Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0508800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25188258:25193047:1 gene:Os05g0508800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1flk (Fragment). (Os05t0508800-01)
Sequence	ATGAGGGAGTACGGGCCCGCGGCGGCGCCGCGGCTGCTGGTGTCCGACTCCGGCCGCGTC CATGAGATGGAGAGGTTCTCGCATTACGTCGCTAGGCAAATTGGGTTTGACCATGTGGAT GAATGCCCCCACCTATGTACGCTGGCCTATGATTATCTGAGGAAGAACAAGGGTTACGAA GAAAACATATTCGCGTTCTTCCAAAACAGCCAGGATCCCGAGACTCTGATTGTAAAGTTC ATCGAGGAACTCGACAAATGTATACTTGGCTACTTCTCATTCCATTGGAACTATGCAACC TATATAATTTCCCAGGTTTTGACTGTAGAAGGTGCTCCTAAAAGAAAGCTCAGGAACATG GTATTAGAGGCCACTAGGAAACAGAGATTTGAAAGGGTTACAAGAAACTTGAAGGTGACC AGACTATTCTCCACATTGGTGGAGGAGCTGAAGGCCATAGGACTATCTTCCCATGTTGAA GCACCACGGAGTGATGTGATGGTCCCAGCAGCACATTGTGATCGCAGCCCAGTTCTACTC TTGATGGGTGGTGGGATGGGAGCTGGCAAGAGCACCGTGCTTAAGGATATACTCAAGGAA GCATTCTGGTCCGGAGCAGCTGCAAATGCAGTAGTTGTAGAGGCAGATGCATTCAAGGAA ACTGATGTAATCTATCGAGCTATCAGCTCAAGAGGCCACCACAATGACATGCTGCAGACG GCAGAACTGGTACATCAGTCATCGATGGACGCAGCCTCGTCGCTCCTGGTGACTGCCCTC AACGAAGGGAGGGATGTGATCATGGACGGCACCATGTCGTGGGAGCCGTTTGTCCAGCAG ACGATCACCATGGCCAGGGCTGTGCACCGGCAACGGTACCGCATGGGTGTTGGCTACAAG GTCACGGAGGACGGGTCAATCACTGAGGAGTACTGGGAGCCAGTTGAGGACTCCAGTACA GATGAAGAAGGCGAGACGAGAAACAGGAAGCCATATCGCATCGAGCTCGTAGGTGTGGTC TGTGATGCCTATCTTGCGGTTGTCAGGGGAATCAGGAGAGCTGTGATCACCGGGAGAGCA GTGAGGGTGAAGTCCCAGCTGAAGTCCCACAAGCGGTTCGCCACCGCGTTCCACAGCTAC TGCAACCTCGTCGACAATGCGAGGCTCTACTGCACCAACTCCACGGGCGCCGCCAAGCTG ATAGGATGGAAGGACGGCGAGAGCAACCTTCTAGTGGACCCTGAAGAAATCGGCTGCTTG GAGAGGGTGAGCCACCTCAACGACGAGGCCGACTGCGTCCACGAGATCTATCCGGACGGC TCGGCGGCGGCGGCCTGGGAGGCCCTGGTCACGTCGCCGTCGAGGGCGCCGGCGCAGCGG GAGATCATGGCGGCGGTCCAGAGGAGCGAGGCGCGCTTCCGGACCACGTCCACGCCCTCG TAG

Peptide Sequence

PEP ID	Os05t0508800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25188258:25193047:1 gene:Os05g0508800 transcript:Os05t0508800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1flk (Fragment). (Os05t0508800-01)
Sequence	MREYGPAAAPRLLVSDSGRVHEMERFSHYVARQIGFDHVDECPHLCTLAYDYLRKNKGYE ENIFAFFQNSQDPETLIVKFIEELDKCILGYFSFHWNYATYIISQVLTVEGAPKRKLRNM VLEATRKQRFERVTRNLKVTRLFSTLVEELKAIGLSSHVEAPRSDVMVPAAHCDRSPVLL LMGGGMGAGKSTVLKDILKEAFWSGAAANAVVVEADAFKETDVIYRAISSRGHHNDMLQT AELVHQSSMDAASSLLVTALNEGRDVIMDGTMSWEPFVQQTITMARAVHRQRYRMGVGYK VTEDGSITEEYWEPVEDSSTDEEGETRNRKPYRIELVGVVCDAYLAVVRGIRRAVITGRA VRVKSQLKSHKRFATAFHSYCNLVDNARLYCTNSTGAAKLIGWKDGESNLLVDPEEIGCL ERVSHLNDEADCVHEIYPDGSAAAAWEALVTSPSRAPAQREIMAAVQRSEARFRTTSTPS

