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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0526600-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:26186333:26187544:1 gene:Os05g0526600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0526600-00)
Sequence

ATGGCGTCGTTCCTCGACTCGTTCTCCTCGCTCGGCGTCGGGTACGCGGTCGCCATCGCG
CTCGGCTTCCTCGTCCTCCTCGCGTCGCTGCTCCTCGCCTTCTACTTCTGCTCCCGCCGC
GGCGGGGCCGGGGTCGTCCGCCGCGGCGGCGGCCAGGGGGTCCACTCCGCGCGCCACGCC
GTGTCCTCCGCGTCCAGCTCCGGGCACATCTCCATCACCGTCCCGCGGGTCATCTTCGTC
GCGGACGACTCCGACTCCCCGGGCTCCTCGTCCCGCGGCGGCGCCGGGGGCGGCGCGGCG
TCGTCGCCCGTCGGGCTCGACCCCGCGGTGATCGCCTCGTACCCCAAGGTGCCCTTCTCT
AGGGCGGCGACGGGGGCGGACGCCGAGGCCGCGTGCTCGATCTGCCTCTGCGAGTACAAG
GAAGGGGAGATGCAGCGCATGATGCCCGAGTGCAGGCACAGGTTCCACCTCATGTGCCTG
GACGCGTGGCTGCGGCGGAGCGCGTCGTGCCCGGTCTGCCGGTCCTCGCCCATCCCCACT
CCAGTCTCCACTCCGCTCGCCACCCCGCTGTCGGAGCTCGTCCCGCTATCACAGTACGCC
GCCGACCGCCGGCGCCACAGGTGA

Peptide Sequence

PEP ID

Os05t0526600-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:26186333:26187544:1 gene:Os05g0526600 transcript:Os05t0526600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0526600-00)
Sequence

MASFLDSFSSLGVGYAVAIALGFLVLLASLLLAFYFCSRRGGAGVVRRGGGQGVHSARHA
VSSASSSGHISITVPRVIFVADDSDSPGSSSRGGAGGGAASSPVGLDPAVIASYPKVPFS
RAATGADAEAACSICLCEYKEGEMQRMMPECRHRFHLMCLDAWLRRSASCPVCRSSPIPT
PVSTPLATPLSELVPLSQYAADRRRHR

Transcript Sequence

Transcript ID

Os05t0526600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:26186333:26187544:1 gene:Os05g0526600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0526600-00)
Sequence

GCGCGGCACGGCGCGCGTCCTGCACTCCAGCTCCGCGCCATAACTGCGATCCCCTCCTCC
TCGGCCTCCCCCTCCTCACCGGCAATTAATGCCGCCAACTACCAGATCCACCCCTCCGGA
AACCTAAAACAAAATACCCCTCTTCCCGTTTTGCCCCTCCTCGGCTCTTCTCCCACCCCA
GCCGCGCCCCCCCGCACGCCATGCCATTCCGCCCCACGGTCTCGCCGCCGCCACCGCCGC
CGCCGTCATGGCGTCGTTCCTCGACTCGTTCTCCTCGCTCGGCGTCGGGTACGCGGTCGC
CATCGCGCTCGGCTTCCTCGTCCTCCTCGCGTCGCTGCTCCTCGCCTTCTACTTCTGCTC
CCGCCGCGGCGGGGCCGGGGTCGTCCGCCGCGGCGGCGGCCAGGGGGTCCACTCCGCGCG
CCACGCCGTGTCCTCCGCGTCCAGCTCCGGGCACATCTCCATCACCGTCCCGCGGGTCAT
CTTCGTCGCGGACGACTCCGACTCCCCGGGCTCCTCGTCCCGCGGCGGCGCCGGGGGCGG
CGCGGCGTCGTCGCCCGTCGGGCTCGACCCCGCGGTGATCGCCTCGTACCCCAAGGTGCC
CTTCTCTAGGGCGGCGACGGGGGCGGACGCCGAGGCCGCGTGCTCGATCTGCCTCTGCGA
GTACAAGGAAGGGGAGATGCAGCGCATGATGCCCGAGTGCAGGCACAGGTTCCACCTCAT
GTGCCTGGACGCGTGGCTGCGGCGGAGCGCGTCGTGCCCGGTCTGCCGGTCCTCGCCCAT
CCCCACTCCAGTCTCCACTCCGCTCGCCACCCCGCTGTCGGAGCTCGTCCCGCTATCACA
GTACGCCGCCGACCGCCGGCGCCACAGGTGACGGAATTGGTATATTTAGCCATTTAGGTG
AGATTGTGGACTAGGACAGCCTTGACTTTGAGGAAGTTTTGCTTAGTAGCAGTAGATCGT
TGCACTGAAGCAGACATGCAGTGTATATACATTGTTTTTTCCATTCGGATATAGTAGCTT
TTACCAAGTAAGGTTACTTGCCCTACAGTTGTATGTGCAAGATCAATATCTGAATTGCTT
CATTCCA