Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0519500-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:25788811:25793522:-1 gene:Os05g0519500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-120 description:Similar to Periodic tryptophan protein-associated region; WD40-like. (Os05t0519500-01);WD40/YVTN repeat-like domain containing protein. (Os05t0519500-02)
Sequence	ATGAACTACCGCTTCCACAACCTCCTGGGCGCGCCGTACCGCGGCGGCGACGCCGTCTTC GCCGGTGACTCCTCCGTCCTCCTCTCCGCCGTCGGCAACCGCGTCGCGTCCACCGACCTC TCCGCCTCCTCCTCCCTCACGCTCCCCTTCGAGTCCTCCTCCAACGTCACCCGCCTCGCC GTCTCCCCCTCGGGCGACTTCCTCCTCTCCGTCGACGACGCCGGCCGCGCGCTCTACGCC AACCTCGGCCGCCGCGCCGTCCTCCACCGGATCGCCTTCAAGTCCGCCCCCTCCGCCGTC CGCTTCAGCCCCGACGGCAACCTCATCGCCGTCGCCGTCGGTAAGCTCGTCCAGATCTGG CGCTCGCCCGCGTTCCGCAAGGAGTTCTTCCCTTTCCACCTGCTCCGCACCATCCCTGGC TTCGCCGCCGGTGTCACCGCCTTCGACTGGTCTCCCGACTCCTCGTTCCTCCTCGCCTCC TGCAAGGACCTCACCGCCCGCCTCTTGCCTGTCAAGAAAGGCCTTGGAGGCAAACCATTC CTCTTCGTTGGCCACCGCGCCGCCGTGGTTGGCGCCTTCTTCGCCACAGATAAGAAGACA GGGAGAGTCACTGGGGCTTACACAATTACCAAGGACGGAGCTATCTTTACATGGAATTTG GTGGAAGGAAGTGATGATTCGCCTCCACCTTCACCAGGGACGCCAGAGCAGGAGGCGGTA CAGGATGGTGAGGCTGAATTGGACGGTGACGAGCCCGAATTGGATGGCGGGAGCAGGAAA AGGAAGAGTTTCGGAGAATCGGAAGAACCAGACACTACCCCGCTGCATTTCACAAGGTGG GAGCTGCAGAAAAAGGACTTCTTCATGCAGTCACCGGCTAAGTTAACAGCCTGTGATTAC CATAGGGAGCTTGACATGGTGGTGGTTGGTTTCTCTAATGGTGTATTTGGGCTGTACCAG ATGCCAGACTTTGTGTGCCTCCACTTACTGTCAATATCAAGGGAGAAGATCACTACTGCT ATTTTCAACAGTTTGGGGAATTGGTTAGTTTTTGGATGTGCCAAACTTGGGCAATTACTG GTGTGGGAGTGGCGATCAGAGAGCTACATTTTGAAGCAGCAGGGGCACTACTTTGATGTG AACTGCATTGCATACTCACCAGACTCCCAATTACTGGCCACTGGAGCTGATGATAACAAA GTCAAGGTCTGGACAGTCTCCTCTGGGTTCTGTTTCATAACATTTTCGGAGCATACAAAC GCTGTTACTGCAGTTCATTTTATGGCCAATAATCATTCTCTTCTCAGTGCCTCCCTTGAT GGGACTATTCGAGCATGGGATCTGTTCCGCTATCGAAATTTCAAGACATTTACTACTGCA TTGCCCAGACAATTTGTTTCTTTAACGGCAGATCAGAGTGGAGAAGTAATATGTGCTGGA ACACTTGATTCATTTGAGATATTTGTTTGGTCAATGAAGACTGGTCGTTTGTTGGATATA CTCAGTGGTCACCAAGGACCAGTTCATGGCCTAATGTTTTCGCCAATCAATGCTATTTTG