Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0520100-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:25820744:25822805:-1 gene:Os05g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MPPN domain containing protein. (Os05t0520100-00)
Sequence	ATGGCCGCCTCCTCCTCGCGCTCCCCCGCCTCCACCTCGCGCCGCGGAGGCGGCGCGCGG CAGTCCCCGTTCTTCCGGGACCTCGCCTCCCCGATCCCGTCCCACCGCGCGGCCTCCCGC TTCGCCTCCTCGGCGGCGGGGCCCACCGCCGCCACGACGCCGCCGCCGCCGCCGCTCTTC ACCCTCGACGACCGCGCCGCCGCCGTGGACTTCTCCCCCGACGCCGCGGCCTCCGAACTC CTCCTCCCCGTCGCCTCCTCCCCCTCCCCGCGCTCCGCCGCGGCCGCCGCCAGCCGCTCC CCGTCATGGGACCGCTCCCGCGGCAGGGCCTCCGCCCCCGGATCCCCCATGGATGGGGTC GTGGAGCCGCCCCGGAAGGAGGTGCTTGCTTTGCCGCCTCCACCGAGCCCTGGTACCCCG GCGCCTCCGCCTCCGGCCGCCGAGGCACAGTCGCCTGTTACTCCGGCACCTGTGTCGACT GGTATGGAGCAGGAGATGAACGGAGGAGGGGAGGTAGATCGGGAGGAGTGGATCACTGTA TTCGGGTTCTCCCTTAAAGATACCAACCTTGTTATCCGGGAATTTGAGAAATGCGGAGTA ATTTTGCGGCATCACTCTGGTCCACGAGATGGTAATTGGATCCACATATTATATCTGCAC TCTTATGATGCTCGGAAAGCCCTTCAAAAGAATGGTGTCCAGCTAAGCAGTGGCGTCATT ATTGGGGTGAAGCCTATTGATCCAATGCATAGGCAGCAGCTCGATGAGAGGTTCGCTGGA AACAAACAAGGAGGCTTCATGGTTTCCTTGCCTCCAAAGTCTCTTGTTCTGAAGGGTACC GGTGCGTCGAATCAGTTGGGAGCCTTGCCACGCCCCTATGATCCTAAAGCTAACACAAAT GTTATCAGAGACGCTAACCGTCGTGCAACAGGTAGCGTTGCTGCACCAGCAAAATCTCTT GTAACGAATGTGATGGATTTGATATTTGGCATTTAA

Peptide Sequence

PEP ID	Os05t0520100-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:25820744:25822805:-1 gene:Os05g0520100 transcript:Os05t0520100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MPPN domain containing protein. (Os05t0520100-00)
Sequence	MAASSSRSPASTSRRGGGARQSPFFRDLASPIPSHRAASRFASSAAGPTAATTPPPPPLF TLDDRAAAVDFSPDAAASELLLPVASSPSPRSAAAAASRSPSWDRSRGRASAPGSPMDGV VEPPRKEVLALPPPPSPGTPAPPPPAAEAQSPVTPAPVSTGMEQEMNGGGEVDREEWITV FGFSLKDTNLVIREFEKCGVILRHHSGPRDGNWIHILYLHSYDARKALQKNGVQLSSGVI IGVKPIDPMHRQQLDERFAGNKQGGFMVSLPPKSLVLKGTGASNQLGALPRPYDPKANTN VIRDANRRATGSVAAPAKSLVTNVMDLIFGI

Transcript Sequence

Transcript ID	Os05t0520100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25820744:25822805:-1 gene:Os05g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MPPN domain containing protein. (Os05t0520100-00)
Sequence	ATGGCCGCCTCCTCCTCGCGCTCCCCCGCCTCCACCTCGCGCCGCGGAGGCGGCGCGCGG CAGTCCCCGTTCTTCCGGGACCTCGCCTCCCCGATCCCGTCCCACCGCGCGGCCTCCCGC TTCGCCTCCTCGGCGGCGGGGCCCACCGCCGCCACGACGCCGCCGCCGCCGCCGCTCTTC ACCCTCGACGACCGCGCCGCCGCCGTGGACTTCTCCCCCGACGCCGCGGCCTCCGAACTC CTCCTCCCCGTCGCCTCCTCCCCCTCCCCGCGCTCCGCCGCGGCCGCCGCCAGCCGCTCC CCGTCATGGGACCGCTCCCGCGGCAGGGCCTCCGCCCCCGGATCCCCCATGGATGGGGTC GTGGAGCCGCCCCGGAAGGAGGTGCTTGCTTTGCCGCCTCCACCGAGCCCTGGTACCCCG GCGCCTCCGCCTCCGGCCGCCGAGGCACAGTCGCCTGTTACTCCGGCACCTGTGTCGACT GGTATGGAGCAGGAGATGAACGGAGGAGGGGAGGTAGATCGGGAGGAGTGGATCACTGTA TTCGGGTTCTCCCTTAAAGATACCAACCTTGTTATCCGGGAATTTGAGAAATGCGGAGTA ATTTTGCGGCATCACTCTGGTCCACGAGATGGTAATTGGATCCACATATTATATCTGCAC TCTTATGATGCTCGGAAAGCCCTTCAAAAGAATGGTGTCCAGCTAAGCAGTGGCGTCATT ATTGGGGTGAAGCCTATTGATCCAATGCATAGGCAGCAGCTCGATGAGAGGTTCGCTGGA AACAAACAAGGAGGCTTCATGGTTTCCTTGCCTCCAAAGTCTCTTGTTCTGAAGGGTACC GGTGCGTCGAATCAGTTGGGAGCCTTGCCACGCCCCTATGATCCTAAAGCTAACACAAAT GTTATCAGAGACGCTAACCGTCGTGCAACAGGTAGCGTTGCTGCACCAGCAAAATCTCTT GTAACGAATGTGATGGATTTGATATTTGGCATTTAACCTGCCATTTTGAGGACCTATGAC CTCAACCTTTCCATGTTTCTTCTATGTTACTAGTCCTCTTGGAGGACGTGGTGGTGAGCA AGATGTCAGCGTGCCAAAGGTCCAGGAGCAAATTTGCCTAAGATTTAGAGAAATTGGAGA GGGAACTTATCTTTGGCGATGTAACCTTCATATTTTGCAACCTTTTCTTTTTTGGCTGCA CTTCTATATTATGATTCACTGAGAGCAGTTGTTGT