Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0502700-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:24735332:24736903:1 gene:Os05g0502700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os05t0502700-00)
Sequence

ATGGCCGTGGAGAACGGGGCGGCGCTGTTCGGCGAGGAGGAGCTGCGGGACGTGAGCGGG
GTGCGGGTGGGCGACAGGTTCGTGGAGGTGACGTGCGGCTGCACCAGCGCGCGCTACGGC
GACGCCGTCGGCCGCCTCCGCCTCTTCGCCTCCGGCGAGCTCCAGGTCTCCTGCGACTGC
ACCCCCGGCTGCGACCAAGATAAGCTGAGCCCGGCGGCGTTCGAGAAGCACTCCGGGAGG
GAGACGGCGGGGAGGTGGCAGAACACGGTGTGGGTGATGGTCAAGGGGGACAAGGTGGCG
CTCTCCAAGACCTGCCTGCTCAGGTACTACCACAAGAAGCTCAAGTCGTCGTCGGCCAAC
GGCGGCGGCCGCCGGCCGCCGTGCCACCGCGACGAGTTCGTCCGGTGCGCCGGCTGCGGC
AAGGAGAGGCGGTTCCGGCTCAGGACCAAGGAGGAGTGCCGCCTCTACCACGACGCCATG
GCGCGCCATGACTGGACCTGCAAGGACATGCCCCCCGCTGGCAGCTGCGAGGAGGAGGAG
GAGAGGGCGAGCAGGAAGGCGTCGAGGGGGTGCACGCGGGCGGCGACGTGCAAGGGGTGC
GTGAGGTGCGTCTGCTTCGGCTGCGAGACCTGCCGCTTCGCCGGCTGCGCCTGCCAGACC
TGCGTCGATTTCTACCGGATCAACTGCATGATCAACTCGTAG

Peptide Sequence

PEP ID

Os05t0502700-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:24735332:24736903:1 gene:Os05g0502700 transcript:Os05t0502700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os05t0502700-00)
Sequence

MAVENGAALFGEEELRDVSGVRVGDRFVEVTCGCTSARYGDAVGRLRLFASGELQVSCDC
TPGCDQDKLSPAAFEKHSGRETAGRWQNTVWVMVKGDKVALSKTCLLRYYHKKLKSSSAN
GGGRRPPCHRDEFVRCAGCGKERRFRLRTKEECRLYHDAMARHDWTCKDMPPAGSCEEEE
ERASRKASRGCTRAATCKGCVRCVCFGCETCRFAGCACQTCVDFYRINCMINS

Transcript Sequence

Transcript ID

Os05t0502700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:24735332:24736903:1 gene:Os05g0502700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os05t0502700-00)
Sequence

ATCTCATCTATACCAGTAAGGTGTGTTGCTTTTGCTTCTTCTGCCCTTGGTGTTCTTCTG
ATCTTCTCAGATCGATCAATCTATGAACTCTGATTCTCTGTGCCATCGTGCGACGTCAGG
TAGTTGTTGGTCGTTGGTTGGTTTGATTGGGGAGAGATCGATCGATTGATCGATCAGAAT
CGACGACGATGGCCGTGGAGAACGGGGCGGCGCTGTTCGGCGAGGAGGAGCTGCGGGACG
TGAGCGGGGTGCGGGTGGGCGACAGGTTCGTGGAGGTGACGTGCGGCTGCACCAGCGCGC
GCTACGGCGACGCCGTCGGCCGCCTCCGCCTCTTCGCCTCCGGCGAGCTCCAGGTCTCCT
GCGACTGCACCCCCGGCTGCGACCAAGATAAGCTGAGCCCGGCGGCGTTCGAGAAGCACT
CCGGGAGGGAGACGGCGGGGAGGTGGCAGAACACGGTGTGGGTGATGGTCAAGGGGGACA
AGGTGGCGCTCTCCAAGACCTGCCTGCTCAGGTACTACCACAAGAAGCTCAAGTCGTCGT
CGGCCAACGGCGGCGGCCGCCGGCCGCCGTGCCACCGCGACGAGTTCGTCCGGTGCGCCG
GCTGCGGCAAGGAGAGGCGGTTCCGGCTCAGGACCAAGGAGGAGTGCCGCCTCTACCACG
ACGCCATGGCGCGCCATGACTGGACCTGCAAGGACATGCCCCCCGCTGGCAGCTGCGAGG
AGGAGGAGGAGAGGGCGAGCAGGAAGGCGTCGAGGGGGTGCACGCGGGCGGCGACGTGCA
AGGGGTGCGTGAGGTGCGTCTGCTTCGGCTGCGAGACCTGCCGCTTCGCCGGCTGCGCCT
GCCAGACCTGCGTCGATTTCTACCGGATCAACTGCATGATCAACTCGTAG