Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0515700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25575639:25579739:1 gene:Os05g0515700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vascular plant one zinc finger protein 2 description:Target protein of bacterial effector, Xoo virulence (Os05t0515700-01)
Sequence	ATGGCCGGCGATCCGGCCGCCGGCGGCGACGGCGGCCGTGGCTCCTCAGGCGGCAAGGGC TCGTCCCCCTCCTCCTCGCGGCACCAGCAGTTCCGCAACCTCGCCAAGACCCGCGTCGAC GACCTCCAGGAGATGTTCTCCGGCCTCCAGTCCGCCCGCAAGGAGAGCCGCTCCGCCGAC GCCGCCCTCCTCGAGGAGCAGGTCCACCACATGCTCCGGGAGTGGCGCGCCGAGCTCAAC GTCCCCTCCCCCGCCTCCTCCCTCCAGAACTCTCAGTCGCAGGGTAACAACCGGGAGGCG TCGGATCCGCCATCGGAGACGCTGCGGTTGCTGCAGCTGGCCGGGGCCGAGGAGGAGGAT GACGCCACCAGCAAGCTCGTGATGCCGCGATCGCCTATGCCGATGCAATCTTCTCATGAG GGCCATAATCTCAGCCCCGTGCTACAGGGGGGGACTATGGCGGGGGGAGCCGCTGAGCTG ATGGTTCCCCGATCGCCGCTGCAGCAAATGCCATCTTCTCATCAGAGCCATGGGCATGGG CAGGATGGCGGCCAGAATCTGCAGGGTGAGGCTGTCATGGGAAGTACTGCTGCTACTGCT GCCCCGCATCTGGGTCAGGGAATGCAGGGCGATTGCGGAGGAATGGCTGGTGTTACCAAT GCAATGTTCCATGATCAGCTGTACTATATAGATCATGAACTCAACATTGATGATTTTCTT CAAGATGATGATTATAAGATAAATCTTCCTGGCTCAAACCCAGACGGCCCCAATACCATG CAGGGGATTGGTCAGCTGGAACATCAACAGTACAACCTGCCATTAGATCTGCCACCTAAC TCATTTGTTGATGCAAATAACTCTGCGCAGAGTTCTGGAGATGTTTTTTTCCACATGTCA GACTTGCTCACAACAATGTGCCCATCACCTTCTCAATATTTGGGGCCAAAATGTGCACTC TGGGACTGCGGTCGACCTGTTCGAGGATCAGATGAGTGTCAACATTACTGCAATCCTTAC CATGCCGGTTTAGCTTTGAATGATGATGGCCTTCTAGGGACTAGACCTGTGATGCGTCCA AGGGGGATTGATTTGAAAGATGGCCCTCTGTTTGCTGCTCTTAGTGCAAAAGTCCAAGGA AAAAATGTTGGTATTCCTGTGTGTGAAGGGGCTGCAACTACAAAATCTCCTTGGAATGCA CCTGAGCTTTTCGATCTATCTCTTCTTGAAGGTGAATCTCTTAGAGAATGGCTATTCTTT GACACACCAAGACGGGCATTTGATAGCGGCAATCGGAAGCAAAGGTCATTGCCAGATTAC AATGGCCGTGGATGGCATGAATCAAGGAAGCAAGTGATGAAAGATTTTGGAGGTCTGAAG AGGTCCTATTACATGGATCCACAACCATCCAGCAACTATGAGTGGCATCTTTTTGAATAT GAAACCAATGATTCTGATGCTCTAGCGCTGTATCGGCTTGAGTACAAGTCTTCTGATACT AAGAGGAGTGTTAAATCAAAATTGGCAAGCAGTCCACTGAGTGAAATACAGCAGCAAATG GTCAGGCTTAGTGCAGACAGTCCTGTGGAAAGCAAACGGACTGCTAGGAGCAGGGCAAAG GCTAATCAAAAGGATAACAATTCAAACGCCTATCCAGCTCTCAATACCCCTGTTCAAGTC AGTGCTTCAAATGCTCATCAAACAATGTCTGTCAACACCCCTGATCAGGTCAATGTTTCA AATGCATATCAAACAATGCCTCTCAACACCCCAAATCAACCCGGTCCTTCTAATGCTTAT CATGCAGCATCACAGATGGACCAGATGACGTTTCTGGATGGCAGTGTTGTTTATGGACCT CATCTTCCATATGGATACTCCACCGAAAGAAGCGATTTCTACTGGAACCCTAGTGACGGG ACATGA

