Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0508400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25159955:25163398:1 gene:Os05g0508400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-binding lectin domain containing protein. (Os05t0508400-01)
Sequence	ATGAGTATCAAAAGCAGCGACGGGAAGAGCCCCATAGTGGTTGGCCCTTGGGGTGGCACA GGAGGATACCCTTGGGATGATGGTGTATACTCAACGGTACGCCAGGTCATCATCACCCAT GGTGCAGCTATTGACTCCATAAGGATTGAATATGATCTGAAAGGAAGTTCAGTCTGGTCA GAGACACATGGGAGCACCGATGGAGGTTCTGAAACAGATAAGGTGAAGCTAGATTTCCCT GACGAAATCCTTGTGTCTGTAAGTGGCTATTACGGGTCAGTCTGTGGAACTCCAGTTATC ATAAGATCATTGACATTTCAAAGCAATCGTTCCATATACGGGCCTTTCGGTACTGAAGAT GGGACACCTTTCTCACTCCCAGTAAGCAGTGGTAAAATTATTGGTTTTCATGGAAGGTCA GGGTCGTATCTCAACTCAATAGGCTTTTATCTGAAGCAAGTGAATGTTTCAGATCGATCA AATTCTCCAGTCTTGCCTCAGAGTAGAAGTATTACAAGTGCATATAACAAAAATGGTTAT AGCTTTCCTGAGGGTGCTTCAGGATATGACATGGTCCTTGCAGTGAGAGATAGGGGTGAC AGCTATGCTGTTTATACTAGCAATTACCCTAATCAGCAGTATACAAATCCATCCCCAGAT TACAATGATGGAATCCGCTGGAATAAGGTGCCACAAACTAGTCCATCACTGCAGATGGTA TCTTTTCCTAGTGGTTACGGAGATAGAGGAGGTGCAGCTCTGAGTAGCCACGAGACCTAT GGTCCTTGGGGTGGAAGTGGTGGCACCATGTTTGATGATGGCATGTACACCGGTGTGTGG CAGATCAATTTGACTCGTGCAGTGGGAATTACTTCTATAAAGGTACTTTATGATCGAAAT GGCCAAGCAGTGTGGGGAAACAAGCATGGATTCAGTGGAGCTGTTTCACCAGACAAGATA GTATTTGATTTTCCCTCGGAGGTCTTGACTCATATAACCGGCTACTATGGCACGACAATG ATCATGGGTCCAACAGTGGTCAGATCACTCACATTCCACACAAACAAGCGGAGATACGGA CCATATGGGGATGAGTGTGGCACGTATTTCTCCACCAGTTTTTCTGATGGGAGGATAGTA GGATTCCATGGTAGGGAGGGATGGTACATTGATGGCATCGGGGTCCATGTTCAGGAAGGT AACTTGGCTGCACCGCGAGTTAGTAGTAGATCAACGATTGAGATGAACCCCTCTTTGCGC TACGACATGCTTGCACAATCAAGGAGTGAAACATACAATGAGGTTCCTTATAGCATGGTG AAAGAACCAGTTCCAATGGGGCCAGGGCCATGGGGTGGCGAAGGAGGCCGGCCATGGGAT GATGGTGTCTACACTGGTGTGAAGCAAGTCTATGTGATGAGAGGCACCTTTATCGGCTCG ATACAGATCGAGTACGACAGGGGTGACCAATCCGTCTGGTCTGCAAGGCATGGAACCAGT GGCCACATAACCCATAGGATTAAACTGGACTACCCACACGAGGTCCTGACATGCGTATAC GGCTACTACAACACCAACAGGGAGGAAGGGCCCAGGGTTCTGAGGTCGATCACCTTCATC AGCAACCGAGGGAAGTACGGGCCATTCGGAGAGGAGTTCGGGGCATACTTCTCGTCGGCG AAGACGGAAGGGAAGGTTGTGGGCTTCCATGGCCGGAGCGGGCAACACCTGGACGCCATT GGGGTGCATATGCAGCACTGGATGGGAGACAGGAGGCCTGCTCCCAAGTACGTGCTATCA AAGTACCTCTTCTGA

Peptide Sequence

PEP ID	Os05t0508400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25159955:25163398:1 gene:Os05g0508400 transcript:Os05t0508400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-binding lectin domain containing protein. (Os05t0508400-01)
Sequence	MSIKSSDGKSPIVVGPWGGTGGYPWDDGVYSTVRQVIITHGAAIDSIRIEYDLKGSSVWS ETHGSTDGGSETDKVKLDFPDEILVSVSGYYGSVCGTPVIIRSLTFQSNRSIYGPFGTED GTPFSLPVSSGKIIGFHGRSGSYLNSIGFYLKQVNVSDRSNSPVLPQSRSITSAYNKNGY SFPEGASGYDMVLAVRDRGDSYAVYTSNYPNQQYTNPSPDYNDGIRWNKVPQTSPSLQMV SFPSGYGDRGGAALSSHETYGPWGGSGGTMFDDGMYTGVWQINLTRAVGITSIKVLYDRN GQAVWGNKHGFSGAVSPDKIVFDFPSEVLTHITGYYGTTMIMGPTVVRSLTFHTNKRRYG PYGDECGTYFSTSFSDGRIVGFHGREGWYIDGIGVHVQEGNLAAPRVSSRSTIEMNPSLR YDMLAQSRSETYNEVPYSMVKEPVPMGPGPWGGEGGRPWDDGVYTGVKQVYVMRGTFIGS IQIEYDRGDQSVWSARHGTSGHITHRIKLDYPHEVLTCVYGYYNTNREEGPRVLRSITFI SNRGKYGPFGEEFGAYFSSAKTEGKVVGFHGRSGQHLDAIGVHMQHWMGDRRPAPKYVLS KYLF

