Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0524400-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:26107382:26112359:1 gene:Os05g0524400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructokinase 5 description:Phosphofructokinase family protein. (Os05t0524400-01);Phosphofructokinase family protein. (Os05t0524400-02)
Sequence	ATGGCGTCCTCCCACATCATCCTTCCGCCGGACGACGACGACGAGGAGCAGCGCCGGCTG GAGGAGGAGGAGGACGAGGATCCGTGGGCGCGGAGCGGGCCTCCCCCCGCGGCGCCGGAG CACGCGATGAAGGCGGCGCTGCCGTTCTCCGCGACGTGCGTGCGGATCTCCCGCGACTCC TACCCCAACCTCCGCGCCCTCCGCAACGCCTCCTCCGTCAGCCTCGCCGACGCCGCCTAC GTGAAGATCTCCGAGGGGGACTTCGGCTACGTCCTCGACGACGTGCCGCACCTCGTCGAC CACCTCCCCGATGCCCCCACTTATCCCAATCCACTACAAGATCATCCAGCCTATTCAACT GTCAAGCAATATTTTGTTAATGAAGATGACACTGTACCCCAAAAGGTGGTCGTTCAGAAG AACAGCCGGCGGGGGGTTCACTTCCGTCGTGCTGGACCTCGTCAGAAGGTTTATTTTGAG TCAGATGAAGTGAAAGCATGCATTGTAACTTGTGGAGGCCTTTGCCCTGGTCTTAACACT GTCATCAGAGAGCTCGTCTGTGGTTTGGCGCACATGTATAATGTCAGCAAAATCTATGGT ATACAGAATGGATACAAGGGCTTCTATTCTAGCAATTACCTTACTCTGACGCCAAAGAGT GTCGATGACATCCACAAGAGGGGTGGGACAGTTCTTGGCACATCACGAGGTGGCCATGAT ACAAAAAAGATTGTTGACAACATTCAGGATCGTGGAATTAATCAGGTCTATATCATTGGA GGAGATGGAACACAGAAGGGTGCATATGAGATCTTCAAGGAAATCCGAAAACGTGGGCTA AAGGTTTCTGTTGCTGGGATTCCCAAGACAATAGATAATGACATAGCGATCATTGACAAG TCATTTGGTTTTGATACGGCCGTAGAAGAGGCCCAGCGTGCCATTGATTCAGCTCATGTG GAAGCTTGCAGTGCTGAGAATGGAATAGGCTTAGTAAAACTGATGGGCCGTTATAGTGGG TTCATTGCAATGTATGCTACTCTTGCAAGTCGAGATGTGGACTGCTGCTTAATTCCAGAG TCCCCATTTTATATGGATGGTGAAGGTGGGTTGCTTCAATATGTAGAGAGAAGGCTGAAA GAGAACAAGCACATGGTTATTGTTGTTGCTGAGGGAGCAGGGCAGGATCTTATAGCCAAA AGTTTATCTACTTCTGAGCAGCAAGATGCATCAGGAAATAAGCTACTGCTTGATATTGGT CTTTGGCTGACTCACAAGATAAAGGACCACTTCAAGAGCAAAAAGATGGAGATGACTATT AAATATATAGATCCTACCTACATGATCCGAGCTATTCCAAGCAATGCATCAGACAATGTC TACTGCACGCTGCTGGCCCACAGTGCTATTCATGGTGCAATGGCCGGCTATAGCTTCACT GTTGGAAATGTCAACGGCAGACATGCCTACATACCTTTCTATAGGGTGACATCCACACGG AACAAGGTCAAGATCACTGATAGGATGTGGGCGAGGCTGCTATCATCAACCAACCAGCCA AGCTTCCTAAGCCAGAAGGACATCGACGAAGCCAAAGAGAACGATAGGACGGCCAACAAG CCACCACTTCCCACCGGCCTCAGCCATCATGTGGCAAACTCTTTCGACCAGTCTGCATCA TCTTCGTCGAACAGCCAGATATGA

Peptide Sequence

PEP ID	Os05t0524400-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:26107382:26112359:1 gene:Os05g0524400 transcript:Os05t0524400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructokinase 5 description:Phosphofructokinase family protein. (Os05t0524400-01);Phosphofructokinase family protein. (Os05t0524400-02)
Sequence	MASSHIILPPDDDDEEQRRLEEEEDEDPWARSGPPPAAPEHAMKAALPFSATCVRISRDS YPNLRALRNASSVSLADAAYVKISEGDFGYVLDDVPHLVDHLPDAPTYPNPLQDHPAYST VKQYFVNEDDTVPQKVVVQKNSRRGVHFRRAGPRQKVYFESDEVKACIVTCGGLCPGLNT VIRELVCGLAHMYNVSKIYGIQNGYKGFYSSNYLTLTPKSVDDIHKRGGTVLGTSRGGHD TKKIVDNIQDRGINQVYIIGGDGTQKGAYEIFKEIRKRGLKVSVAGIPKTIDNDIAIIDK SFGFDTAVEEAQRAIDSAHVEACSAENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPE SPFYMDGEGGLLQYVERRLKENKHMVIVVAEGAGQDLIAKSLSTSEQQDASGNKLLLDIG LWLTHKIKDHFKSKKMEMTIKYIDPTYMIRAIPSNASDNVYCTLLAHSAIHGAMAGYSFT VGNVNGRHAYIPFYRVTSTRNKVKITDRMWARLLSSTNQPSFLSQKDIDEAKENDRTANK PPLPTGLSHHVANSFDQSASSSSNSQI

