Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0519200-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:25771992:25775926:1 gene:Os05g0519200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os05t0519200-01);Serine/threonine protein kinase domain containing protein. (Os05t0519200-02);Similar to protein kinase. (Os05t0519200-03)
Sequence	ATGGATGATGATGACTACTCCTGGGTGCGGCGCACCAAGTTCTCGCACTCCATTGTTAAA TCCAACTCTGGCAGGGAGCAGTTTGGTGCATTCCTTGATCCGTTTGACAGTTCCACTGCA TGGAGGCAGAAAGGATTCAGTGGAGAGCTCATGATTCATGGACATAATTTACAGCCGAGG GCAAAAGGAGCAGTCTCAAAGTCACCTAGGCCTTCAATCCCGTTGGCGAAATCACCAGTT TCACAGGCAGAGCGGAAGCTGAAAGCTAAGTTTTCAGATGGTGAATTGAAACAACGGGGG AAAATTAGTGATGGCTCGTTGCGAGAAGCATCGAAAGAGAAGGATCGCAAGGTTGGGCAT AAAGGAGAAGGCCTTAGCCTGGATATTTCTTGTCCAATTCTGGATCGGACAGTTCAGGAT GACAGTTCAGACACGCTTGACTTCTCTTTCCACTCAGAAGAGCAAAGTTTAAGGTTGCTG AGAGTATGCTCGAGTCCAGCTCCTTTCTATTCGAAGGATACAACTACGTTTGGTGATTCC AAAATACATAGTACGTCTGTTAAGATTGTTGGAGAGGGATCGAAGCCGAGGAGGAGAGCG AAATCCCCAATGCCGACCCGTGTCATCTCTGAAGTTTTTAAGGAGGCCAAAGCTGCCACT AAGAGGTTCTCTAGCCCACAGCGGCAAAGGAAATCTAGTTCTCCACATTCACCACGTTCA CCCGATGATAGTCCCCGGTTTGGCTTTCCTTCAATGAGAACACCGGGTAACTTGAAAGCT AGGAGGGCCTCGTCCTGGCCAAGGAACTATGACAATGGAGTGGCCAAGGCTGTTGCATTG GATATACTTGAGAGATGGACAATTGACCGCTCACAGTTACTCATTGGTCAAAGATTTGCA TCAGGGGCATATAGTCGTTTGTTCCATGGAATTTACAAGGAGCAGCCAGTTGCTGTCAAA TTTATCAGGCAGCCTGATGAAGAAGAAGATGCAGAATTGGCTGCTAAACTTGAGAAGCAA TTCACTGCTGAAGTAACCATTCTGGCTCGGCTCCATCATCGCAATGTCATTAAGCTGATT GGGGCATGTAATGCTCCACCGGTCTTTTGTGTCATCACTGAGTTCCTGTGCGGGGGGTCT TTGAGAGCTTTTTTGCGCAAGCTCCAGCGCCAAAAGCTTCCTTTGGAGAAGATCATTTGC ATTGCTTTGGATATTGCACATGGTTTGGAGTACATTCACTCGCAAAGAGTAATCCATCGT GATGTGAAACCTGAGAACATCTTGTTTGATGGAGAATGTTGTGCAAAGGTTGTTGATTTT GGAGTGGCTTGTGAAGAAGTATACTGCAACTCATTGGAAGATGACCCAGGTACTTACAGA TGGATGGCACCAGAGATGTATAAGCGCAAACCATATGGTCGGAAGGTTGACGTCTACAGT TTTGGCCTCGTATTGTGGGAATTGTTTAGTGGCTCGATCCCTTATGAAGAGATGACTCCA TTGCAGGCAGCTTTTGCAGTTGTTAATAAGAACTTAAGACCAGTTGTTCCTTCAAGCTGT CCGGCGCAACTTCGACTTTTGATCGAGCAATGTTGGTCTTGTCAACCAGAGAAGAGACCT GAGTTTTCCCAAGTAGTTCAGATCCTCAAAAATCTCAAGGAGGCCCTGGATAGAGATGGA ACGCTTGACAAGATCCCAAGCACCAACTGCCAGGAACCTCCTGATCAGAACAAGAAGAGA CTGTCCAATTGGATCCAAAGACTCTCGTACAGTCAGGCCGATTTCTCCGGACCTCCACCG CCAAAGTTATTGTAA