GCTTCATCATCATGGGACAAAACAGTTCGCCTTTGGGACGTATTTGAGAGCAAGGGTGCA GTGGAAACTTTTCAACATTCACATGATGTTCTTACTTTGGCTTATCGCCCTGATGGAAGA CAGATAGCATGCAGCACACTAGATGGCTTAATCCATTTCTGGGATCCATTTGACGGCCTG TTGATGTATACAATTGAAGGCCGCAGGGATATTGCCGGGGGTCGTCTCATGACTGACAGA AGATCTGCTGCTAATACAAGTATAGGAAAGTACTTCACAACGTTGTGCTATTCTGCTGAC GGGACTTATATTTTAGCTGGAGGAAACAGCAAATATATATGCATGTATGATGTTGGAGAA CAGGTGCTCTTGCGTAGATTCCAGATCACCCGCAATCTCTCGTTGGACGGAGTACTTGAT TTTCTGAACTCAAAGAAGATGACGGATGCTGGTGCACTAGATCTGATTGATGATGAGGAT AGTGATGTTGAGGAGGGGATCGATCAACAAACAAGAGGCAACTTGGGGCTTGGTTTGCCT GGTTCCATGGCAAATCGTGGAAGGCCCATAGCTCGGACAAAATGCGTGAAATTTGCTCCA ACAGGAAGATCTTTCGCTGCAGCAACCACTGATGGTGTTCTATTGTACTCTGTTGATGAT TCTTTTATTTTTGATCCAACAGATCTTGACATTGATGTTACCCCTGAGAAAGTGGAAGAA GCTCTTGAGGAAAACCAACAGCAAAGAGCCCTTCTACTCAGCCTCCGGTTAAATGAAGAC TCCTTGATCAAGAAGTGCATTTTTTCAGTGGATCCATCCAATGTACGAGCAATTTGTTCA TCAACACCCTTGAAGTATCTTCAGAGATTAATCGAAGCATTTTCTGACCTTTTGGAAAGT TGTCCCCATCTTGAATTTATTCTCCTCTGGTCTCAGGAGCTATGCAAGATTCACGGAAAC TATATTCAACAAAACTCCAGAGCCTTGCTTCCTGCTCTGAAGTCGTTTCAGAAGTCTATA ACAAGAATTCATCAGGATTTGGCCGACACTTGTTCTTCTAATGAGTACATGTTGAAGTAT CTGTGCTCTTCTGGGACGAGGAATTAG

Peptide Sequence

PEP ID	Os05t0519500-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:25788811:25793522:-1 gene:Os05g0519500 transcript:Os05t0519500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-120 description:Similar to Periodic tryptophan protein-associated region; WD40-like. (Os05t0519500-01);WD40/YVTN repeat-like domain containing protein. (Os05t0519500-02)
Sequence	MNYRFHNLLGAPYRGGDAVFAGDSSVLLSAVGNRVASTDLSASSSLTLPFESSSNVTRLA VSPSGDFLLSVDDAGRALYANLGRRAVLHRIAFKSAPSAVRFSPDGNLIAVAVGKLVQIW RSPAFRKEFFPFHLLRTIPGFAAGVTAFDWSPDSSFLLASCKDLTARLLPVKKGLGGKPF LFVGHRAAVVGAFFATDKKTGRVTGAYTITKDGAIFTWNLVEGSDDSPPPSPGTPEQEAV QDGEAELDGDEPELDGGSRKRKSFGESEEPDTTPLHFTRWELQKKDFFMQSPAKLTACDY HRELDMVVVGFSNGVFGLYQMPDFVCLHLLSISREKITTAIFNSLGNWLVFGCAKLGQLL VWEWRSESYILKQQGHYFDVNCIAYSPDSQLLATGADDNKVKVWTVSSGFCFITFSEHTN