAGCCAAAACCGCTGAGCTGGGAATTCAAGGGTTTCACAGATATTGAATCATATT TAAGACTTGCTCATGAATTAGATATGCTGGTCATGCTTCGTGTAGGTCCATATATTTGTG GAGAATGGGACTTGGGGGGATTTCCACCTTGGTTACTGACCATAGAACCAACCATCGAAC TGCGTTCTTCAGATTCAACCTATCTTTCCTTGGTGGACAGATGGTGGGGAGTACTACTCC CAAAAATCGCACCACTATTATACAGCAATGGAGGTCCTATCATCATGGTGCAGATTGAAA ATGAATTTGGTTCATTTGGAGATGACAAGAATTATCTTCATTACCTTGTTGAAGTTGCCA GAAGATATCTTGGGAATGACATTATGCTGTATACAACTGATGGTGGTGCCATTGGAAATC TAAAGAATGGAACAATTCTTCAGGATGATGTTTTCGCTGCTGTTGATTTTGATACTGGTT CCAATCCATGGCCAATATTTCAACTACAGAAGGAATACAACTTGCCAGGAAAATCAGCTC CTTTAAGCTCAGAATTTTACACTGGATGGCTAACACACTGGGGGGAAAGAATTGCAACAA CTGATGCTAGCAGTACAGCTAAAGCTCTTAAAAGAATTTTGTGCCGCAACGGTTCTGCTG TACTTTATATGGCTCATGGTGGGACTAATTTTGGGTTTTACAATGGTGCAAATACTGGTC AAAATGAATCTGACTACAAGGCAGACCTCACTTCATATGACTATGATGCACCAATTAGGG AGTATGGGGACGTGCATAATGCAAAATACAAAGCACTAAGAAGAGTTATACATGAATGCA CTGGCATTCCTCTTCTCCAACTTCCTTCCAAAATTGAAAGAGCTAGTTATGGGCTTGTAG AAGTACAGAAGGTCGCTTCTTTGTTTGATGTCATTCATAACATCAGTGATGCTCTGAAAG TGGCTTTTTCAGAGCAGCCTCTATCCATGGAACTGATGGGCCAGATGTTTGGTTTTCTAC TGTACACATCAGAATATCAAGAAAAACATTCATCCAGCATCCTATCAATTCCAAAGGTAC ATGACAGAGCTCAAGTGTTTGTGTCCTGCTCACACGGTGATGTCAGAAAACCGAGATATG TTGGCATAGTTGAAAGATGGTCGAGTAAAACACTACAAATACCAAGCTTAAGCTGCTCAT CTAATGTCAGCTTATATATCCTGGTAGAAAACATGGGTCGAGTAAATTATGGACCATATA TTTTTGACCAGAAGGGCATACTATCTTCTGTTGAAATAGATGGCATTATTCTCCGTCACT GGAAAATGCATCCGGTTTCACTTAATGCGGTGGGCAACCTTTCAAAACTTCAACTAATCA TGCAGATGACTGATGCTGAAGCTAGCAAAGTATCCATTTATGGTGATTCAGAAAATAAGT TGCAGGATGTATCGCTCTATCTAAATGAAGGGATTTCAGAGGAACCGGCATTCTATGAAG GCCATTTTCATATTGACTCTGAATCTGAGAAAAAGGACACATTCATATCATTTCGAGGTT GGAATAAAGGAGTCGCTTTTGTGAACAACTTCAACATTGGAAGGTTCTGGCCGGCCATTG GACCACAATGCGCTCTGTATGTTCCTGCGCCGATCCTCAAACCTGGAGATAATGTCATTG TGATCTTTGAACTGCATAGTCCAAACCCTGAGCTCACCATCAAGTTAGTGAAGGATCCAG ATTTCACATGCGGCCAGTGAAGTTGGAGCATAGATTATTCCCATTCGGTATGATTTGTAT AGGTTTCTGTGGCATTGTCGCCCAATTCCGGTGAAGGAACATTTCCTTCTCTTCCGCTGT GATTCCACAAAAATGACGGAATTCTACAGTGCATACTATTCACTTAGGTATATGCAGTGC AGGATTAGAAATGTGGTACCAACAAAATAAAAGGGATGGCACATGATGACATGAACAGCA GATACTGTACCAAGTATCAAATCATGTATAAATCAACATTCAGATCTTGTTAGTTCTGC