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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0517500-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:25653371:25655907:-1 gene:Os05g0517500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). (Os05t0517500-01);Similar to Gamma-glutamyl hydrolase. (Os05t0517500-02)
Sequence

GACAATAATATCTTGGAGTCATTCAGTGCCACAAATCAAGCATCTACTCTTCAATTTCCC
AATTACTCTTCACTTGAGGGATCAGTATTTGAAAGATTTGATCCTGATCTCATCAAGAAA
CTAAGCACCAGTTGTCTTGTGATGCAAAACCACAAATATGGTATATCACCCAAGACATTG
CGAGAGAATGTTGCCTTATCAAGTTTCTTCAAGATTCTGACAACCTCACCTGATGAAAAT
GGCGAGGTCTATGTCTCAACCGTGCAAGCAAACAAATATCCTATCACATGCACTCAGTGG
CATCCTGAGAAAGCTATTTTTGAGTTTGGTAAACAAATGATTCCACACAGCGAGGAGGCA
GTACAAGTGACACAAAATTTTGCCAACTATTTTATCAGCCAAGCCCGCAAGTCCCAGAAC
AGACCTCCCGCAGACAAGGTGTTGGACAACCTGATTTACAACTACAGCCCTACGTTTATT
GGGAAAAAATCGAAATCGTTCGACGTGGTCTACATCTTCTCCTAA

Peptide Sequence

PEP ID

Os05t0517500-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:25653371:25655907:-1 gene:Os05g0517500 transcript:Os05t0517500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). (Os05t0517500-01);Similar to Gamma-glutamyl hydrolase. (Os05t0517500-02)
Sequence

DNNILESFSATNQASTLQFPNYSSLEGSVFERFDPDLIKKLSTSCLVMQNHKYGISPKTL
RENVALSSFFKILTTSPDENGEVYVSTVQANKYPITCTQWHPEKAIFEFGKQMIPHSEEA
VQVTQNFANYFISQARKSQNRPPADKVLDNLIYNYSPTFIGKKSKSFDVVYIFS

Transcript Sequence

Transcript ID

Os05t0517500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:25653371:25655907:-1 gene:Os05g0517500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). (Os05t0517500-01);Similar to Gamma-glutamyl hydrolase. (Os05t0517500-02)
Sequence

AGGACAATAATATCTTGGAGTCATTCAGTGCCACAAATCAAGCATCTACTCTTCAATTTC
CCAATTACTCTTCACTTGAGGGATCAGTATTTGAAAGATTTGATCCTGATCTCATCAAGA
AACTAAGCACCAGTTGTCTTGTGATGCAAAACCACAAATATGGTATATCACCCAAGACAT
TGCGAGAGAATGTTGCCTTATCAAGTTTCTTCAAGATTCTGACAACCTCACCTGATGAAA
ATGGCGAGGTCTATGTCTCAACCGTGCAAGCAAACAAATATCCTATCACATGCACTCAGT
GGCATCCTGAGAAAGCTATTTTTGAGTTTGGTAAACAAATGATTCCACACAGCGAGGAGG
CAGTACAAGTGACACAAAATTTTGCCAACTATTTTATCAGCCAAGCCCGCAAGTCCCAGA
ACAGACCTCCCGCAGACAAGGTGTTGGACAACCTGATTTACAACTACAGCCCTACGTTTA
TTGGGAAAAAATCGAAATCGTTCGACGTGGTCTACATCTTCTCCTAATGGCCAACCTGAT
CATTGAAAGTCTTCGCTATTGTATTCTACATGGAGTGCTTCACTGTGTATGAGTATATAT
GTGTCCATTGTCTACCATTGTGCTGCATTGCCGTTGCCGCTGTAATTTATCAGACGAATC
AAGAGCGGATTTCGCTCCCTGCTTTGGAAGGAGGTCCCAGCTGTTTGATCCGCGGTC