Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0530400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:26344418:26346857:1 gene:Os05g0530400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 7 description:Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10). (Os05t0530400-01)
Sequence	ATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCGCCGCCG TTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTGTCGTGG GGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGACCTGTTG CCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGGT TTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGAGGGCAC ACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTCCAGAAC CAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATCAACCGG CTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTAC GTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAG AAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGC TCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTC GTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACG GATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTT GAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCT GCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCT GAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTC CATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAG TCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCAT GTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACT TCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGG GAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCT CCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTT GATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGA

Peptide Sequence

PEP ID	Os05t0530400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:26344418:26346857:1 gene:Os05g0530400 transcript:Os05t0530400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 7 description:Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10). (Os05t0530400-01)
Sequence	MESSNLGGGGGGGGGGGPPPFLIKTYEMVEDAATNHVVSWGPGGASFVVWNPLDFSRDLL PKYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFIRGHTHLLKNIHRRKPVHSHSLQN QINGPLAESERRELEEEINRLKYEKSILVADLQRQNQQQYVINWQMQAMEGRLVAMEQRQ KNIVASLCEMLQRRGGAVSSSLLESDHFSKKRRVPKMDLFVDDCAAGEEQKVFQFQGIGT DAPAMPPVLPVTNGEAFDRVELSLVSLEKLFQRANDACTAAEEMYSHGHGGTEPSTAICP EEMNTAPMETGIDLQLPASLHPSSPNTGNAHLHLSTELTESPGFVQSPELPMAEIREDIH VTRYPTQADVNSEIASSTDTSQDGTSETEASHGPTNDVFWERFLTETPRSCLDESERQES PKDDVKAELGCNGFHHREKVDQITEQMGHLASAEQTLHT

Transcript Sequence

Transcript ID	Os05t0530400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26344418:26346857:1 gene:Os05g0530400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 7 description:Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10). (Os05t0530400-01)
Sequence	ACGGCTGCACGCCCTGCACCCGTTGCCACCACCACCGCCTTCTCCGCCGCGCCGCCTCCT CTCGCGTCTCCCGCTCGTGCAGGGCGCGCGTCGTCGGGCGAGCTGCTGCCGTCTCCGTGG CCGTGGCTGATCAGAACTAGTTGGCGTTCGATCGGAAAGTCGCTGTCTTTTGGCGACTCG GTGAGAATTTGCGCCGCGGTTCAATGTGAAAAATTTTGGCCCGTGGCGAGTTGGATTTGG CGCCGAGTCCATTCAGGTGGTTAAGACTTGTTCGTGGGAGAGCGAAGCTGCGCGCGTTAA GACCGGGCTCCGTTCTTGCATCGTGCAGAGCAGCTGCTGGTTTGAGAATTGAGAGGCGCG GTTGACATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCG CCGCCGTTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTG TCGTGGGGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGAC CTGTTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACC TACGGTTTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGA GGGCACACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTC CAGAACCAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATC AACCGGCTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAG CAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAA CGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTG TCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGAT CTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATT GGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGAC AGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGC ACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATA TGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCT AGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTC ACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGAT ATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACT GATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTG TTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAA GAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAG AAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCAT ACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATG TAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTT ATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTATCCGCTGACTACTGTGC ATAAATTTTTTTTAGTAGACCATATCCATTTTTGTACTCC