Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0531400-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:26377197:26378671:1 gene:Os05g0531400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531400-01)
Sequence

ATGGCGAATTCGATCGCGATGGCACTGTTGTTCGTCAAGTCGTTCGTTGTACTCTCGCTC
GCCGCCGTGCTGCTCGCTCTCGACGGCGGCGGCGGCGCCTCCGCCATGGGCCTGCCCCCG
CCGCCGCCGACGGTGAACTTCAGCATCGGCGTGCAGGGCATGGTGTGGTGCAAGACCTGC
AGGTACCCCGGCTACCTCGCCGCCATGGACGCGTCCCCGCTCGCAGGAGCGGTGGCGTAC
CTGCGTTGCCGGCACGGGCACCGGCGGGTGGCGTCGATCAGGGGGGTGGCCGGGAGCGGC
GGCTACTTCCGGATCGAGACGTCGCAGCTGACGTCGTTCACGAGCCAGGAGTGCAGGGTG
TACGTGCCCCGGTCGCCGTCGCGCGCGTGCGCCGTCCCCGGCCACGGCAGGAGGGGCCTG
CCGCTCAAGTTCGAGGAGTTCGTCAAGCGCGACAATGGCCTCCAGGGCCTCTACTCCGTC
GGCAACTTCGTCTTCTCCCCCAAATACCCCAACAAGTGCTACTGA

Peptide Sequence

PEP ID

Os05t0531400-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:26377197:26378671:1 gene:Os05g0531400 transcript:Os05t0531400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531400-01)
Sequence

MANSIAMALLFVKSFVVLSLAAVLLALDGGGGASAMGLPPPPPTVNFSIGVQGMVWCKTC
RYPGYLAAMDASPLAGAVAYLRCRHGHRRVASIRGVAGSGGYFRIETSQLTSFTSQECRV
YVPRSPSRACAVPGHGRRGLPLKFEEFVKRDNGLQGLYSVGNFVFSPKYPNKCY

Transcript Sequence

Transcript ID

Os05t0531400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:26377197:26378671:1 gene:Os05g0531400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531400-01)
Sequence

GTCTTCGCAACGTATCCTAGTTAACCCAAGTGTTTAATTCTGTCTGTATACTATACCATA
TCTTACCAGACTAGATCTTGCTTAGCTAGCTAGCGAATTAGTGTCGTCTTCTAGCTAGTT
ATTACGTATTCTTGTGTGGATTACGTTGACTAATTAATGGCGAATTCGATCGCGATGGCA
CTGTTGTTCGTCAAGTCGTTCGTTGTACTCTCGCTCGCCGCCGTGCTGCTCGCTCTCGAC
GGCGGCGGCGGCGCCTCCGCCATGGGCCTGCCCCCGCCGCCGCCGACGGTGAACTTCAGC
ATCGGCGTGCAGGGCATGGTGTGGTGCAAGACCTGCAGGTACCCCGGCTACCTCGCCGCC
ATGGACGCGTCCCCGCTCGCAGGAGCGGTGGCGTACCTGCGTTGCCGGCACGGGCACCGG
CGGGTGGCGTCGATCAGGGGGGTGGCCGGGAGCGGCGGCTACTTCCGGATCGAGACGTCG
CAGCTGACGTCGTTCACGAGCCAGGAGTGCAGGGTGTACGTGCCCCGGTCGCCGTCGCGC
GCGTGCGCCGTCCCCGGCCACGGCAGGAGGGGCCTGCCGCTCAAGTTCGAGGAGTTCGTC
AAGCGCGACAATGGCCTCCAGGGCCTCTACTCCGTCGGCAACTTCGTCTTCTCCCCCAAA
TACCCCAACAAGTGCTACTGATCCATTGATCCATGTTGGTGTGTTCGATCGTCGTCGTCG
CCAAGATCAGAGACCGGGCCTGAATAAATCGATCGGCTAGGCTAATTAATTCATTGACTC
GATCTTGCATGGGGAGATGAATTAGTTGCTGTGGTACGTAGTTAGTGCTGGTTTTGCATT
GGTTTACGATGCTTATATGGTAGAGGAGTATGGCTGTAATAATCAAGATGTTATGCAATT
GAGACAGCTTGTATGTTTATTTCGCTATCGTTTAATTTTCTCTGTAACCTTGTTCTTCC