Transcript Sequence

Transcript ID	Os05t0508400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25159955:25163398:1 gene:Os05g0508400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mannose-binding lectin domain containing protein. (Os05t0508400-01)
Sequence	AATAAACCCATCCTGTATTAGCAGATTGGTAATAGCAGAAGGAGGTGGCCCAATCTTAAA TTCTTAATTCAAGTGTCTGGGCCTATTTGGGCAGCGAGATATGAGTATCAAAAGCAGCGA CGGGAAGAGCCCCATAGTGGTTGGCCCTTGGGGTGGCACAGGAGGATACCCTTGGGATGA TGGTGTATACTCAACGGTACGCCAGGTCATCATCACCCATGGTGCAGCTATTGACTCCAT AAGGATTGAATATGATCTGAAAGGAAGTTCAGTCTGGTCAGAGACACATGGGAGCACCGA TGGAGGTTCTGAAACAGATAAGGTGAAGCTAGATTTCCCTGACGAAATCCTTGTGTCTGT AAGTGGCTATTACGGGTCAGTCTGTGGAACTCCAGTTATCATAAGATCATTGACATTTCA AAGCAATCGTTCCATATACGGGCCTTTCGGTACTGAAGATGGGACACCTTTCTCACTCCC AGTAAGCAGTGGTAAAATTATTGGTTTTCATGGAAGGTCAGGGTCGTATCTCAACTCAAT AGGCTTTTATCTGAAGCAAGTGAATGTTTCAGATCGATCAAATTCTCCAGTCTTGCCTCA GAGTAGAAGTATTACAAGTGCATATAACAAAAATGGTTATAGCTTTCCTGAGGGTGCTTC AGGATATGACATGGTCCTTGCAGTGAGAGATAGGGGTGACAGCTATGCTGTTTATACTAG CAATTACCCTAATCAGCAGTATACAAATCCATCCCCAGATTACAATGATGGAATCCGCTG GAATAAGGTGCCACAAACTAGTCCATCACTGCAGATGGTATCTTTTCCTAGTGGTTACGG AGATAGAGGAGGTGCAGCTCTGAGTAGCCACGAGACCTATGGTCCTTGGGGTGGAAGTGG TGGCACCATGTTTGATGATGGCATGTACACCGGTGTGTGGCAGATCAATTTGACTCGTGC AGTGGGAATTACTTCTATAAAGGTACTTTATGATCGAAATGGCCAAGCAGTGTGGGGAAA CAAGCATGGATTCAGTGGAGCTGTTTCACCAGACAAGATAGTATTTGATTTTCCCTCGGA GGTCTTGACTCATATAACCGGCTACTATGGCACGACAATGATCATGGGTCCAACAGTGGT CAGATCACTCACATTCCACACAAACAAGCGGAGATACGGACCATATGGGGATGAGTGTGG CACGTATTTCTCCACCAGTTTTTCTGATGGGAGGATAGTAGGATTCCATGGTAGGGAGGG ATGGTACATTGATGGCATCGGGGTCCATGTTCAGGAAGGTAACTTGGCTGCACCGCGAGT TAGTAGTAGATCAACGATTGAGATGAACCCCTCTTTGCGCTACGACATGCTTGCACAATC AAGGAGTGAAACATACAATGAGGTTCCTTATAGCATGGTGAAAGAACCAGTTCCAATGGG GCCAGGGCCATGGGGTGGCGAAGGAGGCCGGCCATGGGATGATGGTGTCTACACTGGTGT GAAGCAAGTCTATGTGATGAGAGGCACCTTTATCGGCTCGATACAGATCGAGTACGACAG GGGTGACCAATCCGTCTGGTCTGCAAGGCATGGAACCAGTGGCCACATAACCCATAGGAT TAAACTGGACTACCCACACGAGGTCCTGACATGCGTATACGGCTACTACAACACCAACAG GGAGGAAGGGCCCAGGGTTCTGAGGTCGATCACCTTCATCAGCAACCGAGGGAAGTACGG GCCATTCGGAGAGGAGTTCGGGGCATACTTCTCGTCGGCGAAGACGGAAGGGAAGGTTGT GGGCTTCCATGGCCGGAGCGGGCAACACCTGGACGCCATTGGGGTGCATATGCAGCACTG GATGGGAGACAGGAGGCCTGCTCCCAAGTACGTGCTATCAAAGTACCTCTTCTGATTGAG CTATGGATGAAAACTTGAATTCCTTTGAAACAAAAAGTGAATACTTGAATTACATGTAGT TTAGCCAATAGTCATATAGATAACAGATGGGCTGGTTTCGATTTGAGCTTTGGAGGCTGT AACATTTTGGGATATGGAACAGTTTAAGCCTGCGGATGAGTCCGTTCCTTGTACTCAGGC AGGCAGGCATATACTTAATGCATGACGATTTATGAGTAAATTCAAATGAAATTC