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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0537100-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:26682661:26684165:1 gene:Os05g0537100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 7 description:WRKY transcription factor 10. (Os05t0537100-00)
Sequence

ATGGCGGCAGTCGGCGCGCACGCAGCGGTCTACCACCACCCGGTCTCGGGCCTCTCGGCG
CCGGCGGGCGACGCCGCCTACTCGATGTCATCGTACTTCTCCCACGGGGGAAGCTCGACC
TCCAGCTCCGCGTCCAGCTTCTCCGCCGCCCTCGCCGCCGCAACGACGCCGCCGCTTCCC
GACCCGTCGGGGTCGCAGTTCGACATCTCCGAGTTCTTCTTCGACGACGCGCCTCCGGCC
GCCGTGTTCAATGGCGCGCCCACCGCCGCGCTGCCGGATGGCGCCGCCGCAAACGCAACA
AGGAGCGCGGCGGAGGCGGTGCCGGCGCCGGCGCCGGCGGCCGTGGAGAGGCCGCGGACG
GAGCGGATCGCGTTCCGGACGAAGTCAGAGATCGAGATTCTTGACGACGGCTACAAGTGG
CGCAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACCCAAGGAACTACTACCGGTGC
TCGACGGAAGGGTGCAACGTGAAGAAGAGGGTGGAGCGGGACAAGGACGACCCGAGCTAC
GTGGTGACGACGTACGAGGGGACGCACAACCACGTGAGCCCCAGCACGGTGTACTACGCC
AGCCAGGACGCCGCCTCCGGCCGCTTCTTCGTCGCCGGCACGCAGCCGCCAGGTTCTCTC
AATTAA

Peptide Sequence

PEP ID

Os05t0537100-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:26682661:26684165:1 gene:Os05g0537100 transcript:Os05t0537100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 7 description:WRKY transcription factor 10. (Os05t0537100-00)
Sequence

MAAVGAHAAVYHHPVSGLSAPAGDAAYSMSSYFSHGGSSTSSSASSFSAALAAATTPPLP
DPSGSQFDISEFFFDDAPPAAVFNGAPTAALPDGAAANATRSAAEAVPAPAPAAVERPRT
ERIAFRTKSEIEILDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKDDPSY
VVTTYEGTHNHVSPSTVYYASQDAASGRFFVAGTQPPGSLN

Transcript Sequence

Transcript ID

Os05t0537100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:26682661:26684165:1 gene:Os05g0537100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 7 description:WRKY transcription factor 10. (Os05t0537100-00)
Sequence

ACATCATCCCCTCATATCCATGCAGATTTAGCGCCAATCCTTATAAATACGGAGCTTTCG
CGCCGGCCTCGTACTCGGCCATGGCGGCAGTCGGCGCGCACGCAGCGGTCTACCACCACC
CGGTCTCGGGCCTCTCGGCGCCGGCGGGCGACGCCGCCTACTCGATGTCATCGTACTTCT
CCCACGGGGGAAGCTCGACCTCCAGCTCCGCGTCCAGCTTCTCCGCCGCCCTCGCCGCCG
CAACGACGCCGCCGCTTCCCGACCCGTCGGGGTCGCAGTTCGACATCTCCGAGTTCTTCT
TCGACGACGCGCCTCCGGCCGCCGTGTTCAATGGCGCGCCCACCGCCGCGCTGCCGGATG
GCGCCGCCGCAAACGCAACAAGGAGCGCGGCGGAGGCGGTGCCGGCGCCGGCGCCGGCGG
CCGTGGAGAGGCCGCGGACGGAGCGGATCGCGTTCCGGACGAAGTCAGAGATCGAGATTC
TTGACGACGGCTACAAGTGGCGCAAGTACGGCAAGAAGTCCGTCAAGAACAGCCCCAACC
CAAGGAACTACTACCGGTGCTCGACGGAAGGGTGCAACGTGAAGAAGAGGGTGGAGCGGG
ACAAGGACGACCCGAGCTACGTGGTGACGACGTACGAGGGGACGCACAACCACGTGAGCC
CCAGCACGGTGTACTACGCCAGCCAGGACGCCGCCTCCGGCCGCTTCTTCGTCGCCGGCA
CGCAGCCGCCAGGTTCTCTCAATTAACCGCGCGCGTACGGTTAATTTGATCGATCGGGTC
AGCCATGGGACTTTTCCAATGCTAGCTAGCTAATAGTGTAGGTGTTCTGGGCCGGATTCT
TGATCGAGATAGCAGCCTCTTGATTGAGATGCCCAGATGGGTCATTTTGGATGTAGCTGG
ATCTTTTTTTCCCCTTTTCTTCTCTCGATCTCTGTCCCGTCCTTTTTGCCTGTTTCGATC
ATTGGAAGGCCGGGCCGGCCTGGCTGGTTTGCAGCGATAGTGATCAAATGCTGTGCTGCT
GTGTTTCTGTGCTCTTGAGGATCCTCCCAACTATCCCCCTTGAGCCTAGGTAATATAGCC
ATGGGAAATGTAACATATATATACTGTTTAACCGTGCAATAAAAATGTACAGAGCTTGAA
ATTTTGGTTGT