Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0510800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25300845:25304673:-1 gene:Os05g0510800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE C7 description:Similar to Cellulose synthase-like family C1 protein. (Os05t0510800-01)
Sequence	ATGGCGCCGTCGTGGTGGGGGAGGAGTGGAGGAGGAGGAGTCGGCAATGGGGGTGGCACG CCGGTGGTGGTGAAGATGGAGAATCCGAACTGGTCAATCTCGGAGGTGGAGGCGGCGGAG GTGGCGCCGGGTTCGCCGGCGGGGGCGGGCAAGGCCGGGCGCGGCAAGAACGCGCGCCAG ATCACGTGGGTGCTGCTGCTCAAGGCGCACCGCGCCGCGGGGCGGCTCACGGGCGCCGCG TCCGCCGCGCTCGCCGTCGCGTCCGCGGCGAGGCGCAGGGTGGCGTCCGGGCGGACCGAC GCCGACGCCGCGCCGGGGGAGAGCACGGCGCTGCGGGCGCGCTCCTACGGCTGCATCCGG GTGTCCCTCGTCCTGTCTCTGCTGCTGCTCGCCGTCGAGGTCGCCGCCTACCTCCAGGGG TGGCACCTCGAGGAGGTGGCGTCGCTCCTCGCCGTCGACGGCCTCTTCGCCGCCTCCTAC GCCGGGTGGATGCGCCTCCGCCTCGACTACCTCGCGCCGCCGCTCCAGTTCCTCACCAAC GCCTGCGTCGCCCTCTTCATGGTCCAGAGCATCGACCGCCTCGTCCTCTGCCTCGGCTGC TTCTGGATCAGGTTCAAGGGCATCAAGCCCGTGCCGCAGGCCGCCGCCGCCGGCAAGCCG GACGTCGAGGCTGGCGCCGGCGACTACCCCATGGTGCTCGTCCAGATGCCCATGTGCAAC GAGAGAGAGGTGTACCAGCAATCCATTGGGGCAGTTTGCAACCTGGACTGGCCAAAGTCA AACTTCTTGGTGCAGGTGTTGGACGATTCTGATGATGCTACCACTTCTGCGCTGATCAAG GAGGAGGTGGAGAAATGGCAGCGGGAGGGCGTGCGCATCATATACCGGCACCGGGTGATC CGGGATGGCTACAAGGCTGGAAACCTTAAATCAGCCATGAATTGCAGTTATGTGAAGGAT TATGAGTTTGTTGTCATATTTGATGCCGATTTCCAACCACAAGCCGATTTCCTGAAGCGA ACCGTGCCACATTTCAAGGGGAAGGATGACGTTGGGTTGGTTCAGGCAAGATGGTCTTTC GTAAACAAGGATGAGAACCTGCTGACTAGACTACAGAACGTAAATTTGTGCTTCCACTTT GAGGTGGAGCAGCAGGTGAATGGTGCATTCCTCAACTTCTTTGGATTCAATGGAACTGCC GGAGTTTGGAGAATTAAGGCGCTTGAGGATTCGGGGGGCTGGATGGAGAGAACAACAGTG GAGGACATGGATATTGCTGTCCGAGCACATCTTAAGGGATGGAAGTTTGTCTTCCTGAAT GATGTTGAGTGTCAATGTGAGTTGCCAGAATCATATGAAGCGTACAGAAAGCAGCAACAC AGGTGGCACTCAGGTCCCATGCAATTGTTCAGACTCTGCTTTGTGGACATTATAAAATCT AAGATTGGGTTCTGGAAGAAGTTCAACCTCATATTCCTTTTCTTCCTCCTCCGCAAGCTC ATCCTACCCTTCTATTCATTCACACTTTTCTGTGTCATCCTTCCCATGACAATGTTTGTT CCTGAAGCTGAGCTCCCTGCCTGGGTTGTATGCTACATTCCAGCTACAATGTCCATCCTG AACATCCTCCCAGCCCCAAAATCTTTCCCATTCATTGTCCCATACCTTCTTTTCGAGAAC ACTATGTCCGTAACCAAGTTCAATGCCATGATTTCTGGATTGTTCCAGCTCGGGAGTGCC TATGAGTGGGTTGTCACCAAGAAATCAGGTCGTTCTTCGGAGGGCGATCTTGTTGGGCTA GTTGAGAAACACTCCAAGCAGCAAAGAGTAGGATCTGCTCCCAATCTTGACGCGCTAACA AAGGAGGAGTCGAATCCTAAAAAGGACTCCAAGAAGAAGAAGCACAATAGGATCTACAGG AAGGAACTGGCACTTTCCTTCCTCTTGTTAACGGCAGCAGCTCGCAGTTTGCTATCTGCT CAGGGAATCCATTTCTACTTTCTTCTGTTCCAAGGGGTCTCATTCTTGGTTGTTGGTCTC GACCTAATTGGTGAGCAAGTGGAGTGA

