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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0516100-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:25589277:25589836:-1 gene:Os05g0516100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0516100-01)
Sequence

ATGGAGACCGAGCCGTCGACGCCGATGACGCAGTCGTCCTACTTCGCCGGCTGCATGGGC
TCGCCGGCGTGGCTGCCGGCGGTGCAGAGGAGCCCCGCGCGGTTCCACCTCCTCTCGCGC
GACGCCGCCGCCGGCCGCGACGACGGCGGCCGGCGAGCGTGGAGCCGGCTGCTGAGGAGG
CTGGTGCGGGAGAGCAGGAGCTTCTGCAGCCTCGGCAGCAGGCACGGCGGCGCCATGGCC
GCCGCCACCACCACCTTCCACTACGACGCCGCCAGCTACGCCAAGAACTTCGACGACGGC
CGACGCGCCCACTACGCCGCCTCCGCCCAAGCGCCGCCGCCGGTCGCCGGAGCTAGCTAG

Peptide Sequence

PEP ID

Os05t0516100-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:25589277:25589836:-1 gene:Os05g0516100 transcript:Os05t0516100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0516100-01)
Sequence

METEPSTPMTQSSYFAGCMGSPAWLPAVQRSPARFHLLSRDAAAGRDDGGRRAWSRLLRR
LVRESRSFCSLGSRHGGAMAAATTTFHYDAASYAKNFDDGRRAHYAASAQAPPPVAGAS

Transcript Sequence

Transcript ID

Os05t0516100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:25589277:25589836:-1 gene:Os05g0516100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0516100-01)
Sequence

GCTCACAATCTCTCTCTCTCTCACACACACACACATCTCTCGATCGCTTGGACGAGGCAG
CGAGCGAGCCATGGAGACCGAGCCGTCGACGCCGATGACGCAGTCGTCCTACTTCGCCGG
CTGCATGGGCTCGCCGGCGTGGCTGCCGGCGGTGCAGAGGAGCCCCGCGCGGTTCCACCT
CCTCTCGCGCGACGCCGCCGCCGGCCGCGACGACGGCGGCCGGCGAGCGTGGAGCCGGCT
GCTGAGGAGGCTGGTGCGGGAGAGCAGGAGCTTCTGCAGCCTCGGCAGCAGGCACGGCGG
CGCCATGGCCGCCGCCACCACCACCTTCCACTACGACGCCGCCAGCTACGCCAAGAACTT
CGACGACGGCCGACGCGCCCACTACGCCGCCTCCGCCCAAGCGCCGCCGCCGGTCGCCGG
AGCTAGCTAGCTAGAGGGTTTCTTGATCTTTTCTTTTCCTTTTTTTGTTTCTTTTTTCCT
TCTTTTTTATTTGGTGGTTCGCTTGTAGCTATTAATTAGCTCTGTTCTTGAAATGGTAGT
TGAAGTGTTGATTTTCGTGG