Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0521500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25942435:25947899:1 gene:Os05g0521500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase S16, lon N-terminal domain containing protein. (Os05t0521500-01)
Sequence	ATGGCGGACTGGGACGGGGTCCCGGCGAGGGAGCGGCGGCAGATGGAGGAGATCCTGCAG CTCGATATGGAGGAGCTCAACGTGGAGATGGTCAACGACGACGGCTCCTCCTCCGAGGAG GCGAACGGCGGCGACGACGGCGCCGACGCCTTCCTCAGGGAAGGAGTGGCTAGCACTTCT GGACAATTCACATTCAACACATCTCTAGCCTCGTTGCACACCTATCTTGGTGAGGTTGAT GATACACGGGGTCGAGTTTCTCTCTTAGATGGTGGCACAATCCTCAGCTTGCCAATGCTA TATCTTCAAGGTGTTGTCCTATTTCCTGGAGCTACCCTGCCTCTCAGACTAATTCAGGGT AGATTTGTAGCAGCTGTTGAGAAAGCTTTGAGGCAGGTCGATGCTCCATGCACAATTGGT GTGGTTCTCATGTACAAGCGACACAGTACTCGACATTATGCTAATGCTTCAGTTGGAACA ACAGCCGAGATAAGACAACTTGGGAGGATGGATGATGGTTCATTAAATGTTGTAGCCCGT GGGCAGCAAAGATTTCGTCTGAAGCGTCATTGGATGGATGTTGATGGGGTGGTGTGGGGT GATGTCCAAATCATTGAAGAAGATACTCCTTTAAGAACCCCAAGGGATGCATTTGCACAG CTAGCATCATGTAACAGTTTACGGCAGCATACCTCCTCACCAGTTATCAGTTTGGATGTC TCTCCAATCAAACAACGGGATCATGTGGATTCAGAATTGGATTGTGGTACACCATCACCT AAAAGCACTGCAAGCAATCATTCAGCGATTGATTCAAGGATGTGCCATTCAGATTCACGA TCCAGCAGTTCAATGAGATCTTCTAATGAAGATGGGATTTTCATGCATGAGCAGTTTTAC AGCCAGGAGCTACATCCTTTAAAAGGAAGTGCAGCAGTTCAGTCAGGCGAGAATACCAAC ATGGGTGAGGAGGATTTTTGTTTAACATCGCTCAGATCCTTGTCAAGTGCAGGAACAAGA GATACTAAGGAGCAGCGTCAGTACATTCTTCCAAAGCAACATTTTCAGGCACCATTATCA TTTTGGCCTCGGTGGGCTTATCAAATGTACGATTCATATGCACTTGCTCGTAGGGCTGCA GACCTCTGGAGACAGATAATCACACACCCAAGCATGGATGATTACGTGAGAAAACCAGAT CTTCTGTCATTTTCCATTGGAAGCAAACTTCCTGTATCAGAATCTGTGAGACAAAAGCTA CTGGAGATTGATGGAATCTCGTATCGTCTTCGAAGGGAGATTCAGCTTCTCAAGGCCTTT AATCTCATAAAATGTAGATGCTGCAAGTCTCTCATAGCAAAGCGTAGCGACATGGTAGTG ATGTCTACTGATGGTCCTCTTGGTGCGTATGTCAATCCTCACGGTTTTGTCCATGAAACA ATCACAGTTAGCAGGGCAACTGGGCTTGCTCTTGATGGCAATCCTTCAACGGTTCACAGC TGGTTTCCAGGATACTCGTGGACGATTGCATCATGTACGGACTGTGAGTCCAACATAGGC TGGTTGTTCAAAGCAACCAAGAAGAATCTGCGACCGAGATCCTTCTGGGGGATCCGTAGC TCCCAAATTGCAGATGATGCACAAGAACTAGATCAGGACGAATGA

Peptide Sequence

PEP ID	Os05t0521500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25942435:25947899:1 gene:Os05g0521500 transcript:Os05t0521500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase S16, lon N-terminal domain containing protein. (Os05t0521500-01)
Sequence	MADWDGVPARERRQMEEILQLDMEELNVEMVNDDGSSSEEANGGDDGADAFLREGVASTS GQFTFNTSLASLHTYLGEVDDTRGRVSLLDGGTILSLPMLYLQGVVLFPGATLPLRLIQG RFVAAVEKALRQVDAPCTIGVVLMYKRHSTRHYANASVGTTAEIRQLGRMDDGSLNVVAR GQQRFRLKRHWMDVDGVVWGDVQIIEEDTPLRTPRDAFAQLASCNSLRQHTSSPVISLDV SPIKQRDHVDSELDCGTPSPKSTASNHSAIDSRMCHSDSRSSSSMRSSNEDGIFMHEQFY SQELHPLKGSAAVQSGENTNMGEEDFCLTSLRSLSSAGTRDTKEQRQYILPKQHFQAPLS FWPRWAYQMYDSYALARRAADLWRQIITHPSMDDYVRKPDLLSFSIGSKLPVSESVRQKL LEIDGISYRLRREIQLLKAFNLIKCRCCKSLIAKRSDMVVMSTDGPLGAYVNPHGFVHET ITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNLRPRSFWGIRS SQIADDAQELDQDE