Peptide Sequence

PEP ID	Os05t0515700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25575639:25579739:1 gene:Os05g0515700 transcript:Os05t0515700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vascular plant one zinc finger protein 2 description:Target protein of bacterial effector, Xoo virulence (Os05t0515700-01)
Sequence	MAGDPAAGGDGGRGSSGGKGSSPSSSRHQQFRNLAKTRVDDLQEMFSGLQSARKESRSAD AALLEEQVHHMLREWRAELNVPSPASSLQNSQSQGNNREASDPPSETLRLLQLAGAEEED DATSKLVMPRSPMPMQSSHEGHNLSPVLQGGTMAGGAAELMVPRSPLQQMPSSHQSHGHG QDGGQNLQGEAVMGSTAATAAPHLGQGMQGDCGGMAGVTNAMFHDQLYYIDHELNIDDFL QDDDYKINLPGSNPDGPNTMQGIGQLEHQQYNLPLDLPPNSFVDANNSAQSSGDVFFHMS DLLTTMCPSPSQYLGPKCALWDCGRPVRGSDECQHYCNPYHAGLALNDDGLLGTRPVMRP RGIDLKDGPLFAALSAKVQGKNVGIPVCEGAATTKSPWNAPELFDLSLLEGESLREWLFF DTPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSNYEWHLFEY ETNDSDALALYRLEYKSSDTKRSVKSKLASSPLSEIQQQMVRLSADSPVESKRTARSRAK ANQKDNNSNAYPALNTPVQVSASNAHQTMSVNTPDQVNVSNAYQTMPLNTPNQPGPSNAY HAASQMDQMTFLDGSVVYGPHLPYGYSTERSDFYWNPSDGT

Transcript Sequence

Transcript ID	Os05t0515700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25575639:25579739:1 gene:Os05g0515700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vascular plant one zinc finger protein 2 description:Target protein of bacterial effector, Xoo virulence (Os05t0515700-01)
Sequence	AGGACTTTGCTCACCAAATTTCGTCAACCGAAGGAGAGTCCTCTTCTTCGCCCACCAAAC CCCATTCCAATCACACCGCCGCCGCCGCCACTTTGATCGGCAGGATGGCCGGCGATCCGG CCGCCGGCGGCGACGGCGGCCGTGGCTCCTCAGGCGGCAAGGGCTCGTCCCCCTCCTCCT CGCGGCACCAGCAGTTCCGCAACCTCGCCAAGACCCGCGTCGACGACCTCCAGGAGATGT TCTCCGGCCTCCAGTCCGCCCGCAAGGAGAGCCGCTCCGCCGACGCCGCCCTCCTCGAGG AGCAGGTCCACCACATGCTCCGGGAGTGGCGCGCCGAGCTCAACGTCCCCTCCCCCGCCT CCTCCCTCCAGAACTCTCAGTCGCAGGGTAACAACCGGGAGGCGTCGGATCCGCCATCGG