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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0512500-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:25392886:25396045:-1 gene:Os05g0512500 gene_biotype:protein_coding transcript_biotype:protein_coding description:CT20 family protein. (Os05t0512500-01)
Sequence

ATGGAGGCGGCCGCCGACGAGGAGCAGGAGGGGATCTCCGCCCAGTCGCCGGCCCAGGCG
CCGCCCTCCTCCGCCTCGTCCCTTCCCAAGGAGCAATCGCAGGTGGAGCTGGAGCTGCGG
GTGCTTCAGGCTCTCGAGTTCTACCCTCCGTCCAAACTGAAAGGCATTCATCGTCACTTT
GTTATCTATGGTCTAATGGAATACTTGAGAAAAAGTCTTGATAGACAATTCTCTGCTGAT
GAAGTTTTACAACTACTGGACCGATTCTTCAACCTAGAAATGCTGAAGCCAGAGGACGAC
GAGAAGGATAACTTCACTCAAGGAGAAGAATTTTCCTTACCTGAAAGTTTCTTTAACAAG
GACGAATGA

Peptide Sequence

PEP ID

Os05t0512500-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:25392886:25396045:-1 gene:Os05g0512500 transcript:Os05t0512500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CT20 family protein. (Os05t0512500-01)
Sequence

MEAAADEEQEGISAQSPAQAPPSSASSLPKEQSQVELELRVLQALEFYPPSKLKGIHRHF
VIYGLMEYLRKSLDRQFSADEVLQLLDRFFNLEMLKPEDDEKDNFTQGEEFSLPESFFNK
DE

Transcript Sequence

Transcript ID

Os05t0512500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:25392886:25396045:-1 gene:Os05g0512500 gene_biotype:protein_coding transcript_biotype:protein_coding description:CT20 family protein. (Os05t0512500-01)
Sequence

AGCCTGCGTGGTCCAGCTTCCCCTCCCCTCGGGTTTCCGGCGTGCTAGGGCTCGGCCGCG
GTGGCGAAGGCGAAAGGGAGCTCGGGGATGGAGGCGGCCGCCGACGAGGAGCAGGAGGGG
ATCTCCGCCCAGTCGCCGGCCCAGGCGCCGCCCTCCTCCGCCTCGTCCCTTCCCAAGGAG
CAATCGCAGGTGGAGCTGGAGCTGCGGGTGCTTCAGGCTCTCGAGTTCTACCCTCCGTCC
AAACTGAAAGGCATTCATCGTCACTTTGTTATCTATGGTCTAATGGAATACTTGAGAAAA
AGTCTTGATAGACAATTCTCTGCTGATGAAGTTTTACAACTACTGGACCGATTCTTCAAC
CTAGAAATGCTGAAGCCAGAGGACGACGAGAAGGATAACTTCACTCAAGGAGAAGAATTT
TCCTTACCTGAAAGTTTCTTTAACAAGGACGAATGATAGCCCAGTAACCCTGCAGCGCAA
CATCCTTCGTAATTTAACAGAGGGGACTACGAATCTTATGATGTTTCCAATGATTCTCTT
GCGTAGACATCTCTTGACGGCACACTTCGAACTGAAAGAACACATTTTGCTCGGCCGTGT
CTTTGTGTTAGTGCTTACTGTGACTTGTACAGCTTCTGTTGACTTAGGATATGCAGTCAA
TGGTACGGGATCTCAGTACCCGTTAACTATC