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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0518000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:25667364:25669371:-1 gene:Os05g0518000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOWERING TIME LIKE GENE 10 description:Similar to ZCN12 protein. (Os05t0518000-00)
Sequence

ATGGATCCTTTGTACCTATCTCAGATCATACCGGATGTGTTGGATCCATTTATTTCAACC
ATTTCACTCAGAGTAACCTACAACAGCAGGCTACTTCTGGCAGGAGCAGCGCTTAAACCA
TCTGCAGTTGTAAGCAAGCCACAGGTTGATGTTGGTGGCAATGACATGAGGGTTTCCTAC
ACACTGGTATTGGTGGATCCAGATGCCCCAAGCCCAAGTGACCCATCGCTGAGGGAGTAC
TTGCACTGGATGGTAACAGATATCCCTGAAACAACTTCCATCAGCTTTGGCGAAGAGTTA
ATATTATATGAGAAGCCAGAGCCAAGATCAGGCATCCATCGGATGGTATTTGTGCTGTTC
CGCCAACTTGGCAGGCGGACAGTCTTTGCACCGGAAAAACGACATAACTTCAACTGCAGA
ATTTTTGCACGCCAACACCACCTCAACATCGTGGCTGCCACATACTTCAACTGTCAAAGG
GAGGCAGGATGGGGTGGAAGAAAGTTTGCGCCTGAAGGCCCTTAA

Peptide Sequence

PEP ID

Os05t0518000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:25667364:25669371:-1 gene:Os05g0518000 transcript:Os05t0518000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOWERING TIME LIKE GENE 10 description:Similar to ZCN12 protein. (Os05t0518000-00)
Sequence

MDPLYLSQIIPDVLDPFISTISLRVTYNSRLLLAGAALKPSAVVSKPQVDVGGNDMRVSY
TLVLVDPDAPSPSDPSLREYLHWMVTDIPETTSISFGEELILYEKPEPRSGIHRMVFVLF
RQLGRRTVFAPEKRHNFNCRIFARQHHLNIVAATYFNCQREAGWGGRKFAPEGP

Transcript Sequence

Transcript ID

Os05t0518000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:25667364:25669371:-1 gene:Os05g0518000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLOWERING TIME LIKE GENE 10 description:Similar to ZCN12 protein. (Os05t0518000-00)
Sequence

CAATGGATCCTTTGTACCTATCTCAGATCATACCGGATGTGTTGGATCCATTTATTTCAA
CCATTTCACTCAGAGTAACCTACAACAGCAGGCTACTTCTGGCAGGAGCAGCGCTTAAAC
CATCTGCAGTTGTAAGCAAGCCACAGGTTGATGTTGGTGGCAATGACATGAGGGTTTCCT
ACACACTGGTATTGGTGGATCCAGATGCCCCAAGCCCAAGTGACCCATCGCTGAGGGAGT
ACTTGCACTGGATGGTAACAGATATCCCTGAAACAACTTCCATCAGCTTTGGCGAAGAGT
TAATATTATATGAGAAGCCAGAGCCAAGATCAGGCATCCATCGGATGGTATTTGTGCTGT
TCCGCCAACTTGGCAGGCGGACAGTCTTTGCACCGGAAAAACGACATAACTTCAACTGCA
GAATTTTTGCACGCCAACACCACCTCAACATCGTGGCTGCCACATACTTCAACTGTCAAA
GGGAGGCAGGATGGGGTGGAAGAAAGTTTGCGCCTGAAGGCCCTTAAGAGAAGTACTAGC
AAATATAGCCATCACAAATTATGTGCTTATATATACAGAACGCACTGTACTATCTCTATA
TGCAGCACTATATATTTA