AVTAVHFMANNHSLLSASLDGTIRAWDLFRYRNFKTFTTALPRQFVSLTADQSGEVICAG TLDSFEIFVWSMKTGRLLDILSGHQGPVHGLMFSPINAILASSSWDKTVRLWDVFESKGA VETFQHSHDVLTLAYRPDGRQIACSTLDGLIHFWDPFDGLLMYTIEGRRDIAGGRLMTDR RSAANTSIGKYFTTLCYSADGTYILAGGNSKYICMYDVGEQVLLRRFQITRNLSLDGVLD FLNSKKMTDAGALDLIDDEDSDVEEGIDQQTRGNLGLGLPGSMANRGRPIARTKCVKFAP TGRSFAAATTDGVLLYSVDDSFIFDPTDLDIDVTPEKVEEALEENQQQRALLLSLRLNED SLIKKCIFSVDPSNVRAICSSTPLKYLQRLIEAFSDLLESCPHLEFILLWSQELCKIHGN YIQQNSRALLPALKSFQKSITRIHQDLADTCSSNEYMLKYLCSSGTRN

Transcript Sequence

Transcript ID	Os05t0519500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25788811:25793522:-1 gene:Os05g0519500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-120 description:Similar to Periodic tryptophan protein-associated region; WD40-like. (Os05t0519500-01);WD40/YVTN repeat-like domain containing protein. (Os05t0519500-02)
Sequence	ATGAACTACCGCTTCCACAACCTCCTGGGCGCGCCGTACCGCGGCGGCGACGCCGTCTTC GCCGGTGACTCCTCCGTCCTCCTCTCCGCCGTCGGCAACCGCGTCGCGTCCACCGACCTC TCCGCCTCCTCCTCCCTCACGCTCCCCTTCGAGTCCTCCTCCAACGTCACCCGCCTCGCC GTCTCCCCCTCGGGCGACTTCCTCCTCTCCGTCGACGACGCCGGCCGCGCGCTCTACGCC AACCTCGGCCGCCGCGCCGTCCTCCACCGGATCGCCTTCAAGTCCGCCCCCTCCGCCGTC CGCTTCAGCCCCGACGGCAACCTCATCGCCGTCGCCGTCGGTAAGCTCGTCCAGATCTGG CGCTCGCCCGCGTTCCGCAAGGAGTTCTTCCCTTTCCACCTGCTCCGCACCATCCCTGGC TTCGCCGCCGGTGTCACCGCCTTCGACTGGTCTCCCGACTCCTCGTTCCTCCTCGCCTCC TGCAAGGACCTCACCGCCCGCCTCTTGCCTGTCAAGAAAGGCCTTGGAGGCAAACCATTC CTCTTCGTTGGCCACCGCGCCGCCGTGGTTGGCGCCTTCTTCGCCACAGATAAGAAGACA GGGAGAGTCACTGGGGCTTACACAATTACCAAGGACGGAGCTATCTTTACATGGAATTTG GTGGAAGGAAGTGATGATTCGCCTCCACCTTCACCAGGGACGCCAGAGCAGGAGGCGGTA CAGGATGGTGAGGCTGAATTGGACGGTGACGAGCCCGAATTGGATGGCGGGAGCAGGAAA AGGAAGAGTTTCGGAGAATCGGAAGAACCAGACACTACCCCGCTGCATTTCACAAGGTGG GAGCTGCAGAAAAAGGACTTCTTCATGCAGTCACCGGCTAAGTTAACAGCCTGTGATTAC CATAGGGAGCTTGACATGGTGGTGGTTGGTTTCTCTAATGGTGTATTTGGGCTGTACCAG ATGCCAGACTTTGTGTGCCTCCACTTACTGTCAATATCAAGGGAGAAGATCACTACTGCT ATTTTCAACAGTTTGGGGAATTGGTTAGTTTTTGGATGTGCCAAACTTGGGCAATTACTG GTGTGGGAGTGGCGATCAGAGAGCTACATTTTGAAGCAGCAGGGGCACTACTTTGATGTG