Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0512200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25382364:25385526:1 gene:Os05g0512200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T4P13.26 protein. (Os05t0512200-01)
Sequence	ATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGC CGGGGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCC GTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCC GAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGC CGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCA CTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGC GGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAG CTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTC TTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGG AGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAA GACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCT GAAGTTGGGATTGGACCCTATGTGGAGGTGGCATTCTACCACAAGCCTTCGCGGACATTG TTGGTGACGGATGCCGTCATTTTTGTTCCTCGGCAGCCACCTGAGTGTATCAGCAAAGAG TCGTTGCTGGCATCTGCCAAGAACGGCTTGGCAGTGAAGATTTTGAGCAAAGGAAAAGAG GTCCCAGATGAACCAGTTGTGGACAATAAGCTGAACCGTCAGAAAGGATGGGAGCGAATG GTACTGCAAATATTGTTTCTTGGTCCCTCAAATCTTCTGGAGCCAAACGCAAGTTTTGCT CAAATGTCTCAGAAGTTGATTGTCTCCCCAATTGTGAAGACACTTGTTTTCAGCAAAGTT CCAGAGAAGGTGAGAGACTGGGTCGACAGGATCGCTGCAGACTGGCCATTCAGGAGGATA ATCCCAGCTCACTTCGCAGCTCCGATTAACGCGAACCGGTCCGACTTCTTGGCTGCCTTT GCTTTCCTAGATGAGTTCCTCCCCGAGCGATCTCCAGCATCGCCCGGCCTCTCACTCCTC TTTGCCTCGCTCATGGGCAAGGCGGCGAGCTACTTCCCCCCTGATGACATGAAGACCCTG TCATCCCTGGACGAGTTCTTGGTTTCAGTTGGTGCTGTCAAGAAGACAGTTTCAGGCAGA AAGCGATGA

Peptide Sequence

PEP ID	Os05t0512200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25382364:25385526:1 gene:Os05g0512200 transcript:Os05t0512200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T4P13.26 protein. (Os05t0512200-01)
Sequence	MAASAAAVASTAPPQPLRPRRGIAVPSSYSHRAATRPRLAVSASSTTTGTTETTSERGGA ERFYFNFTGFPFPLGPFLNRRTIRTEAVKGRIWLFEQEQALGFSSVSTNTRMTVIKLKSG GLWVHAPIAPTKECIQLLKELDAPVEHIVLPTFAYEHKVFFGPFTRKFPRAQIWVAPRQW SWPINLPLEFFGIFRAKPLQDEDDDTPWAGEIEQKMLSSPEVGIGPYVEVAFYHKPSRTL LVTDAVIFVPRQPPECISKESLLASAKNGLAVKILSKGKEVPDEPVVDNKLNRQKGWERM VLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWVDRIAADWPFRRI IPAHFAAPINANRSDFLAAFAFLDEFLPERSPASPGLSLLFASLMGKAASYFPPDDMKTL SSLDEFLVSVGAVKKTVSGRKR

Transcript Sequence

Transcript ID	Os05t0512200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25382364:25385526:1 gene:Os05g0512200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T4P13.26 protein. (Os05t0512200-01)
Sequence	ACGCGCCTAGCCAGCTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGC CGCCGCAGCCGCTGCGGCCGCGCCGGGGGATAGCCGTGCCGTCGTCATACTCACACCGCG CGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGA CGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCC CGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATAT GGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGA CCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGG AGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCT TCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGA TATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGA TCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCG AGCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTGGACCCTATGTGGAGGTGGCATTCT ACCACAAGCCTTCGCGGACATTGTTGGTGACGGATGCCGTCATTTTTGTTCCTCGGCAGC CACCTGAGTGTATCAGCAAAGAGTCGTTGCTGGCATCTGCCAAGAACGGCTTGGCAGTGA AGATTTTGAGCAAAGGAAAAGAGGTCCCAGATGAACCAGTTGTGGACAATAAGCTGAACC GTCAGAAAGGATGGGAGCGAATGGTACTGCAAATATTGTTTCTTGGTCCCTCAAATCTTC TGGAGCCAAACGCAAGTTTTGCTCAAATGTCTCAGAAGTTGATTGTCTCCCCAATTGTGA AGACACTTGTTTTCAGCAAAGTTCCAGAGAAGGTGAGAGACTGGGTCGACAGGATCGCTG CAGACTGGCCATTCAGGAGGATAATCCCAGCTCACTTCGCAGCTCCGATTAACGCGAACC GGTCCGACTTCTTGGCTGCCTTTGCTTTCCTAGATGAGTTCCTCCCCGAGCGATCTCCAG CATCGCCCGGCCTCTCACTCCTCTTTGCCTCGCTCATGGGCAAGGCGGCGAGCTACTTCC CCCCTGATGACATGAAGACCCTGTCATCCCTGGACGAGTTCTTGGTTTCAGTTGGTGCTG TCAAGAAGACAGTTTCAGGCAGAAAGCGATGATACGGAGAGATACTGGCAGATGTGTTGT TCATAGTTTTGTGTTGAGATGAGCTTGTTGCTGCTGTACATGGTTAACACTACTAAACTG TACTCCCTCCATTTCACAATTTAAGTCATTCTAGCATTTCCCACATTCATATTGAAGTTA ATGAATCTAGACATATATATCTATCTAGATTCATTAACATCAATATGAATGTGGAAAATG CTAAAATGACTTACATTGTGAAATGGAGGAAGTATGTAGTTAGCCTTTATCCAGGATTAT ATTGTATATACCTTACTGCAGTCTATAGAAGAGGCCAAAATGTTTAC