Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0531200-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:26371597:26372835:1 gene:Os05g0531200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531200-01);Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531200-02)
Sequence

ATGGTGTCCTCCAAGATCCACTGCGCCATGGCCGCGCTGCTCCTTGCAATTCTCCTCCCG
GTTTCTCATGCGTCGGGGAGGTATGTAGCTCCGGCTCCGGCTCCTGTTCCTGTTCCTCCG
CCGCCGCGCACCTCGCCGCCGAGCCGTATCCAGCCGGTCGTCGTCGTCCAGGGCACAATC
TACTGCAAGTCCTGCAACCTCAGCGGCTACAACCGCTACATGGACGCGTCTCCCCTACCA
AATGCGACGGCGCAGCTGGTGTGCTACGGGGACAAGGTGCTGAACATGACGAGCACGGCG
ACGGACAAGAACGGCTACTTCCTGGTGATGGTGTACAGGCTGGACGTGTTCCGGCGGAGC
AGGTGCCGGGTCTACCTGGGCTCGTCGCCGTCGCCGCTGTGCGCGGCGCCGTTCATCCCG
TCGAACAAGTGGCTGGGGCTCACGCTGGAGAGGGAGAGGGTGGCGTCGCTGCCCAAGGGC
GTCCGCGGCGTGTACCGCCCCAAGAGCACGCTCATGTTCGGCCCCGGCACCGGCGGCAAG
TGCCCGGCCGCCGCCGCCGCCGACGCCGCCGGCGTGCCGATGATGTGA

Peptide Sequence

PEP ID

Os05t0531200-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:26371597:26372835:1 gene:Os05g0531200 transcript:Os05t0531200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531200-01);Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531200-02)
Sequence

MVSSKIHCAMAALLLAILLPVSHASGRYVAPAPAPVPVPPPPRTSPPSRIQPVVVVQGTI
YCKSCNLSGYNRYMDASPLPNATAQLVCYGDKVLNMTSTATDKNGYFLVMVYRLDVFRRS
RCRVYLGSSPSPLCAAPFIPSNKWLGLTLERERVASLPKGVRGVYRPKSTLMFGPGTGGK
CPAAAAADAAGVPMM

Transcript Sequence

Transcript ID

Os05t0531200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:26371597:26372835:1 gene:Os05g0531200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531200-01);Pollen Ole e 1 allergen and extensin domain containing protein. (Os05t0531200-02)
Sequence

ACACTCGATCAGTACTGCTCATTTTTTCAGTTCCACTCGAGCTAAGTGCGGTACACTGAT
CAACGATGGTGTCCTCCAAGATCCACTGCGCCATGGCCGCGCTGCTCCTTGCAATTCTCC
TCCCGGTTTCTCATGCGTCGGGGAGGTATGTAGCTCCGGCTCCGGCTCCTGTTCCTGTTC
CTCCGCCGCCGCGCACCTCGCCGCCGAGCCGTATCCAGCCGGTCGTCGTCGTCCAGGGCA
CAATCTACTGCAAGTCCTGCAACCTCAGCGGCTACAACCGCTACATGGACGCGTCTCCCC
TACCAAATGCGACGGCGCAGCTGGTGTGCTACGGGGACAAGGTGCTGAACATGACGAGCA
CGGCGACGGACAAGAACGGCTACTTCCTGGTGATGGTGTACAGGCTGGACGTGTTCCGGC
GGAGCAGGTGCCGGGTCTACCTGGGCTCGTCGCCGTCGCCGCTGTGCGCGGCGCCGTTCA
TCCCGTCGAACAAGTGGCTGGGGCTCACGCTGGAGAGGGAGAGGGTGGCGTCGCTGCCCA
AGGGCGTCCGCGGCGTGTACCGCCCCAAGAGCACGCTCATGTTCGGCCCCGGCACCGGCG
GCAAGTGCCCGGCCGCCGCCGCCGCCGACGCCGCCGGCGTGCCGATGATGTGATGAGACG
ATCGATATTGACATGGAGAATTCGAGATGTGCGTTCACGCATATCGCCAATTTAGTTAGT
GGTTTGGTTGGATGATGCATGGTTTAATTAAGTTCGTGCACGTTATTTGGAATTAATAAT
GGGTAGAAATTAGCTAGCTCGTCTTTTGGTCGATGGAGCATTTGTTGTAACCTTGTAGTA
GCTCGTCGCTTAGGTTTGCAGTGGTTTTAGTTCGCTCGTCAGTGTAATGTCATGAGAAAA
AAAATTATCTGAGTACGTCTATCCTTTCGGTCGATTT