Transcript Sequence

Transcript ID	Os05t0521500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25942435:25947899:1 gene:Os05g0521500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase S16, lon N-terminal domain containing protein. (Os05t0521500-01)
Sequence	ACAGAAAGCTGGGCCTCGACCCGGCCCAGAAAGGAAGGAAGGGGAAACCAACCCAAATCT CGCTTGCGCGTCAGGCCGGCGTCTCCGTGATTCTCCCCGTCCCGCGGCGCACCGGCACCG GCACCGGCACCGGCGGCGAGATGGCGGACTGGGACGGGGTCCCGGCGAGGGAGCGGCGGC AGATGGAGGAGATCCTGCAGCTCGATATGGAGGAGCTCAACGTGGAGATGGTCAACGACG ACGGCTCCTCCTCCGAGGAGGCGAACGGCGGCGACGACGGCGCCGACGCCTTCCTCAGGG AAGGAGTGGCTAGCACTTCTGGACAATTCACATTCAACACATCTCTAGCCTCGTTGCACA CCTATCTTGGTGAGGTTGATGATACACGGGGTCGAGTTTCTCTCTTAGATGGTGGCACAA TCCTCAGCTTGCCAATGCTATATCTTCAAGGTGTTGTCCTATTTCCTGGAGCTACCCTGC CTCTCAGACTAATTCAGGGTAGATTTGTAGCAGCTGTTGAGAAAGCTTTGAGGCAGGTCG ATGCTCCATGCACAATTGGTGTGGTTCTCATGTACAAGCGACACAGTACTCGACATTATG CTAATGCTTCAGTTGGAACAACAGCCGAGATAAGACAACTTGGGAGGATGGATGATGGTT CATTAAATGTTGTAGCCCGTGGGCAGCAAAGATTTCGTCTGAAGCGTCATTGGATGGATG TTGATGGGGTGGTGTGGGGTGATGTCCAAATCATTGAAGAAGATACTCCTTTAAGAACCC CAAGGGATGCATTTGCACAGCTAGCATCATGTAACAGTTTACGGCAGCATACCTCCTCAC CAGTTATCAGTTTGGATGTCTCTCCAATCAAACAACGGGATCATGTGGATTCAGAATTGG ATTGTGGTACACCATCACCTAAAAGCACTGCAAGCAATCATTCAGCGATTGATTCAAGGA TGTGCCATTCAGATTCACGATCCAGCAGTTCAATGAGATCTTCTAATGAAGATGGGATTT TCATGCATGAGCAGTTTTACAGCCAGGAGCTACATCCTTTAAAAGGAAGTGCAGCAGTTC AGTCAGGCGAGAATACCAACATGGGTGAGGAGGATTTTTGTTTAACATCGCTCAGATCCT TGTCAAGTGCAGGAACAAGAGATACTAAGGAGCAGCGTCAGTACATTCTTCCAAAGCAAC ATTTTCAGGCACCATTATCATTTTGGCCTCGGTGGGCTTATCAAATGTACGATTCATATG CACTTGCTCGTAGGGCTGCAGACCTCTGGAGACAGATAATCACACACCCAAGCATGGATG ATTACGTGAGAAAACCAGATCTTCTGTCATTTTCCATTGGAAGCAAACTTCCTGTATCAG AATCTGTGAGACAAAAGCTACTGGAGATTGATGGAATCTCGTATCGTCTTCGAAGGGAGA TTCAGCTTCTCAAGGCCTTTAATCTCATAAAATGTAGATGCTGCAAGTCTCTCATAGCAA AGCGTAGCGACATGGTAGTGATGTCTACTGATGGTCCTCTTGGTGCGTATGTCAATCCTC ACGGTTTTGTCCATGAAACAATCACAGTTAGCAGGGCAACTGGGCTTGCTCTTGATGGCA ATCCTTCAACGGTTCACAGCTGGTTTCCAGGATACTCGTGGACGATTGCATCATGTACGG ACTGTGAGTCCAACATAGGCTGGTTGTTCAAAGCAACCAAGAAGAATCTGCGACCGAGAT CCTTCTGGGGGATCCGTAGCTCCCAAATTGCAGATGATGCACAAGAACTAGATCAGGACG AATGATGCTCCGTGTACAGTAGTAAACTTTGTGTGCCCCTCCCTTTTTCTTATGAAGTTA TGGAAAACACTTTATTCTCTGGTCCATAGGCCTAGTTCTCCGTACCTGAGTAGTGGTCGT TGTGACGATCGCTATAGAATAACCACTTCCTCCTGTGTGTATTACACAACCATTGCCTTA TGCTAAAGTTCCGTCACAGAATTTTCTGAAATGTAGTGTTACTAGAAATCCATAGTACAA GATGAATGATGATATGATCAGATGTTTCAAGCAATGGTTTGACATGTCTTATGAGC