Peptide Sequence

PEP ID	Os05t0510800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25300845:25304673:-1 gene:Os05g0510800 transcript:Os05t0510800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE C7 description:Similar to Cellulose synthase-like family C1 protein. (Os05t0510800-01)
Sequence	MAPSWWGRSGGGGVGNGGGTPVVVKMENPNWSISEVEAAEVAPGSPAGAGKAGRGKNARQ ITWVLLLKAHRAAGRLTGAASAALAVASAARRRVASGRTDADAAPGESTALRARSYGCIR VSLVLSLLLLAVEVAAYLQGWHLEEVASLLAVDGLFAASYAGWMRLRLDYLAPPLQFLTN ACVALFMVQSIDRLVLCLGCFWIRFKGIKPVPQAAAAGKPDVEAGAGDYPMVLVQMPMCN EREVYQQSIGAVCNLDWPKSNFLVQVLDDSDDATTSALIKEEVEKWQREGVRIIYRHRVI RDGYKAGNLKSAMNCSYVKDYEFVVIFDADFQPQADFLKRTVPHFKGKDDVGLVQARWSF VNKDENLLTRLQNVNLCFHFEVEQQVNGAFLNFFGFNGTAGVWRIKALEDSGGWMERTTV EDMDIAVRAHLKGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFVDIIKS KIGFWKKFNLIFLFFLLRKLILPFYSFTLFCVILPMTMFVPEAELPAWVVCYIPATMSIL NILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVGL VEKHSKQQRVGSAPNLDALTKEESNPKKDSKKKKHNRIYRKELALSFLLLTAAARSLLSA QGIHFYFLLFQGVSFLVVGLDLIGEQVE

Transcript Sequence

Transcript ID	Os05t0510800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25300845:25304673:-1 gene:Os05g0510800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE C7 description:Similar to Cellulose synthase-like family C1 protein. (Os05t0510800-01)
Sequence	CTCCCGTACTACTAAGACCGACGTGGTGAGCTGTTCTTGTGCGCTCTGCTGCTGCCGCGG GTGGCCGGCTGGCTTATTAAGGTTGAGGAGTTCTTGATGAGTAGGTGAGGCCGGAGGAGG AGGAGCGATTGGTTGGTTGGTTGGTTGATTGGAGTTGTGAGAGGTTGTGTTGGCAATGGC GCCGTCGTGGTGGGGGAGGAGTGGAGGAGGAGGAGTCGGCAATGGGGGTGGCACGCCGGT GGTGGTGAAGATGGAGAATCCGAACTGGTCAATCTCGGAGGTGGAGGCGGCGGAGGTGGC GCCGGGTTCGCCGGCGGGGGCGGGCAAGGCCGGGCGCGGCAAGAACGCGCGCCAGATCAC GTGGGTGCTGCTGCTCAAGGCGCACCGCGCCGCGGGGCGGCTCACGGGCGCCGCGTCCGC CGCGCTCGCCGTCGCGTCCGCGGCGAGGCGCAGGGTGGCGTCCGGGCGGACCGACGCCGA