AGACGCTGCGGTTGCTGCAGCTGGCCGGGGCCGAGGAGGAGGATGACGCCACCAGCAAGC TCGTGATGCCGCGATCGCCTATGCCGATGCAATCTTCTCATGAGGGCCATAATCTCAGCC CCGTGCTACAGGGGGGGACTATGGCGGGGGGAGCCGCTGAGCTGATGGTTCCCCGATCGC CGCTGCAGCAAATGCCATCTTCTCATCAGAGCCATGGGCATGGGCAGGATGGCGGCCAGA ATCTGCAGGGTGAGGCTGTCATGGGAAGTACTGCTGCTACTGCTGCCCCGCATCTGGGTC AGGGAATGCAGGGCGATTGCGGAGGAATGGCTGGTGTTACCAATGCAATGTTCCATGATC AGCTGTACTATATAGATCATGAACTCAACATTGATGATTTTCTTCAAGATGATGATTATA AGATAAATCTTCCTGGCTCAAACCCAGACGGCCCCAATACCATGCAGGGGATTGGTCAGC TGGAACATCAACAGTACAACCTGCCATTAGATCTGCCACCTAACTCATTTGTTGATGCAA ATAACTCTGCGCAGAGTTCTGGAGATGTTTTTTTCCACATGTCAGACTTGCTCACAACAA TGTGCCCATCACCTTCTCAATATTTGGGGCCAAAATGTGCACTCTGGGACTGCGGTCGAC CTGTTCGAGGATCAGATGAGTGTCAACATTACTGCAATCCTTACCATGCCGGTTTAGCTT TGAATGATGATGGCCTTCTAGGGACTAGACCTGTGATGCGTCCAAGGGGGATTGATTTGA AAGATGGCCCTCTGTTTGCTGCTCTTAGTGCAAAAGTCCAAGGAAAAAATGTTGGTATTC CTGTGTGTGAAGGGGCTGCAACTACAAAATCTCCTTGGAATGCACCTGAGCTTTTCGATC TATCTCTTCTTGAAGGTGAATCTCTTAGAGAATGGCTATTCTTTGACACACCAAGACGGG CATTTGATAGCGGCAATCGGAAGCAAAGGTCATTGCCAGATTACAATGGCCGTGGATGGC ATGAATCAAGGAAGCAAGTGATGAAAGATTTTGGAGGTCTGAAGAGGTCCTATTACATGG ATCCACAACCATCCAGCAACTATGAGTGGCATCTTTTTGAATATGAAACCAATGATTCTG ATGCTCTAGCGCTGTATCGGCTTGAGTACAAGTCTTCTGATACTAAGAGGAGTGTTAAAT CAAAATTGGCAAGCAGTCCACTGAGTGAAATACAGCAGCAAATGGTCAGGCTTAGTGCAG ACAGTCCTGTGGAAAGCAAACGGACTGCTAGGAGCAGGGCAAAGGCTAATCAAAAGGATA ACAATTCAAACGCCTATCCAGCTCTCAATACCCCTGTTCAAGTCAGTGCTTCAAATGCTC ATCAAACAATGTCTGTCAACACCCCTGATCAGGTCAATGTTTCAAATGCATATCAAACAA TGCCTCTCAACACCCCAAATCAACCCGGTCCTTCTAATGCTTATCATGCAGCATCACAGA TGGACCAGATGACGTTTCTGGATGGCAGTGTTGTTTATGGACCTCATCTTCCATATGGAT ACTCCACCGAAAGAAGCGATTTCTACTGGAACCCTAGTGACGGGACATGAAGATAGCATA TTGGGTTTCATACATTCTACTGCATCTGTCAGCTGGGAATTTTAACAGCATCAGCTAAAT TATGGGGCTCAACAGTGTGGCCCAAAAGTTTTCTGATTGTATGACCTCTTTTAAAGATGG CATGTTTGCAATACAGTGCTATACTTTGCATTAACACTTGACTGTAAAAATATATCCCAG CACGCCCTAGCTCCTGTTGATGGCAAGTTAAATGGTCAAATGGCTTTTACCAGGAACCAA TGCTGCTGTGCTGGGTGTATTTTTAGCTTAGCCTGAAGCCTTATGAAGTTCTGAACTTCT GAAGGTTTCGTTTTATCCTTTGTATATACCCTGATTTTCTGAGGCGTTGTGGCATCC