Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0536400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26634885:26640861:-1 gene:Os05g0536400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Delta-1-pyrroline-5-carboxylate dehydrogenase. (Os05t0536400-01)
Sequence	ATGAGCCTCATCCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCC GCGCTCGCCTCCAGGTGGATGCACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATT TCAGGTTCGAGCCCGGCGGAAGTGCAGAATTTTGTGCAGGGCAGTTGGACAACATCTGGT AACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTT CAGGAAGCAGAAATAAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTT CACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCT GCAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTA TCTCCAAAGAGCTATCAGCAAGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAG AACTTTTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCAT CTTGGACAAAGCAGTAATGGTTACCGTTGGCCATATGGTCCGGTTGCAATTATCACACCG TTCAATTTCCCATTGGAGATTCCATTACTGCAACTAATGGGAGCACTGTATATGGGAAAT AAACCTGTCCTCAAAGTTGACAGCAAAGTTAGCATTGTGATGGACCAGATGCTTAGGTTG CTTCACGCATGTGGGATGCCAGCAGAGGATGTGGACTTCATAAATTCTGATGGTATCACG ATGAACAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCACGG ATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTT GACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGAC CAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCAC AAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAG CTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCAC ATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAG AACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTA TCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACAAGGGAGATCTTTGGTCCTTTC CAGGTGGTTACAGAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGG ATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTA CTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAGCAAGGACAACTGGTGCT CCACAGAACCACTGGTTTGGGCCTGCTGGTGATCCAAGAGGTGCAGGGATCGGAACTCCA GAAGCCATTAAACTCGTTTGGTCTTGCCACAGGGAGATCATATATGACATTGGCCCCTTG CCTAAGAACCGGGCACTACCTTCCGCTACATAA

Peptide Sequence

PEP ID	Os05t0536400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26634885:26640861:-1 gene:Os05g0536400 transcript:Os05t0536400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Delta-1-pyrroline-5-carboxylate dehydrogenase. (Os05t0536400-01)
Sequence	MSLILSRRRLAAAVRRSGPAALASRWMHTPPFATVSPQEISGSSPAEVQNFVQGSWTTSG NWNWLVDPLNGEKFIKVAEVQEAEIKPFVESLSNCPKHGLHNPLKAPERYLMYGDISAKA ANMLGQPVVSDFFAKLIQRVSPKSYQQALAEVQVSQKFLENFCGDQVRFLARSFAVPGNH LGQSSNGYRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPVLKVDSKVSIVMDQMLRL LHACGMPAEDVDFINSDGITMNKLLLEANPKMTLFTGSSRIAEKLAADLKGKIKLEDAGF DWKILGPDVQEVDYIAWVCDQDAYACSGQKCSAQSILFMHKNWSSSGLLDKMKSLSERRK LEDLTIGPVLTVTTSSMIEHMKNLLKIPGSKVLFGGEPLENHSIPEIYGAFKPTAVFVPL SEILKSGNFELVTREIFGPFQVVTEYSDDELELVLEACERMNAHLTAAVVSNDPLFLQEV LGRSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPL PKNRALPSAT

Transcript Sequence

Transcript ID	Os05t0536400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26634885:26640861:-1 gene:Os05g0536400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Delta-1-pyrroline-5-carboxylate dehydrogenase. (Os05t0536400-01)
Sequence	AGGACACCCACGCTGCCGCTGCCACTGCACACGCACGCAGCGAGTCGCGACACGAGACCG TACCGTGGAAAGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGCCGGGTC GCCGCGCCGCGCGCGGCCCGAGCTCGCCGATCGAGAGCCATGAGCCTCATCCTTTCCCGG CGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGATG CACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATTTCAGGTTCGAGCCCGGCGGAA GTGCAGAATTTTGTGCAGGGCAGTTGGACAACATCTGGTAACTGGAATTGGCTAGTTGAT CCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAGGAAGCAGAAATAAAGCCA TTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCA GAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGTCAACCT GTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTCCAAAGAGCTATCAGCAA GCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGAACTTTTGTGGAGATCAGGTA CGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATCTTGGACAAAGCAGTAATGGT TACCGTTGGCCATATGGTCCGGTTGCAATTATCACACCGTTCAATTTCCCATTGGAGATT CCATTACTGCAACTAATGGGAGCACTGTATATGGGAAATAAACCTGTCCTCAAAGTTGAC AGCAAAGTTAGCATTGTGATGGACCAGATGCTTAGGTTGCTTCACGCATGTGGGATGCCA GCAGAGGATGTGGACTTCATAAATTCTGATGGTATCACGATGAACAAGCTGCTGTTAGAG GCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCACGGATAGCAGAGAAATTGGCTGCT GATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCA GATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGT GGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGAATTGGTCGTCTAGTGGG CTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGC CCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATA CCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATA TATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGC AATTTTGAGCTTGTGACAAGGGAGATCTTTGGTCCTTTCCAGGTGGTTACAGAGTATTCT GATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATCTGACGGCT GCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGG ACAACATATGCCGGCATCCGAGCAAGGACAACTGGTGCTCCACAGAACCACTGGTTTGGG CCTGCTGGTGATCCAAGAGGTGCAGGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGG TCTTGCCACAGGGAGATCATATATGACATTGGCCCCTTGCCTAAGAACCGGGCACTACCT TCCGCTACATAAATACTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAAT TTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGA AATGGTTGTG