Transcript Sequence

Transcript ID	Os05t0508800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25188258:25193047:1 gene:Os05g0508800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H1flk (Fragment). (Os05t0508800-01)
Sequence	GGGTCTAGTAGTCTTCTCTTCTTCCACGCGCAGGCGCAGCCATCGTCGTCATCGCCATCG CCGCCGCGGCGCGCGCGCGCGCGCCCGTGACTGACTTCCGTAGGGGGGGACTGAGGCACG CCACCCCGCGCGCGCGCGCGCGCGCGTGCGGCCGCACAACCACGAACGCGCTCCGAAGTC TTCCTTCCGGGAGGGCACGTGTGGTTGGGGTATAAAGGGGGAGAGAGGCACGATGCCGCA CGGCGTCGCGCTCGTCGTCGTCGTCGTCGTCGCTCCTGGCCGGTAGCGGATGGGCGTCGT GGTGGGGTTGCAGCTTGCTCGCCTCGCCCTCGCCCTCGCCGTCGCCGTCGCCCCCGGGTT GCTCAGCTTCTCCGCCGCCGCCACCGCAGCCTGAAGCGCGCGGGCGTCGAAACGAGGATG AGGGAGTACGGGCCCGCGGCGGCGCCGCGGCTGCTGGTGTCCGACTCCGGCCGCGTCCAT GAGATGGAGAGGTTCTCGCATTACGTCGCTAGGCAAATTGGGTTTGACCATGTGGATGAA TGCCCCCACCTATGTACGCTGGCCTATGATTATCTGAGGAAGAACAAGGGTTACGAAGAA AACATATTCGCGTTCTTCCAAAACAGCCAGGATCCCGAGACTCTGATTGTAAAGTTCATC GAGGAACTCGACAAATGTATACTTGGCTACTTCTCATTCCATTGGAACTATGCAACCTAT ATAATTTCCCAGGTTTTGACTGTAGAAGGTGCTCCTAAAAGAAAGCTCAGGAACATGGTA TTAGAGGCCACTAGGAAACAGAGATTTGAAAGGGTTACAAGAAACTTGAAGGTGACCAGA CTATTCTCCACATTGGTGGAGGAGCTGAAGGCCATAGGACTATCTTCCCATGTTGAAGCA CCACGGAGTGATGTGATGGTCCCAGCAGCACATTGTGATCGCAGCCCAGTTCTACTCTTG ATGGGTGGTGGGATGGGAGCTGGCAAGAGCACCGTGCTTAAGGATATACTCAAGGAAGCA TTCTGGTCCGGAGCAGCTGCAAATGCAGTAGTTGTAGAGGCAGATGCATTCAAGGAAACT GATGTAATCTATCGAGCTATCAGCTCAAGAGGCCACCACAATGACATGCTGCAGACGGCA GAACTGGTACATCAGTCATCGATGGACGCAGCCTCGTCGCTCCTGGTGACTGCCCTCAAC GAAGGGAGGGATGTGATCATGGACGGCACCATGTCGTGGGAGCCGTTTGTCCAGCAGACG ATCACCATGGCCAGGGCTGTGCACCGGCAACGGTACCGCATGGGTGTTGGCTACAAGGTC ACGGAGGACGGGTCAATCACTGAGGAGTACTGGGAGCCAGTTGAGGACTCCAGTACAGAT GAAGAAGGCGAGACGAGAAACAGGAAGCCATATCGCATCGAGCTCGTAGGTGTGGTCTGT GATGCCTATCTTGCGGTTGTCAGGGGAATCAGGAGAGCTGTGATCACCGGGAGAGCAGTG AGGGTGAAGTCCCAGCTGAAGTCCCACAAGCGGTTCGCCACCGCGTTCCACAGCTACTGC AACCTCGTCGACAATGCGAGGCTCTACTGCACCAACTCCACGGGCGCCGCCAAGCTGATA GGATGGAAGGACGGCGAGAGCAACCTTCTAGTGGACCCTGAAGAAATCGGCTGCTTGGAG AGGGTGAGCCACCTCAACGACGAGGCCGACTGCGTCCACGAGATCTATCCGGACGGCTCG GCGGCGGCGGCCTGGGAGGCCCTGGTCACGTCGCCGTCGAGGGCGCCGGCGCAGCGGGAG ATCATGGCGGCGGTCCAGAGGAGCGAGGCGCGCTTCCGGACCACGTCCACGCCCTCGTAG CTGCAGCACACGATCACTCGTGTCAGGTTGGAATTTTCTTTTCTTTTGACACGATTTCAG GTAGGATTGGGGGTATTTGGGTGTTGGTTGTGTGTGGTGGCTGCCAAATGGCTCGTGGGA CACAGTTCGTGTTATGTACGTATCATACTGTACATTGTATCAACTGATCCTGACTCCGTT ACCACCCGGCATATTGTTTCGTTTTGCCGGGCGATCGAGCTGCATCGAATGGAGCTCGTC GGAGTCATCGGTCATGTACACATGTGTCTTGTACGATGTATTCCGGATCTAGACAAGAAA CAACACATACTTTTCATGGTC