Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0535400-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:26584551:26588134:1 gene:Os05g0535400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Choline/ethanolamine kinase family protein. (Os05t0535400-00)
Sequence

ATGGTGGCGAGCGAGACGAACCAGAAGGCGGCGGCGGCGGGGAGCAGCATCCCGGAGGGG
GCGCGGCAGCTGCTGCACGAGCTGGCGGCGGGGTGGGGCGACGTGGCGGACTGCCGGGCG
CTGGAGGTGGTGCCGCTCAGGGGGGCCATGACCAACGAGGTCTACCAGGCGCGGTGGCCG
CCGGCGGCGGAGGCGGAGGCGGCGGGGAGGAGGGTGCTGGTGAGGGTGTACGGCGAGGGC
GTGGAGTTGTTCTTCGACCGGGAGGCCGAGGTGCGCACGTTCGAGTCCATGTCGCGGCAC
GGCCACGGCCCGCGCCTCCTCGGTCGCTTCCCCAACGGCCGCGTCGAGGAGTTCATCCAC
GCCAGGACACTCTCAGCTGTTGATCTGCGTGATCCAGAGATTTCAGCCATTATAGCCTCA
AAGCTGAGGGAATTCCACAACCTTGATATGCCTGGTCCAAAATCTGTACTCATTTGGGAC
AGACTAAGGAACTGGCTCAAAACTGCCAAGAATTTGTGCCCCTCTGACGAAGCCAAAGAG
TTCTGCTTGGATAGCATGGAGAACGAGATCACTGCGTTGGAAAATGAGCTTTCAGAGGAT
TACCAGTGCGTAGGATTTTGCCACAACGATCTCCAGTATGGAAACATCATGATTGATGAA
GAGACCAAATTGCTGACCATCATTGACTATGAGTATGCAAGTTTTGGTCCAGTTGCTTAT
GACATTGCAAACCATTTCTGCGAGATGGCTGCAGACTACCATTCAGAAAAGCCTCACATA
CTGGACTACACTAAATATCCAGATACTGATGAGCAGAAGCAATTTGTGCAGAGCTACCTG
AGCTCTTCAGGCGAGGAACCTGACGCAGAGAAGGTCAATAATCTGATAAAAAGTATCGAG
AAGTACACCTTGGCAAGCCATCTCATTTGGGCCCTCTGGGGAATAATTTCGGAGCATGTC
AACGATATTGACTTCGACTACATGGGGTATGCGAGGCAGAGGTTCGAGCAGTACTGGCTC
AAGAAGCCTGCAATCCTAACATGTCAGGTCGTTGAATAA

Peptide Sequence

PEP ID

Os05t0535400-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:26584551:26588134:1 gene:Os05g0535400 transcript:Os05t0535400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Choline/ethanolamine kinase family protein. (Os05t0535400-00)
Sequence

MVASETNQKAAAAGSSIPEGARQLLHELAAGWGDVADCRALEVVPLRGAMTNEVYQARWP
PAAEAEAAGRRVLVRVYGEGVELFFDREAEVRTFESMSRHGHGPRLLGRFPNGRVEEFIH
ARTLSAVDLRDPEISAIIASKLREFHNLDMPGPKSVLIWDRLRNWLKTAKNLCPSDEAKE
FCLDSMENEITALENELSEDYQCVGFCHNDLQYGNIMIDEETKLLTIIDYEYASFGPVAY
DIANHFCEMAADYHSEKPHILDYTKYPDTDEQKQFVQSYLSSSGEEPDAEKVNNLIKSIE
KYTLASHLIWALWGIISEHVNDIDFDYMGYARQRFEQYWLKKPAILTCQVVE

Transcript Sequence

Transcript ID

Os05t0535400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:26584551:26588134:1 gene:Os05g0535400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Choline/ethanolamine kinase family protein. (Os05t0535400-00)
Sequence

CGCGCTCCCACGCCCAGATCCCCCTCCCATTTCCGGAAAAGGAAGGAAGATTCCGAGGCG
GCGGAGCGGAAGGGATGGTGGCGAGCGAGACGAACCAGAAGGCGGCGGCGGCGGGGAGCA
GCATCCCGGAGGGGGCGCGGCAGCTGCTGCACGAGCTGGCGGCGGGGTGGGGCGACGTGG
CGGACTGCCGGGCGCTGGAGGTGGTGCCGCTCAGGGGGGCCATGACCAACGAGGTCTACC
AGGCGCGGTGGCCGCCGGCGGCGGAGGCGGAGGCGGCGGGGAGGAGGGTGCTGGTGAGGG
TGTACGGCGAGGGCGTGGAGTTGTTCTTCGACCGGGAGGCCGAGGTGCGCACGTTCGAGT
CCATGTCGCGGCACGGCCACGGCCCGCGCCTCCTCGGTCGCTTCCCCAACGGCCGCGTCG
AGGAGTTCATCCACGCCAGGACACTCTCAGCTGTTGATCTGCGTGATCCAGAGATTTCAG
CCATTATAGCCTCAAAGCTGAGGGAATTCCACAACCTTGATATGCCTGGTCCAAAATCTG
TACTCATTTGGGACAGACTAAGGAACTGGCTCAAAACTGCCAAGAATTTGTGCCCCTCTG
ACGAAGCCAAAGAGTTCTGCTTGGATAGCATGGAGAACGAGATCACTGCGTTGGAAAATG
AGCTTTCAGAGGATTACCAGTGCGTAGGATTTTGCCACAACGATCTCCAGTATGGAAACA
TCATGATTGATGAAGAGACCAAATTGCTGACCATCATTGACTATGAGTATGCAAGTTTTG
GTCCAGTTGCTTATGACATTGCAAACCATTTCTGCGAGATGGCTGCAGACTACCATTCAG
AAAAGCCTCACATACTGGACTACACTAAATATCCAGATACTGATGAGCAGAAGCAATTTG
TGCAGAGCTACCTGAGCTCTTCAGGCGAGGAACCTGACGCAGAGAAGGTCAATAATCTGA
TAAAAAGTATCGAGAAGTACACCTTGGCAAGCCATCTCATTTGGGCCCTCTGGGGAATAA
TTTCGGAGCATGTCAACGATATTGACTTCGACTACATGGGGTATGCGAGGCAGAGGTTCG
AGCAGTACTGGCTCAAGAAGCCTGCAATCCTAACATGTCAGGTCGTTGAATAAGCACCTG
CATAACATCACCAGGTTCTACCTTGATGGATATCCACCGGCCGCTGCACATAG