Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0536900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26664617:26666561:1 gene:Os05g0536900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab7A1 description:Similar to RAB7A. (Os05t0536900-01)
Sequence	ATGGCGTCGTCGCGGAGGCGGACGCTGCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTG GGGAAGACGTCCCTGATGAACCAATACGTGAACAAGAAGTTTAGCCAGCAGTACAAGGCG ACGATCGGCGCCGATTTCGTCACCAAGGAGGTTCTCATTGAAGACAGGCTTGTCACCTTG CAGATCTGGGACACGGCAGGACAGGAGAGGTTTCAGAGTCTCGGTGTGGCGTTCTACAGA GGTGCAGATTGCTGTATGCTAGTCTACGATGTCAATGCTAAAAGATCTTTCAATGCACTC AACACCTGGCATGATGAGTTCCTCACCCAAGCTAGCCCATCAGATCCCAAACATTTTCCC TTCATATTACTCGGCAACAAGATTGACATAGATGCCGGAAACAGACGTGCCATCCCTGAG AAGAAAGCAAAAGAGTGGTGCGTCTCCAAAGGCAACATTCCGTATTTCGAAACCTCTGCG AAAGACGACTACAATGTTGACAGTGCTTTTCTGTGCATTGCCAAGCTTGCTCTGGAGCAT GAGCATGATCAGGACATCTACTTCAAGACTGTTGCACAACCAGCCCCTGATACTGAACAT ACCAGCGGATGTGCTTGCTAG

Peptide Sequence

PEP ID	Os05t0536900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26664617:26666561:1 gene:Os05g0536900 transcript:Os05t0536900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab7A1 description:Similar to RAB7A. (Os05t0536900-01)
Sequence	MASSRRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTL QIWDTAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFP FILLGNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEH EHDQDIYFKTVAQPAPDTEHTSGCAC

Transcript Sequence

Transcript ID	Os05t0536900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26664617:26666561:1 gene:Os05g0536900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab7A1 description:Similar to RAB7A. (Os05t0536900-01)
Sequence	TCGATCGGTTGTTGCTGGCCATGGCGTCGTCGCGGAGGCGGACGCTGCTCAAGGTCATCG TCCTCGGCGACAGCGGGGTGGGGAAGACGTCCCTGATGAACCAATACGTGAACAAGAAGT TTAGCCAGCAGTACAAGGCGACGATCGGCGCCGATTTCGTCACCAAGGAGGTTCTCATTG AAGACAGGCTTGTCACCTTGCAGATCTGGGACACGGCAGGACAGGAGAGGTTTCAGAGTC TCGGTGTGGCGTTCTACAGAGGTGCAGATTGCTGTATGCTAGTCTACGATGTCAATGCTA AAAGATCTTTCAATGCACTCAACACCTGGCATGATGAGTTCCTCACCCAAGCTAGCCCAT CAGATCCCAAACATTTTCCCTTCATATTACTCGGCAACAAGATTGACATAGATGCCGGAA ACAGACGTGCCATCCCTGAGAAGAAAGCAAAAGAGTGGTGCGTCTCCAAAGGCAACATTC CGTATTTCGAAACCTCTGCGAAAGACGACTACAATGTTGACAGTGCTTTTCTGTGCATTG CCAAGCTTGCTCTGGAGCATGAGCATGATCAGGACATCTACTTCAAGACTGTTGCACAAC CAGCCCCTGATACTGAACATACCAGCGGATGTGCTTGCTAGCACTTTGGATGCTTTTGTT CATTGGCTGAGAATGAAATTATACAATTATAAGTTGTTATGGACTCACAGTGTACAATAA GCTCGCATAAGAAACTGTTACTCGCTTGTGTATCCATTTTTTTAACCTAGGCTGTGTTTA GATCCAAAGTTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTGTCATACATCC