Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0511400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25331884:25339595:-1 gene:Os05g0511400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase GhCLK1 (Fragment). (Os05t0511400-01)
Sequence	ATGGATTCCGCGAGAAGTTGGTTCCAGAAGTTCCAGCCGAGGGACAAATCGAAGAGTCCA GCGGTGGCTGCCAGTCATGGAAAGGATCCAGGAAAGCCACCAATTGATGACGCGCCATCT AGTGCAACAAAACAGAGGGTTGCCGCGGCAAAACAGTACATTGAGAATCATTACAAGACC CAGATGAAGTCCCTGCAAGATAGGAAAGAAAGGCGCTGGATGTTGGAGAGGAAACTACAG GATGCAGAGGTTCCTGTAGAAGAGCAAAATAATATTCTAAAGCATTTGGAGAAAAAGGAG ACCGAATATATGCGGTTGCAGAGACATAAGATGGGGGTTGAAGATTTTGAACTTTTGACA ATTATTGGAAGAGGTGCATTTGGCGAGGTGCGTCTTTGTAGAGAGAAGGCGTCTAAGAAT GTATATGCAATGAAAAAGCTTAAGAAATCTGAGATGCTTCGTAGGGGCCAGGTTGAGCAT GTCAAAGCTGAAAGAAACCTTCTTGCAGAAGTTGATAGTGCTTTTATAGTCAAGCTCTAC TATTCTTTTCAAGATGAAGAATACTTGTATCTCATCATGGAGTACCTTCCTGGTGGTGAC ATGATGACTTTGCTTATGCGCAAGGACACACTGACAGAAGATGAGGCCAGATTTTACATT GCAGAAACCGTATTAGCAATAGAATCTATTCACAAGCACAGCTACATTCACCGGGATATC AAACCAGACAATCTATTGTTAGATCGCAGTGGTCACTTGAAGCTTTCTGACTTTGGATTG TGTAAACCTTTGGATAGCAGTAATTTTCCAAATTTGAATGAGCCAGATTATACATCTACA AAGGGCACCAAGCCTTTACCTGATAGTAGCAGCCGGTTAAGCTCTTCTGCTCTAAAGCGC ACACAGCAGGAGCAATTGTCGCATTGGCAAAAGAACCGACGAATGCTGGCATATTCAACG GTTGGTACTCCTGATTACATTGCTCCAGAGGTTCTGCTGAAGAAAGGATATGGAATGGAA TGTGACTGGTGGTCCCTTGGTGCAATTATGTATGAAATGCTTGTTGGTTATCCTCCATTC TATTCGGAGGATCCAATGTCAACCTGCAGAAAGATTGTAAACTGGAGAAGTCACTTGAAA TTCCCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGATCTCATCAGCAAACTTCTATGT AATGTTGAGCAGAGACTTGGAACAAAAGGAGCCCATGAGATAAAAGCACATCCATGGTTT AGAGGTCTCCCATGGGAAAGATTGTATCAGATGAAAGCTGCTTTCATACCAGAAGTTAAC AGCGAGTTGGATACTCAGAATTTTGAGAAATTTGAGGAGACCGGAGCACAAATTCAAAGT TCATCTAAGTCAGGTCCATGGAGAAAGATGCTTCCGTCCAAGGATGCAAACTTTGTTGGC TATACATATAAGAATTTTGAAATTGTAAATGATGATGAGGTTGCAGGAATTGCTGAGTTG AAGAAGAAGAGTTCCAAGTCAAAGCGGCCAACTATCAAGACATTATTTGAGAGCATGGAT GAAGATGAGCCTGTTCAAGGAAGTTTCTTAAATATGTTGCCCCATAAGGAGGGGCAACCT TCATCTCACTCCACCATTCCACCAGAACAATACCAACCTCGACATAAATAG

Peptide Sequence

PEP ID	Os05t0511400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25331884:25339595:-1 gene:Os05g0511400 transcript:Os05t0511400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase GhCLK1 (Fragment). (Os05t0511400-01)
Sequence	MDSARSWFQKFQPRDKSKSPAVAASHGKDPGKPPIDDAPSSATKQRVAAAKQYIENHYKT QMKSLQDRKERRWMLERKLQDAEVPVEEQNNILKHLEKKETEYMRLQRHKMGVEDFELLT IIGRGAFGEVRLCREKASKNVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAFIVKLY YSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYIAETVLAIESIHKHSYIHRDI KPDNLLLDRSGHLKLSDFGLCKPLDSSNFPNLNEPDYTSTKGTKPLPDSSSRLSSSALKR TQQEQLSHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF YSEDPMSTCRKIVNWRSHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAHEIKAHPWF RGLPWERLYQMKAAFIPEVNSELDTQNFEKFEETGAQIQSSSKSGPWRKMLPSKDANFVG YTYKNFEIVNDDEVAGIAELKKKSSKSKRPTIKTLFESMDEDEPVQGSFLNMLPHKEGQP SSHSTIPPEQYQPRHK

