Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0508300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:25153902:25157647:1 gene:Os05g0508300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Papain-like cysteine peptidase XBCP3. (Os05t0508300-01)
Sequence	ATGGCGTTCGTCTCCTGCCTCTCGCCGCTGATGCTGATGCTGATGACGCTGATGCTGTCC GCGGCGGCCGCCGGTAGCGGTGGTGGTGGCGTGGCGGAGTACGAGGCGCAGTTCGAGGCG TGGTGCGCGGAGCACGGGAGGTCGTACGCGACGCCTGGGGAGCGCGCGGCGCGGCTCGCG GCGTTCGCGGACAACGCGGCGTTCGTGGCGGCGCACAACGGCGCGCCCGCGTCGTACGCC CTGGCGCTCAACGCCTTCGCGGACCTCACGCACGACGAGTTCCGCGCCGCGCGCCTCGGC CGCCTCGCCGCCGCCGGCGGCCCTGGCCGGGACGGCGGCGCGCCGTACCTGGGCGTCGAC GGTGGCGTCGGGGCCGTGCCCGATGCGGTGGACTGGAGGCAGAGCGGCGCCGTCACCAAG GTCAAGGACCAAGGCAGCTGCGGTGCTTGTTGGAGCTTCTCAGCTACAGGTGCCATGGAG GGAATAAACAAGATCAAGACAGGTTCTCTGATCAGCCTTTCCGAACAGGAACTAATAGAC TGTGATAGATCCTACAATAGTGGTTGTGGTGGTGGGCTCATGGATTATGCTTATAAGTTT GTGGTTAAAAATGGTGGAATTGACACGGAAGCGGATTACCCATATCGTGAAACAGATGGA ACATGTAACAAGAACAAGCTCAAAAGGCGAGTGGTAACAATTGATGGCTACAAAGATGTG CCTGCCAACAATGAAGATATGTTACTTCAGGCTGTTGCTCAGCAACCTGTTAGTGTAGGA ATATGCGGTAGCGCTAGAGCATTTCAGTTGTACTCCAAGGGTATCTTCGATGGTCCATGT CCTACATCTCTTGATCATGCTATATTAATTGTGGGATATGGTTCTGAAGGTGGCAAGGAT TACTGGATTGTGAAAAATTCTTGGGGTGAAAGTTGGGGTATGAAAGGCTATATGTATATG CATCGAAACACTGGTAACTCCAATGGTGTCTGTGGCATAAACCAGATGCCGTCATTCCCT ACGAAATCAAGCCCGAATCCTCCTCCTTCACCAGGGCCAGGTCCAACCAAATGCAGCCTT CTTACCTATTGCCCTGAAGGATCCACCTGCTGCTGCTCCTGGCGTGTCCTGGGGCTATGC CTTTCCTGGAGTTGTTGTGAACTGGATAACGCAGTTTGCTGCAAGGATAATCGCTATTGC TGCCCTCATGACTACCCGGTTTGTGATACGGCCAGCCAACGATGCTTCAAGGCAAATAAT GGCAACTTCTCTGTCATGGAGGGAGGGAGTAGGAAACAACCTTTCTCCAAAGTTCCTTCT TTGGGTGGTTTGTTGGAACTGTTGGATCAGTGA

Peptide Sequence

PEP ID	Os05t0508300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:25153902:25157647:1 gene:Os05g0508300 transcript:Os05t0508300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Papain-like cysteine peptidase XBCP3. (Os05t0508300-01)
Sequence	MAFVSCLSPLMLMLMTLMLSAAAAGSGGGGVAEYEAQFEAWCAEHGRSYATPGERAARLA AFADNAAFVAAHNGAPASYALALNAFADLTHDEFRAARLGRLAAAGGPGRDGGAPYLGVD GGVGAVPDAVDWRQSGAVTKVKDQGSCGACWSFSATGAMEGINKIKTGSLISLSEQELID CDRSYNSGCGGGLMDYAYKFVVKNGGIDTEADYPYRETDGTCNKNKLKRRVVTIDGYKDV PANNEDMLLQAVAQQPVSVGICGSARAFQLYSKGIFDGPCPTSLDHAILIVGYGSEGGKD YWIVKNSWGESWGMKGYMYMHRNTGNSNGVCGINQMPSFPTKSSPNPPPSPGPGPTKCSL LTYCPEGSTCCCSWRVLGLCLSWSCCELDNAVCCKDNRYCCPHDYPVCDTASQRCFKANN GNFSVMEGGSRKQPFSKVPSLGGLLELLDQ