AACTGCATTGCATACTCACCAGACTCCCAATTACTGGCCACTGGAGCTGATGATAACAAA GTCAAGGTCTGGACAGTCTCCTCTGGGTTCTGTTTCATAACATTTTCGGAGCATACAAAC GCTGTTACTGCAGTTCATTTTATGGCCAATAATCATTCTCTTCTCAGTGCCTCCCTTGAT GGGACTATTCGAGCATGGGATCTGTTCCGCTATCGAAATTTCAAGACATTTACTACTGCA TTGCCCAGACAATTTGTTTCTTTAACGGCAGATCAGAGTGGAGAAGTAATATGTGCTGGA ACACTTGATTCATTTGAGATATTTGTTTGGTCAATGAAGACTGGTCGTTTGTTGGATATA CTCAGTGGTCACCAAGGACCAGTTCATGGCCTAATGTTTTCGCCAATCAATGCTATTTTG GCTTCATCATCATGGGACAAAACAGTTCGCCTTTGGGACGTATTTGAGAGCAAGGGTGCA GTGGAAACTTTTCAACATTCACATGATGTTCTTACTTTGGCTTATCGCCCTGATGGAAGA CAGATAGCATGCAGCACACTAGATGGCTTAATCCATTTCTGGGATCCATTTGACGGCCTG TTGATGTATACAATTGAAGGCCGCAGGGATATTGCCGGGGGTCGTCTCATGACTGACAGA AGATCTGCTGCTAATACAAGTATAGGAAAGTACTTCACAACGTTGTGCTATTCTGCTGAC GGGACTTATATTTTAGCTGGAGGAAACAGCAAATATATATGCATGTATGATGTTGGAGAA CAGGTGCTCTTGCGTAGATTCCAGATCACCCGCAATCTCTCGTTGGACGGAGTACTTGAT TTTCTGAACTCAAAGAAGATGACGGATGCTGGTGCACTAGATCTGATTGATGATGAGGAT AGTGATGTTGAGGAGGGGATCGATCAACAAACAAGAGGCAACTTGGGGCTTGGTTTGCCT GGTTCCATGGCAAATCGTGGAAGGCCCATAGCTCGGACAAAATGCGTGAAATTTGCTCCA ACAGGAAGATCTTTCGCTGCAGCAACCACTGATGGTGTTCTATTGTACTCTGTTGATGAT TCTTTTATTTTTGATCCAACAGATCTTGACATTGATGTTACCCCTGAGAAAGTGGAAGAA GCTCTTGAGGAAAACCAACAGCAAAGAGCCCTTCTACTCAGCCTCCGGTTAAATGAAGAC TCCTTGATCAAGAAGTGCATTTTTTCAGTGGATCCATCCAATGTACGAGCAATTTGTTCA TCAACACCCTTGAAGTATCTTCAGAGATTAATCGAAGCATTTTCTGACCTTTTGGAAAGT TGTCCCCATCTTGAATTTATTCTCCTCTGGTCTCAGGAGCTATGCAAGATTCACGGAAAC TATATTCAACAAAACTCCAGAGCCTTGCTTCCTGCTCTGAAGTCGTTTCAGAAGTCTATA ACAAGAATTCATCAGGATTTGGCCGACACTTGTTCTTCTAATGAGTACATGTTGAAGTAT CTGTGCTCTTCTGGGACGAGGAATTAGGTTATGGTTGAGAAATGCTGACAATTCAATACT ATTGCAGGAAAGTGTTAACTGAGCAGCAGCACATCATCAGGCACCAGCTGAGTACTGGCC ATCTGTACTGGACGCGATTCTCCGCGCTGCAGTCCTCGCCACAACTCGTCGGCCGAAGAG CGAGTCGACCTGAGGCTTCGTCAGGCAGTGTGTTGCTTTTTTTGCCCAAAAGATGGACCC TCTCGTCGACCATGAAAATTTTCCTTGTTGCCTGGTGTACTTTTCCTTGTTGGATCTTGG ATGATGTGTGTACACACCTTACTGAAATTTTGTCACCCAGTTTTGTTGAAACGATCCAGA AAGAATATATCATGCATCACAAGTATGGAGTACTTGTGGGTTTCCT