Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0516800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25625109:25627147:-1 gene:Os05g0516800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab11D3 description:Similar to Ras-related protein RIC2. (Os05t0516800-01)
Sequence	ATGTCGGCCGCGGCGGGCGGGTACAGGGCGGAGGACGACTACGACTACCTGTTCAAGGTG GTGCTCATCGGCGACTCCGGCGTCGGCAAGTCCAACCTCCTCTCCCGCTTCACCAAGAAC GAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCCTCCAG GTCGACGGCAAGGTCATCAAGGCCCAGATTTGGGACACCGCCGGCCAGGAGAGGTATCGT GCTATCACTAGTGCCTATTACCGGGGAGCTGTGGGAGCATTGCTCGTCTACGATGTCACC CGTCGTGCTACATTCGACAACGTGGGACGCTGGCTAAGGGAGCTTAGAGACCACACTGAT CCTAGCATTGTCTGCATGCTGATTGGCAACAAATCCGATCTCCGCCACTTGGTGGCTGTC TCAACCGAGGACGGCAAAGAGTTTGCTGAAGCCGAATCAATGTACTTCATGGAAACTTCT GCGCTCGACGCTACCAACGTCGACAATGCGTTCGCGGAGGTCCTGACTCAGATATACCAG ATTGTGAACAAGAAGCCGGTGGAGGCACCTGAGGATGGGTCGGCTGGCCCAGGAAAAGGA GAGAAGATAAACGTGAAAGATGATGTCTCGGCGATGAAGAGAGTTGGATGTTGCTCAAAC TAA

Peptide Sequence

PEP ID	Os05t0516800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25625109:25627147:-1 gene:Os05g0516800 transcript:Os05t0516800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab11D3 description:Similar to Ras-related protein RIC2. (Os05t0516800-01)
Sequence	MSAAAGGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQ VDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTD PSIVCMLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQ IVNKKPVEAPEDGSAGPGKGEKINVKDDVSAMKRVGCCSN

Transcript Sequence

Transcript ID	Os05t0516800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25625109:25627147:-1 gene:Os05g0516800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab11D3 description:Similar to Ras-related protein RIC2. (Os05t0516800-01)
Sequence	GCGAGATCCAAAATCCGACCAGCCAGCGTTAGCTCGGAGAGGCGAGGCGAGAATGTCGGC CGCGGCGGGCGGGTACAGGGCGGAGGACGACTACGACTACCTGTTCAAGGTGGTGCTCAT CGGCGACTCCGGCGTCGGCAAGTCCAACCTCCTCTCCCGCTTCACCAAGAACGAGTTCAG CCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCCTCCAGGTCGACGG CAAGGTCATCAAGGCCCAGATTTGGGACACCGCCGGCCAGGAGAGGTATCGTGCTATCAC TAGTGCCTATTACCGGGGAGCTGTGGGAGCATTGCTCGTCTACGATGTCACCCGTCGTGC TACATTCGACAACGTGGGACGCTGGCTAAGGGAGCTTAGAGACCACACTGATCCTAGCAT TGTCTGCATGCTGATTGGCAACAAATCCGATCTCCGCCACTTGGTGGCTGTCTCAACCGA GGACGGCAAAGAGTTTGCTGAAGCCGAATCAATGTACTTCATGGAAACTTCTGCGCTCGA CGCTACCAACGTCGACAATGCGTTCGCGGAGGTCCTGACTCAGATATACCAGATTGTGAA CAAGAAGCCGGTGGAGGCACCTGAGGATGGGTCGGCTGGCCCAGGAAAAGGAGAGAAGAT AAACGTGAAAGATGATGTCTCGGCGATGAAGAGAGTTGGATGTTGCTCAAACTAAAGACA AGAGGGACACAATTTATTCATTTTTCCAAGTAGGGATGCTCAGGGTATACTGTAATAGAT CTATTCAATTGTCTCATTTCTGGTGTTGTTATTGAGGGTTAGGGTGATCCAACTATCATT CAAACTATCAGTTCTTGATTTGCTCTTTGTATCAAACTGATCATGGTGTTGTTATCTATC ACTGCAATGCAAGTATTATGTTGACAGAAGAAGCATATATCCATTGTTTGAGAGTGTCTG CTCTGATT