CGCCGCGCCGGGGGAGAGCACGGCGCTGCGGGCGCGCTCCTACGGCTGCATCCGGGTGTC CCTCGTCCTGTCTCTGCTGCTGCTCGCCGTCGAGGTCGCCGCCTACCTCCAGGGGTGGCA CCTCGAGGAGGTGGCGTCGCTCCTCGCCGTCGACGGCCTCTTCGCCGCCTCCTACGCCGG GTGGATGCGCCTCCGCCTCGACTACCTCGCGCCGCCGCTCCAGTTCCTCACCAACGCCTG CGTCGCCCTCTTCATGGTCCAGAGCATCGACCGCCTCGTCCTCTGCCTCGGCTGCTTCTG GATCAGGTTCAAGGGCATCAAGCCCGTGCCGCAGGCCGCCGCCGCCGGCAAGCCGGACGT CGAGGCTGGCGCCGGCGACTACCCCATGGTGCTCGTCCAGATGCCCATGTGCAACGAGAG AGAGGTGTACCAGCAATCCATTGGGGCAGTTTGCAACCTGGACTGGCCAAAGTCAAACTT CTTGGTGCAGGTGTTGGACGATTCTGATGATGCTACCACTTCTGCGCTGATCAAGGAGGA GGTGGAGAAATGGCAGCGGGAGGGCGTGCGCATCATATACCGGCACCGGGTGATCCGGGA TGGCTACAAGGCTGGAAACCTTAAATCAGCCATGAATTGCAGTTATGTGAAGGATTATGA GTTTGTTGTCATATTTGATGCCGATTTCCAACCACAAGCCGATTTCCTGAAGCGAACCGT GCCACATTTCAAGGGGAAGGATGACGTTGGGTTGGTTCAGGCAAGATGGTCTTTCGTAAA CAAGGATGAGAACCTGCTGACTAGACTACAGAACGTAAATTTGTGCTTCCACTTTGAGGT GGAGCAGCAGGTGAATGGTGCATTCCTCAACTTCTTTGGATTCAATGGAACTGCCGGAGT TTGGAGAATTAAGGCGCTTGAGGATTCGGGGGGCTGGATGGAGAGAACAACAGTGGAGGA CATGGATATTGCTGTCCGAGCACATCTTAAGGGATGGAAGTTTGTCTTCCTGAATGATGT TGAGTGTCAATGTGAGTTGCCAGAATCATATGAAGCGTACAGAAAGCAGCAACACAGGTG GCACTCAGGTCCCATGCAATTGTTCAGACTCTGCTTTGTGGACATTATAAAATCTAAGAT TGGGTTCTGGAAGAAGTTCAACCTCATATTCCTTTTCTTCCTCCTCCGCAAGCTCATCCT ACCCTTCTATTCATTCACACTTTTCTGTGTCATCCTTCCCATGACAATGTTTGTTCCTGA AGCTGAGCTCCCTGCCTGGGTTGTATGCTACATTCCAGCTACAATGTCCATCCTGAACAT CCTCCCAGCCCCAAAATCTTTCCCATTCATTGTCCCATACCTTCTTTTCGAGAACACTAT GTCCGTAACCAAGTTCAATGCCATGATTTCTGGATTGTTCCAGCTCGGGAGTGCCTATGA GTGGGTTGTCACCAAGAAATCAGGTCGTTCTTCGGAGGGCGATCTTGTTGGGCTAGTTGA GAAACACTCCAAGCAGCAAAGAGTAGGATCTGCTCCCAATCTTGACGCGCTAACAAAGGA GGAGTCGAATCCTAAAAAGGACTCCAAGAAGAAGAAGCACAATAGGATCTACAGGAAGGA ACTGGCACTTTCCTTCCTCTTGTTAACGGCAGCAGCTCGCAGTTTGCTATCTGCTCAGGG AATCCATTTCTACTTTCTTCTGTTCCAAGGGGTCTCATTCTTGGTTGTTGGTCTCGACCT AATTGGTGAGCAAGTGGAGTGATAGAAGATGAAGAGTTTAATGGGGTTCTTTTTTGTTTG AAAGAAAACACTTTGCAAGCATCAAAGGGCTCTTTGTAAAGGGAAGAGTGATGCAAATGT TCGATGCTTACACATGGAAGCTTTGATCCCTATTCTAGGGGTCAAGATTCATCACATATA CTGAACTGTGGAGATGTAGATAGATATAGTTTGGATTAAGCCTGTGGGATGCTTTTATTC CTTCAGGCAATTCTTTTGTAAGAATCTTTTGTGCCTAGATGGGTTCTTCTTCTCTCTTAA CAAACTTTACCTTCAAATGAAGATAATACATGTTTCTACC