Peptide Sequence

PEP ID	Os05t0519200-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:25771992:25775926:1 gene:Os05g0519200 transcript:Os05t0519200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os05t0519200-01);Serine/threonine protein kinase domain containing protein. (Os05t0519200-02);Similar to protein kinase. (Os05t0519200-03)
Sequence	MDDDDYSWVRRTKFSHSIVKSNSGREQFGAFLDPFDSSTAWRQKGFSGELMIHGHNLQPR AKGAVSKSPRPSIPLAKSPVSQAERKLKAKFSDGELKQRGKISDGSLREASKEKDRKVGH KGEGLSLDISCPILDRTVQDDSSDTLDFSFHSEEQSLRLLRVCSSPAPFYSKDTTTFGDS KIHSTSVKIVGEGSKPRRRAKSPMPTRVISEVFKEAKAATKRFSSPQRQRKSSSPHSPRS PDDSPRFGFPSMRTPGNLKARRASSWPRNYDNGVAKAVALDILERWTIDRSQLLIGQRFA SGAYSRLFHGIYKEQPVAVKFIRQPDEEEDAELAAKLEKQFTAEVTILARLHHRNVIKLI GACNAPPVFCVITEFLCGGSLRAFLRKLQRQKLPLEKIICIALDIAHGLEYIHSQRVIHR DVKPENILFDGECCAKVVDFGVACEEVYCNSLEDDPGTYRWMAPEMYKRKPYGRKVDVYS FGLVLWELFSGSIPYEEMTPLQAAFAVVNKNLRPVVPSSCPAQLRLLIEQCWSCQPEKRP EFSQVVQILKNLKEALDRDGTLDKIPSTNCQEPPDQNKKRLSNWIQRLSYSQADFSGPPP PKLL

Transcript Sequence

Transcript ID	Os05t0519200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25771992:25775926:1 gene:Os05g0519200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to protein kinase. (Os05t0519200-01);Serine/threonine protein kinase domain containing protein. (Os05t0519200-02);Similar to protein kinase. (Os05t0519200-03)
Sequence	GAGTGAGAGAGCTCGCGCGCGCGCGCGTGCGTTCGCCTACTACATTCTTTCCCCTCCAAC CTTTTCGAGGAGGAGGAGGAGGCGGTGGCGATTGATGGAATCTGATCGAATGCCGCTTCA GGCTGGGTCAATCGAGCTGGCTGCAACGATCGGAGGTTTCCTATCCCCTCGTGAAGGTGT CAAATCAGTATCCTTGTGCCGGATGGTTTGGGGATAATTTTCGTAGTGAGTTCATAATAG CGTCTCATTTGGGATTCCTCTGGTTGATTCAGTTCCCTTTGCAAGTTTGCGGGTTTGTTC ACGGATTTGGTTGGCTTGAGATCGATCTTCATTCATTGGGAGATGGATGATGATGACTAC TCCTGGGTGCGGCGCACCAAGTTCTCGCACTCCATTGTTAAATCCAACTCTGGCAGGGAG