Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0510100-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:25266272:25267148:1 gene:Os05g0510100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os05t0510100-01)
Sequence

ATGGCGCAGCAGCAGAGGATGGTGATAGTGGGGGAGGAGCACTGCGGCGGCGGGGAGGAC
AGGGAGCTGACGGTGAGGAAGACGACGCTGTTCTGCCCCGGCGACGGGCTGGAGGCGTAC
GACCACGGGACGGGGACGCTGGCGTTCAGGGTGGAGACGTACGGGCGCGGCGGGGTGTGC
GGCGGCGGCGCGGCGGCGGGGGACCTGGCGCTGCTCGGCCCCGAGGGGGAGCCCGTGCTC
ACCGTCCGGCGCCGCCGCCCCAGCCTGCACCACCGCTGGGACGGGTTCCTCGGGGACGGC
GCCGCCTCGGGGCAGAAGCCGCTCTTCTCCGCCCGCCGCTCGTCCATCCTCGGCGTCGGC
TCAGGCGCCGCCGCCGTCCTCGTCGACCTCCTCGCCCCCGGCGCCGCCGGCGAGTTCCGC
GTCGACGGGTCCTTCCCGCGCCGCTGCTGCCGCGTGGTGGCCGTCAAGGCCGCTGCCCCC
GCCGGCGGCGGCGGGGAGGAGGAGGAGGAGGAGGTGGTGGTGGCGGAGGTCCGGAGGAAG
GTGGACGAGGACGCGCACGTGGTGATGGGGCGCGACGTGTTCGTGCTGTGGTTGCGCGCC
GGGTTCGACGCCGCGTTCGCCATGGGGATCGTGCTCGTTCTCGACCGGATCACCGGCGAC
GAGCTCAACGGCGACCTGAGCGAGGACCTCGCCGTCGCCAGTTCGCCGGTGTAA

Peptide Sequence

PEP ID

Os05t0510100-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:25266272:25267148:1 gene:Os05g0510100 transcript:Os05t0510100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os05t0510100-01)
Sequence

MAQQQRMVIVGEEHCGGGEDRELTVRKTTLFCPGDGLEAYDHGTGTLAFRVETYGRGGVC
GGGAAAGDLALLGPEGEPVLTVRRRRPSLHHRWDGFLGDGAASGQKPLFSARRSSILGVG
SGAAAVLVDLLAPGAAGEFRVDGSFPRRCCRVVAVKAAAPAGGGGEEEEEEVVVAEVRRK
VDEDAHVVMGRDVFVLWLRAGFDAAFAMGIVLVLDRITGDELNGDLSEDLAVASSPV

Transcript Sequence

Transcript ID

Os05t0510100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:25266272:25267148:1 gene:Os05g0510100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os05t0510100-01)
Sequence

GAGAGAGAGATTTGATTTGCGTTTGCGTTTTGCGTCCATGGCGCAGCAGCAGAGGATGGT
GATAGTGGGGGAGGAGCACTGCGGCGGCGGGGAGGACAGGGAGCTGACGGTGAGGAAGAC
GACGCTGTTCTGCCCCGGCGACGGGCTGGAGGCGTACGACCACGGGACGGGGACGCTGGC
GTTCAGGGTGGAGACGTACGGGCGCGGCGGGGTGTGCGGCGGCGGCGCGGCGGCGGGGGA
CCTGGCGCTGCTCGGCCCCGAGGGGGAGCCCGTGCTCACCGTCCGGCGCCGCCGCCCCAG
CCTGCACCACCGCTGGGACGGGTTCCTCGGGGACGGCGCCGCCTCGGGGCAGAAGCCGCT
CTTCTCCGCCCGCCGCTCGTCCATCCTCGGCGTCGGCTCAGGCGCCGCCGCCGTCCTCGT
CGACCTCCTCGCCCCCGGCGCCGCCGGCGAGTTCCGCGTCGACGGGTCCTTCCCGCGCCG
CTGCTGCCGCGTGGTGGCCGTCAAGGCCGCTGCCCCCGCCGGCGGCGGCGGGGAGGAGGA
GGAGGAGGAGGTGGTGGTGGCGGAGGTCCGGAGGAAGGTGGACGAGGACGCGCACGTGGT
GATGGGGCGCGACGTGTTCGTGCTGTGGTTGCGCGCCGGGTTCGACGCCGCGTTCGCCAT
GGGGATCGTGCTCGTTCTCGACCGGATCACCGGCGACGAGCTCAACGGCGACCTGAGCGA
GGACCTCGCCGTCGCCAGTTCGCCGGTGTAAAAGCTTTCGGTGATCGGATCAATGGGTTC
ATGCTTAGAGATGTGTAAAATATGTATCATCTTGCAAATTCTTTTTTGTATGTTTTCTTG
TCGAAGTTTGAATATTTTGCCTTGTGAATTGAGCTTG