Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0516900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25629221:25635032:1 gene:Os05g0516900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF300 family protein. (Os05t0516900-01)
Sequence	ATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTG GGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGC TGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTA ATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTC ATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTT GCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCGCCATGTATTGCTTTGAG AGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCAGATTCATGGAGGGTCGA TTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATGATTATGGTATTGTGAAG CATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTGGTCCTGATTTTTACCAT GCTGTGAAGGTTGGGATTGTGCAATATATGATACTGAAGCCTATTTGTGCCATCTTGGCA ATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTGCATGGAGATACGGGTAC CCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCATTATACTGTCTAATACAA TTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCCTGTCTAAGTTTCTAACC TTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTGTTGCATTTCTTTTTTCA ACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACACGTATCCAGGATTACATC ATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAGTATTTCCAGCTAAACCT TACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGTCTGATTATGCATCTCTG GGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAGCAATCATGCAAGCTGCT CGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTGTTCGCGATGTCGTTTTA GGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTTCCCACGTCGTGGAGCCT GTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAATCTCCGAAAACGTCAAG CAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATGTTCCCCTTGAACCATTT TCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTAGTGTTAGCGACAGTGGA TTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGTCTCTGAAACCGTTCGAG TTCAGATTAGGTAGATGGTTCCAGTAG

Peptide Sequence

PEP ID	Os05t0516900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25629221:25635032:1 gene:Os05g0516900 transcript:Os05t0516900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF300 family protein. (Os05t0516900-01)
Sequence	MAMKNVVRFFFVLIHVSSCLGRSGKMFSPGFVSLSESLPSWPIVSAGISVTASLVLSLFL IFEHLCAYHQPEEQKFLIGLILMVPVYAVQSFFSLLNSNVAFICELMRDCYEAFAMYCFE RYLIACLGGEESTIRFMEGRFQFSESSPLLDVDYDYGIVKHPFPLNWFMRNWYLGPDFYH AVKVGIVQYMILKPICAILAIFMQLIGIYGEGKFAWRYGYPYLAIVLNFSQTWALYCLIQ FYTATKEKLEPIKPLSKFLTFKSIVFLTWWQGIAVAFLFSTGLFKGHLAQRFQTRIQDYI ICLEMGVAAVVHLKVFPAKPYRRGERSVSNVAVMSDYASLGASDPEEEREIDNVAIMQAA RPDSRDRRLSFPQSVRDVVLGSGEIMVDDVKYTVSHVVEPVERSFSKINRTLHQISENVK QLEKQKRKAKDDSDVPLEPFSEEFAEAHDNVFGGSVSDSGLARKKYKNTKRAPSSLKPFE FRLGRWFQ

Transcript Sequence

Transcript ID	Os05t0516900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25629221:25635032:1 gene:Os05g0516900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF300 family protein. (Os05t0516900-01)
Sequence	AAGCGCCAGACAAATTCGTCTCCCTCGTTGGAAGTGGAGGCGCGGAGGCGGAAGCTTTTC CTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCA CAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTC ATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAG CCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCA CGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATAC ATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGT CAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTG TTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAA AGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCAT TACTGAACTCAAATGTTGCATTTATATGTGAACTGATGCGGGACTGTTATGAGGCATTCG CCATGTATTGCTTTGAGAGATATCTCATAGCATGTTTAGGTGGGGAGGAAAGTACAATCA GATTCATGGAGGGTCGATTTCAATTCAGTGAGAGTTCTCCTCTGCTAGATGTTGATTATG ATTATGGTATTGTGAAGCATCCTTTCCCATTAAACTGGTTTATGAGAAATTGGTACCTTG GTCCTGATTTTTACCATGCTGTGAAGGTTGGGATTGTGCAATATATGATACTGAAGCCTA TTTGTGCCATCTTGGCAATTTTTATGCAACTTATTGGGATCTATGGGGAAGGAAAATTTG CATGGAGATACGGGTACCCATATTTGGCCATTGTCCTAAATTTCAGCCAGACATGGGCAT TATACTGTCTAATACAATTTTATACTGCTACCAAGGAGAAGTTGGAACCTATTAAGCCCC TGTCTAAGTTTCTAACCTTCAAATCCATTGTATTTTTGACATGGTGGCAAGGTATTGCTG TTGCATTTCTTTTTTCAACTGGGCTTTTTAAAGGACATTTGGCGCAAAGATTTCAAACAC GTATCCAGGATTACATCATATGCCTTGAGATGGGGGTGGCTGCAGTGGTTCATTTGAAAG TATTTCCAGCTAAACCTTACAGACGTGGGGAGAGAAGTGTTAGCAATGTTGCTGTGATGT CTGATTATGCATCTCTGGGAGCTTCAGATCCTGAAGAAGAACGAGAGATTGACAATGTAG CAATCATGCAAGCTGCTCGTCCTGATTCCAGGGACCGGCGATTGAGTTTCCCTCAGAGTG TTCGCGATGTCGTTTTAGGAAGTGGTGAAATTATGGTTGATGATGTCAAATATACAGTTT CCCACGTCGTGGAGCCTGTGGAGCGGAGTTTTTCCAAGATAAACCGGACACTTCATCAAA TCTCCGAAAACGTCAAGCAGCTTGAGAAGCAAAAGAGAAAGGCTAAGGATGATAGTGATG TTCCCCTTGAACCATTTTCAGAGGAATTCGCAGAAGCTCATGACAATGTTTTCGGAGGTA GTGTTAGCGACAGTGGATTAGCTAGGAAAAAGTACAAGAACACCAAAAGGGCACCGTCGT CTCTGAAACCGTTCGAGTTCAGATTAGGTAGATGGTTCCAGTAGTCAGCCAGTTGTGGTT TATTGGGTTTTGTTTCTGACCAACAGGGAGCTAACCTCAAATCCAGCAGTTTATACAACA TAGGACATACTGGGGGCAAAGCGATGACATTTCCGAAAACTAACAGTTCACAGGAGGATG ATGTGCACTGGAGCTTCAGTTTCCTTCATTAACTTTCCTCTTGTGTTTATACAGCTCGTC CTGGCCCTTGTCAATTTCAGGAGGCAGTTACTAGAATTTTTTTTGTCATGAGAGCAGCCT TGTTTAGTCTAGTTAACTACACTTACTACAGGCAAAGAAATATTAAGCCGCGGCAAAGCA ACTACTACTGAATACTGATGTAACCCTCCTTAAGTTTCTTTGAATTAACATGCATAGAAG GGATACATTTGTAAACTGATGAACAACATGTTTCAAATCGGTAAAGTGATAATAGCACCA ATGTGAAGTTCTGTTGTT