Transcript Sequence

Transcript ID	Os05t0508300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:25153902:25157647:1 gene:Os05g0508300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Papain-like cysteine peptidase XBCP3. (Os05t0508300-01)
Sequence	GTGTTGTGCGCACGTGTAGCACGCGCTGGACTTATCTGCTTTGCTCGTTTCATCCAACGA GCCGAGCTACCCCATCACCTGCCGAGCTGCTGAGCTACCCATCGTTCGCGACAAGTTCCA ATCAGATTTTCAGCTGGTCACTGTCTTGCTGCTGCTGATATCATCAGCACGAGATCTTTC GTCTTCTCCGTTCTTCTCCGATCTGCAAGGTTCCATCGGTTTCTGCTCCTCAAATTCCAC TACCTCTCTTCTTGATTGGGAGGAAGCCAAGAAGAAGTCAAGAACTGCCCAGTCCCCGGT CACCAGGTGGTGGTGGCGAGTTGCGGCGATGGCGTTCGTCTCCTGCCTCTCGCCGCTGAT GCTGATGCTGATGACGCTGATGCTGTCCGCGGCGGCCGCCGGTAGCGGTGGTGGTGGCGT GGCGGAGTACGAGGCGCAGTTCGAGGCGTGGTGCGCGGAGCACGGGAGGTCGTACGCGAC GCCTGGGGAGCGCGCGGCGCGGCTCGCGGCGTTCGCGGACAACGCGGCGTTCGTGGCGGC GCACAACGGCGCGCCCGCGTCGTACGCCCTGGCGCTCAACGCCTTCGCGGACCTCACGCA CGACGAGTTCCGCGCCGCGCGCCTCGGCCGCCTCGCCGCCGCCGGCGGCCCTGGCCGGGA CGGCGGCGCGCCGTACCTGGGCGTCGACGGTGGCGTCGGGGCCGTGCCCGATGCGGTGGA CTGGAGGCAGAGCGGCGCCGTCACCAAGGTCAAGGACCAAGGCAGCTGCGGTGCTTGTTG GAGCTTCTCAGCTACAGGTGCCATGGAGGGAATAAACAAGATCAAGACAGGTTCTCTGAT CAGCCTTTCCGAACAGGAACTAATAGACTGTGATAGATCCTACAATAGTGGTTGTGGTGG TGGGCTCATGGATTATGCTTATAAGTTTGTGGTTAAAAATGGTGGAATTGACACGGAAGC GGATTACCCATATCGTGAAACAGATGGAACATGTAACAAGAACAAGCTCAAAAGGCGAGT GGTAACAATTGATGGCTACAAAGATGTGCCTGCCAACAATGAAGATATGTTACTTCAGGC TGTTGCTCAGCAACCTGTTAGTGTAGGAATATGCGGTAGCGCTAGAGCATTTCAGTTGTA CTCCAAGGGTATCTTCGATGGTCCATGTCCTACATCTCTTGATCATGCTATATTAATTGT GGGATATGGTTCTGAAGGTGGCAAGGATTACTGGATTGTGAAAAATTCTTGGGGTGAAAG TTGGGGTATGAAAGGCTATATGTATATGCATCGAAACACTGGTAACTCCAATGGTGTCTG TGGCATAAACCAGATGCCGTCATTCCCTACGAAATCAAGCCCGAATCCTCCTCCTTCACC AGGGCCAGGTCCAACCAAATGCAGCCTTCTTACCTATTGCCCTGAAGGATCCACCTGCTG CTGCTCCTGGCGTGTCCTGGGGCTATGCCTTTCCTGGAGTTGTTGTGAACTGGATAACGC AGTTTGCTGCAAGGATAATCGCTATTGCTGCCCTCATGACTACCCGGTTTGTGATACGGC CAGCCAACGATGCTTCAAGGCAAATAATGGCAACTTCTCTGTCATGGAGGGAGGGAGTAG GAAACAACCTTTCTCCAAAGTTCCTTCTTTGGGTGGTTTGTTGGAACTGTTGGATCAGTG AGCCTATAATTCGAGCCAACTATCTTCGAATACACTGATGTATGGACAATGCTAGGCTCA GTCAGTAGTCAGTGGTTGGGTTGCTGCTTTCTTCAAGTTTCCTGCCGCCCTGATGCTCGT CTTGCACGGAGATATTCAGATTTACTGTGTATTTTGGTGAATGGTAAATCATAATTTGCC CTGTAATGTTGTTGCTGTACATGTCAGACTAGCCTGGATTATTTCACTCAATTTGTGCTA GTGAGAACCACTTGCTACGTATGGTAGATTGATAATAAAGAGATTGTGCTGAGTCCATGC ATCT