Transcript Sequence

Transcript ID	Os05t0524400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:26107382:26112359:1 gene:Os05g0524400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructokinase 5 description:Phosphofructokinase family protein. (Os05t0524400-01);Phosphofructokinase family protein. (Os05t0524400-02)
Sequence	ACTTGCTCTTCTCATGGCGTCCTCCCACATCATCCTTCCGCCGGACGACGACGACGAGGA GCAGCGCCGGCTGGAGGAGGAGGAGGACGAGGATCCGTGGGCGCGGAGCGGGCCTCCCCC CGCGGCGCCGGAGCACGCGATGAAGGCGGCGCTGCCGTTCTCCGCGACGTGCGTGCGGAT CTCCCGCGACTCCTACCCCAACCTCCGCGCCCTCCGCAACGCCTCCTCCGTCAGCCTCGC CGACGCCGCCTACGTGAAGATCTCCGAGGGGGACTTCGGCTACGTCCTCGACGACGTGCC GCACCTCGTCGACCACCTCCCCGATGCCCCCACTTATCCCAATCCACTACAAGATCATCC AGCCTATTCAACTGTCAAGCAATATTTTGTTAATGAAGATGACACTGTACCCCAAAAGGT GGTCGTTCAGAAGAACAGCCGGCGGGGGGTTCACTTCCGTCGTGCTGGACCTCGTCAGAA GGTTTATTTTGAGTCAGATGAAGTGAAAGCATGCATTGTAACTTGTGGAGGCCTTTGCCC TGGTCTTAACACTGTCATCAGAGAGCTCGTCTGTGGTTTGGCGCACATGTATAATGTCAG CAAAATCTATGGTATACAGAATGGATACAAGGGCTTCTATTCTAGCAATTACCTTACTCT GACGCCAAAGAGTGTCGATGACATCCACAAGAGGGGTGGGACAGTTCTTGGCACATCACG AGGTGGCCATGATACAAAAAAGATTGTTGACAACATTCAGGATCGTGGAATTAATCAGGT CTATATCATTGGAGGAGATGGAACACAGAAGGGTGCATATGAGATCTTCAAGGAAATCCG AAAACGTGGGCTAAAGGTTTCTGTTGCTGGGATTCCCAAGACAATAGATAATGACATAGC GATCATTGACAAGTCATTTGGTTTTGATACGGCCGTAGAAGAGGCCCAGCGTGCCATTGA TTCAGCTCATGTGGAAGCTTGCAGTGCTGAGAATGGAATAGGCTTAGTAAAACTGATGGG CCGTTATAGTGGGTTCATTGCAATGTATGCTACTCTTGCAAGTCGAGATGTGGACTGCTG CTTAATTCCAGAGTCCCCATTTTATATGGATGGTGAAGGTGGGTTGCTTCAATATGTAGA GAGAAGGCTGAAAGAGAACAAGCACATGGTTATTGTTGTTGCTGAGGGAGCAGGGCAGGA TCTTATAGCCAAAAGTTTATCTACTTCTGAGCAGCAAGATGCATCAGGAAATAAGCTACT GCTTGATATTGGTCTTTGGCTGACTCACAAGATAAAGGACCACTTCAAGAGCAAAAAGAT GGAGATGACTATTAAATATATAGATCCTACCTACATGATCCGAGCTATTCCAAGCAATGC ATCAGACAATGTCTACTGCACGCTGCTGGCCCACAGTGCTATTCATGGTGCAATGGCCGG CTATAGCTTCACTGTTGGAAATGTCAACGGCAGACATGCCTACATACCTTTCTATAGGGT GACATCCACACGGAACAAGGTCAAGATCACTGATAGGATGTGGGCGAGGCTGCTATCATC AACCAACCAGCCAAGCTTCCTAAGCCAGAAGGACATCGACGAAGCCAAAGAGAACGATAG GACGGCCAACAAGCCACCACTTCCCACCGGCCTCAGCCATCATGTGGCAAACTCTTTCGA CCAGTCTGCATCATCTTCGTCGAACAGCCAGATATGAACTCCATCATGTGGCAAACCCTT TCGACCAGTCTGCGTCATCGTCCTCGAACAGCGAGATGAATCCAATCTGTAGTTCTATAT AGAAGCTGTTGCTATTCCCGTTGAGAAACCTGGGCCACGCTACGCAGTTTTGATTTAATA TGCATAATATCACCTGTATGAATCCACGGATACTCTCCTGGATTGCTGGTAACTACAAGC GTAATAAGAAAAGCGCTATTGATG