Transcript Sequence

Transcript ID	Os05t0511400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25331884:25339595:-1 gene:Os05g0511400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase GhCLK1 (Fragment). (Os05t0511400-01)
Sequence	GCTGCCTGCTTTGCCCACGAAAAGACAACCCAACCCGGCGAGTCGTAGCAGAGTAGAGAG AGAAAGAGGAGGAGGAGGAAAAAAAATAAAATTAAGGCAGTTCGTTCGTTCCCCACTTTT GCCTGCTCCAATCGCCGCCCCCCGCCCCGCCGCCTCGTCGCCCGCCCGAGATCCGCTCCG CGTTGCCTCCCGCCGCCGCCGAGATAGAGGCATCGTTCCCAGCATTGGGTTCCACGGAGA ATTGCCAATTTGGATATCTGATCCAATTGTTAGTTGGATTGACCGTTTCAGAGTGCCTGC AGTTGGCTGCTGGATTGGTCAATATAAGAAAACCGTTGGTTTCGGAGATGATGCCATTGT GAGTGGAAATGGATTCCGCGAGAAGTTGGTTCCAGAAGTTCCAGCCGAGGGACAAATCGA AGAGTCCAGCGGTGGCTGCCAGTCATGGAAAGGATCCAGGAAAGCCACCAATTGATGACG CGCCATCTAGTGCAACAAAACAGAGGGTTGCCGCGGCAAAACAGTACATTGAGAATCATT ACAAGACCCAGATGAAGTCCCTGCAAGATAGGAAAGAAAGGCGCTGGATGTTGGAGAGGA AACTACAGGATGCAGAGGTTCCTGTAGAAGAGCAAAATAATATTCTAAAGCATTTGGAGA AAAAGGAGACCGAATATATGCGGTTGCAGAGACATAAGATGGGGGTTGAAGATTTTGAAC TTTTGACAATTATTGGAAGAGGTGCATTTGGCGAGGTGCGTCTTTGTAGAGAGAAGGCGT CTAAGAATGTATATGCAATGAAAAAGCTTAAGAAATCTGAGATGCTTCGTAGGGGCCAGG TTGAGCATGTCAAAGCTGAAAGAAACCTTCTTGCAGAAGTTGATAGTGCTTTTATAGTCA AGCTCTACTATTCTTTTCAAGATGAAGAATACTTGTATCTCATCATGGAGTACCTTCCTG GTGGTGACATGATGACTTTGCTTATGCGCAAGGACACACTGACAGAAGATGAGGCCAGAT TTTACATTGCAGAAACCGTATTAGCAATAGAATCTATTCACAAGCACAGCTACATTCACC GGGATATCAAACCAGACAATCTATTGTTAGATCGCAGTGGTCACTTGAAGCTTTCTGACT TTGGATTGTGTAAACCTTTGGATAGCAGTAATTTTCCAAATTTGAATGAGCCAGATTATA CATCTACAAAGGGCACCAAGCCTTTACCTGATAGTAGCAGCCGGTTAAGCTCTTCTGCTC TAAAGCGCACACAGCAGGAGCAATTGTCGCATTGGCAAAAGAACCGACGAATGCTGGCAT ATTCAACGGTTGGTACTCCTGATTACATTGCTCCAGAGGTTCTGCTGAAGAAAGGATATG GAATGGAATGTGACTGGTGGTCCCTTGGTGCAATTATGTATGAAATGCTTGTTGGTTATC CTCCATTCTATTCGGAGGATCCAATGTCAACCTGCAGAAAGATTGTAAACTGGAGAAGTC ACTTGAAATTCCCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGATCTCATCAGCAAAC TTCTATGTAATGTTGAGCAGAGACTTGGAACAAAAGGAGCCCATGAGATAAAAGCACATC CATGGTTTAGAGGTCTCCCATGGGAAAGATTGTATCAGATGAAAGCTGCTTTCATACCAG AAGTTAACAGCGAGTTGGATACTCAGAATTTTGAGAAATTTGAGGAGACCGGAGCACAAA TTCAAAGTTCATCTAAGTCAGGTCCATGGAGAAAGATGCTTCCGTCCAAGGATGCAAACT TTGTTGGCTATACATATAAGAATTTTGAAATTGTAAATGATGATGAGGTTGCAGGAATTG CTGAGTTGAAGAAGAAGAGTTCCAAGTCAAAGCGGCCAACTATCAAGACATTATTTGAGA GCATGGATGAAGATGAGCCTGTTCAAGGAAGTTTCTTAAATATGTTGCCCCATAAGGAGG GGCAACCTTCATCTCACTCCACCATTCCACCAGAACAATACCAACCTCGACATAAATAGG ATAAGGAGGTTTTCAAAAGTAAAACACAGATAATTAAAACAAGAAAAAAATTGGTTCCTT TTGATCTTGTTTCCCGTCCAAGCTTTGTAAATTCTAACCGATGCTTTCTCTTCTCAAATT CTTCATACAAAAATCCCTCCTCTGTCCAAAGAGTGGTGTTTGCTGTACGCGGCGATGTTT GTTTGGTTCGCCGTGTGTTTGGGTTACAGCTTCGGTGATGATGGGTCTCAGGTTACAGCT AGTGTATACTTGCTACCATTTCTGACGGGCATGTGTATTGCAATTAAATTCACCCCTCTT TTGTTCTGC