Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0500500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:24627221:24629101:1 gene:Os05g0500500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP22.3 description:Heat shock protein Hsp20 domain containing protein. (Os05t0500500-01)
Sequence	ATGCCGCCGCGGCGGGGGATCGAGGTCCGGCAGGCGGTCGGCGACGGAGCAGCGCCGAGG TGGCGCATGTCGCTGCTGGAGAACACGTTCAGCTCGTTCCTGCAGTCGATCGGCGGCGGC GTGGCGGCGGACGGGGCGGCGGCGAGGGCCGTGTTCGGGGAGGGGTCGCTGTTCAGCCCC TTCCTGTTCGGCAAGTTCTTCGACCCGGCCGACGCCTTCCCGCTGTGGGAGTTCGAGCCG GAGGTGCTGCTCGCCGCGCTCCGCCGCGGGGCCAGGACCACCGTCGACTGGGCCGAGACG GACTCCGAGTACTACCTCAGAGCTGACATACCAGGTGGGAGGAAATGCGACGTGGAGGTG AGCGGCGACGACGCCATGAGGGTGGTCGACGTCAGCGGGCTGTGGCGGGCGGCGCCGCCG CCGCCTCCGCCGGACGGCCGGGACTGGCGCGCCGGGCGGTGGTGGGAGCACGGCTTCGTC CGGCGCGTCGAGCTGCCGGAGGACGCGGACTGGAGGAAAGTGGAGGCCTTCTTCGACGAC GGCGAGGGGTTGCTCGAGATCAAGGTGCCCAAGTCCGGCGACGCCCACCAAGCGGCGGCC GCCACCGCCTGA

Peptide Sequence

PEP ID	Os05t0500500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:24627221:24629101:1 gene:Os05g0500500 transcript:Os05t0500500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP22.3 description:Heat shock protein Hsp20 domain containing protein. (Os05t0500500-01)
Sequence	MPPRRGIEVRQAVGDGAAPRWRMSLLENTFSSFLQSIGGGVAADGAAARAVFGEGSLFSP FLFGKFFDPADAFPLWEFEPEVLLAALRRGARTTVDWAETDSEYYLRADIPGGRKCDVEV SGDDAMRVVDVSGLWRAAPPPPPPDGRDWRAGRWWEHGFVRRVELPEDADWRKVEAFFDD GEGLLEIKVPKSGDAHQAAAATA

Transcript Sequence

Transcript ID	Os05t0500500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:24627221:24629101:1 gene:Os05g0500500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HSP22.3 description:Heat shock protein Hsp20 domain containing protein. (Os05t0500500-01)
Sequence	ACACACCTGCGCCTCATCTAGACAGGCAGTCGATCGATCAGTCAGTCGCCATCAATGCCG CCGCGGCGGGGGATCGAGGTCCGGCAGGCGGTCGGCGACGGAGCAGCGCCGAGGTGGCGC ATGTCGCTGCTGGAGAACACGTTCAGCTCGTTCCTGCAGTCGATCGGCGGCGGCGTGGCG GCGGACGGGGCGGCGGCGAGGGCCGTGTTCGGGGAGGGGTCGCTGTTCAGCCCCTTCCTG TTCGGCAAGTTCTTCGACCCGGCCGACGCCTTCCCGCTGTGGGAGTTCGAGCCGGAGGTG CTGCTCGCCGCGCTCCGCCGCGGGGCCAGGACCACCGTCGACTGGGCCGAGACGGACTCC GAGTACTACCTCAGAGCTGACATACCAGGTGGGAGGAAATGCGACGTGGAGGTGAGCGGC GACGACGCCATGAGGGTGGTCGACGTCAGCGGGCTGTGGCGGGCGGCGCCGCCGCCGCCT CCGCCGGACGGCCGGGACTGGCGCGCCGGGCGGTGGTGGGAGCACGGCTTCGTCCGGCGC GTCGAGCTGCCGGAGGACGCGGACTGGAGGAAAGTGGAGGCCTTCTTCGACGACGGCGAG GGGTTGCTCGAGATCAAGGTGCCCAAGTCCGGCGACGCCCACCAAGCGGCGGCCGCCACC GCCTGAGAATCCTAACCTCGCCGGCGTCGCCGCGCGATTGGAGAGAGCAAATTATTCTTC TTCTGAGTTCTGACAGTGACGGTGAAGATGGCACAAAACTTGATAAGAATTTCTCAAAGA TATGGAGGGACCAAAAAGTGAGCAAAGATCATCTCACACATGTTGCATATGCATTAACGT CCAATCCATGTGCCTGCAGATGATTTGTACTAGTACTAATGTGTTAGCTTACCGTTAAAA ATGGATCATTAATTAGCATCGTGCATATGCATCAGCATCACAGTCACAGCATCGCTGTCG AATTGGTCGACGATAAAATGGGTCATCGAGATCATAAATTCGATTC