Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0502500-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:24729478:24732816:-1 gene:Os05g0502500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0502500-01)
Sequence

ATGGCCTCGCTGCTGCCGCCTACTCATCTCCTCACTCCTCCCCCGCTCTGCTGCTGCTCG
TACGCTCTACTTCTCCCGAGAGCCAGGAGGGCGCCTCCAAGATTCTCGAATGGGGCCTTC
TCCGCGGCGGAATCGCTGGTCCGGGGTGAGTTCTTGGGGAAAGTCGGGACCTTGGCTCGG
AGAATGGAGGGAAGGCGGCGCCTTGCCGTGGCTAGTGCCGGGAGAGGCCCACTTTTTGGC
GGCGGCGGCGGCGGTGGCGGGCAGCGGGGCTCCGGCCGGGTGGTGGGGAACCTTGCCTTC
GCCGCCCTCTTGACGTTCCTCGCCACCACCGGCCAGCTCCGGTGGGTTCTGGACGCCATC
GTCTCCCTCTGGCTTCTCACAATACTGCTGCCTATTTTGGGTCTCGCTGCATTTTTCTTC
TTTGCAGGCCAAGACATACTTCAGAGCAATTGCCCCAACTGCGGAAAAAGCTTCCAGATA
CTGAAGTCATCTTTGAAGGATGGTCCACAACTGTGTCCATATTGTACTCAACCTTTCTCG
GTGCAGGGAAACAAATTTGTTAGAGAATCTGCTAGATTTTCATCTGGAAGGACCACCACA
GGTGCTCAAGCCTTCAGTGAGTCCTTCAAACGTGGTTCGGAGGGGAAGAAGACACCTTCT
GGAACTGTTGTAGACATCGAAGCTGAAGTGAAGGATGCCGAGTGA

Peptide Sequence

PEP ID

Os05t0502500-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:24729478:24732816:-1 gene:Os05g0502500 transcript:Os05t0502500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0502500-01)
Sequence

MASLLPPTHLLTPPPLCCCSYALLLPRARRAPPRFSNGAFSAAESLVRGEFLGKVGTLAR
RMEGRRRLAVASAGRGPLFGGGGGGGGQRGSGRVVGNLAFAALLTFLATTGQLRWVLDAI
VSLWLLTILLPILGLAAFFFFAGQDILQSNCPNCGKSFQILKSSLKDGPQLCPYCTQPFS
VQGNKFVRESARFSSGRTTTGAQAFSESFKRGSEGKKTPSGTVVDIEAEVKDAE

Transcript Sequence

Transcript ID

Os05t0502500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:24729478:24732816:-1 gene:Os05g0502500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0502500-01)
Sequence

AGAATCTTCTCCCTGCTGAACCTTCCCCTTCCATGGCCTCGCTGCTGCCGCCTACTCATC
TCCTCACTCCTCCCCCGCTCTGCTGCTGCTCGTACGCTCTACTTCTCCCGAGAGCCAGGA
GGGCGCCTCCAAGATTCTCGAATGGGGCCTTCTCCGCGGCGGAATCGCTGGTCCGGGGTG
AGTTCTTGGGGAAAGTCGGGACCTTGGCTCGGAGAATGGAGGGAAGGCGGCGCCTTGCCG
TGGCTAGTGCCGGGAGAGGCCCACTTTTTGGCGGCGGCGGCGGCGGTGGCGGGCAGCGGG
GCTCCGGCCGGGTGGTGGGGAACCTTGCCTTCGCCGCCCTCTTGACGTTCCTCGCCACCA
CCGGCCAGCTCCGGTGGGTTCTGGACGCCATCGTCTCCCTCTGGCTTCTCACAATACTGC
TGCCTATTTTGGGTCTCGCTGCATTTTTCTTCTTTGCAGGCCAAGACATACTTCAGAGCA
ATTGCCCCAACTGCGGAAAAAGCTTCCAGATACTGAAGTCATCTTTGAAGGATGGTCCAC
AACTGTGTCCATATTGTACTCAACCTTTCTCGGTGCAGGGAAACAAATTTGTTAGAGAAT
CTGCTAGATTTTCATCTGGAAGGACCACCACAGGTGCTCAAGCCTTCAGTGAGTCCTTCA
AACGTGGTTCGGAGGGGAAGAAGACACCTTCTGGAACTGTTGTAGACATCGAAGCTGAAG
TGAAGGATGCCGAGTGATTCTTCTGCAGGAATGTGCTAAGAATCTCTGCCTCGTTGACAT
CAGTTTTGCAGCTCTTCATGGCCAATTTTTCAGAGGGCTATTAAATCTGGTAGCAGTGTC
ATGGTTGTACCAACCGTTCGCTAGATTTGTTGATATGCTAGGTCCAGGATATCAAGACGA
ACTGACACTTGATTCCATAAGTGACGACATGTAGCGCCTTCTTCTCGTTGCAACTTGTAA
ATTGCAATTACCTCTGCTTGTGTAAAAGTAACAACAGAAAAGGTAGATGTGAATATTTAC
TTCTTTTTTTTTTTTGCTTTTGTATGTGGATGAGCAATCAAAGATCAGTTGAAGAAC