CAGTTTGGTGCATTCCTTGATCCGTTTGACAGTTCCACTGCATGGAGGCAGAAAGGATTC AGTGGAGAGCTCATGATTCATGGACATAATTTACAGCCGAGGGCAAAAGGAGCAGTCTCA AAGTCACCTAGGCCTTCAATCCCGTTGGCGAAATCACCAGTTTCACAGGCAGAGCGGAAG CTGAAAGCTAAGTTTTCAGATGGTGAATTGAAACAACGGGGGAAAATTAGTGATGGCTCG TTGCGAGAAGCATCGAAAGAGAAGGATCGCAAGGTTGGGCATAAAGGAGAAGGCCTTAGC CTGGATATTTCTTGTCCAATTCTGGATCGGACAGTTCAGGATGACAGTTCAGACACGCTT GACTTCTCTTTCCACTCAGAAGAGCAAAGTTTAAGGTTGCTGAGAGTATGCTCGAGTCCA GCTCCTTTCTATTCGAAGGATACAACTACGTTTGGTGATTCCAAAATACATAGTACGTCT GTTAAGATTGTTGGAGAGGGATCGAAGCCGAGGAGGAGAGCGAAATCCCCAATGCCGACC CGTGTCATCTCTGAAGTTTTTAAGGAGGCCAAAGCTGCCACTAAGAGGTTCTCTAGCCCA CAGCGGCAAAGGAAATCTAGTTCTCCACATTCACCACGTTCACCCGATGATAGTCCCCGG TTTGGCTTTCCTTCAATGAGAACACCGGGTAACTTGAAAGCTAGGAGGGCCTCGTCCTGG CCAAGGAACTATGACAATGGAGTGGCCAAGGCTGTTGCATTGGATATACTTGAGAGATGG ACAATTGACCGCTCACAGTTACTCATTGGTCAAAGATTTGCATCAGGGGCATATAGTCGT TTGTTCCATGGAATTTACAAGGAGCAGCCAGTTGCTGTCAAATTTATCAGGCAGCCTGAT GAAGAAGAAGATGCAGAATTGGCTGCTAAACTTGAGAAGCAATTCACTGCTGAAGTAACC ATTCTGGCTCGGCTCCATCATCGCAATGTCATTAAGCTGATTGGGGCATGTAATGCTCCA CCGGTCTTTTGTGTCATCACTGAGTTCCTGTGCGGGGGGTCTTTGAGAGCTTTTTTGCGC AAGCTCCAGCGCCAAAAGCTTCCTTTGGAGAAGATCATTTGCATTGCTTTGGATATTGCA CATGGTTTGGAGTACATTCACTCGCAAAGAGTAATCCATCGTGATGTGAAACCTGAGAAC ATCTTGTTTGATGGAGAATGTTGTGCAAAGGTTGTTGATTTTGGAGTGGCTTGTGAAGAA GTATACTGCAACTCATTGGAAGATGACCCAGGTACTTACAGATGGATGGCACCAGAGATG TATAAGCGCAAACCATATGGTCGGAAGGTTGACGTCTACAGTTTTGGCCTCGTATTGTGG GAATTGTTTAGTGGCTCGATCCCTTATGAAGAGATGACTCCATTGCAGGCAGCTTTTGCA GTTGTTAATAAGAACTTAAGACCAGTTGTTCCTTCAAGCTGTCCGGCGCAACTTCGACTT TTGATCGAGCAATGTTGGTCTTGTCAACCAGAGAAGAGACCTGAGTTTTCCCAAGTAGTT CAGATCCTCAAAAATCTCAAGGAGGCCCTGGATAGAGATGGAACGCTTGACAAGATCCCA AGCACCAACTGCCAGGAACCTCCTGATCAGAACAAGAAGAGACTGTCCAATTGGATCCAA AGACTCTCGTACAGTCAGGCCGATTTCTCCGGACCTCCACCGCCAAAGTTATTGTAATTA TATGCATTCCTCTCTTCCATAAATATCGTAGCATCTGCTAGATGTCTCTGTAAATCATAA GGTTCTTCTTGGTGTATAAACTCCGCACATTTTTTTAGTGGACAGTTCATTCTTGTTTGG CTTAGTAATTTTGCCTGCAACCAACCAATGGAGTCTTAGTTCCCGGCGGGTGGGGA