Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0498300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:24522895:24534335:1 gene:Os05g0498300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MutS-homolog 5 description:DNA mismatch repair protein MutS, core domain containing protein. (Os05t0498300-01)
Sequence	ATGGACGAGGAAGAGGAGGAGGAGATGTCCGAGAGGGAGGTCGACTCCCAGGTTCATATG GCTTGTGTAATGCAAGGACGCAGAGTTGGAATAGCATACTATGATTCAAGTATGCACCAG CTTTTTGTATTGGAAATCTGGGAAGACATAACTGAAGATTTTCCTTTGATTGATCTTGTG AAATATCAATCCAAACCGAGCACAATATACACAAGTACTAAAACAGATGAGGCACTTTTG TTGGCGTTACAACGAAATGATTGTAATGATGAGGCCCCTGCTGTGAAGCTCATGAAAAGC TCAACCTTCAGCTATGAGCAAGCCTGGCACAGATTAATGTACTTGAAAGTCGCAGCTATG GACGAAGGGTTAAGTGTAAAAGAAAGGATCTGTTTTCTTAATTCCATGATGGATCTTGGA AGTGACGTTCAAGTTCGTGCTGCTGGAGGTCTTCTTGCTATATTAGACAACGAGAGGCTT CTTGATACCCTTGATCAGATGGAAGGTGGAGCATCCATTGCTATTGATTCTGTGGCACAG ATATCATTGGACAAGTTCCTGAAACTTGATGCAACAGCTCACGAGGCGCTACAGATTTTT CAAGTAGATAAACACCCCAGTTACATGGGAATTGGAAGGGCTAAAGAAGGGTTCTCAGTT TTTGGTATGCTCAATAAGTGCGTCACTCCTATGGGAAAACATCTCTTGAGGACATGGTTT TTACGTCCTATAATCGATATTGATGTCATAAATAATCGCCTCAATACAATATCATTCTTT CTTTGCTGTGAAGATGTAATGTCTGCACTGCGTGGGACTTTGAAGTCTGTCAGAGATATT CCCCACATGCTCAAGAAATTCAACTCTCCAAGTTCATTCTGTACAAGCAGTGACTGGCAT GCATTTCTGAAGTGCATTTGCTCTCTTCTGCATATAAACAAGATTTTTGAAGTAGGAATA TCAGAGCATTTGGCAATCAAATTACAACATATGAACATTGACTTGGTTGGAAAGGCCAAT TCTTCCATTACAGAAGAGCTGGATTATGTATCAGATCTGGTAGTTGGTGTGATTGATGTG CAACGGGGTAAAGAAAAAGGCTACGACACACTGGTGAAAGACGGATTATGTGAGGAGTTA GACGAACTGAGGATGGTCTATGAAGAATTGCCTGATTTTTTGGAGCAGGTGTCAGCCAAT GAAATTGCCTCCTTCCCTTTCTCATTTGAATGCAGAAAAGCTCCTCTAATCGTCTATGTA CACCAAATAGGATATTTAATGTGTTTTTTCGATGAGAAGATAAGTGATGCCTTGTTGATA GGACTTCCAGATTTTGAATTTGCGTTTTCTGAGGAAGGAGAGGAGAGAAGGTTCTACTAT CATACTCAAAAGACGAGAGAACTTGACAATCTTCTGGGCGATATTTACCATAAAATTCTT GACATGGAGAGAGCAATTATAAGGGATTTAGTGTGTCGTGTTTGCCAGTTTATACCTCAA CTGACGAAAGCAGTAAACTTTGCAGCAGAACTTGATTGCATATTATCGTTGGCAATTGTT GCTCGCCAAAACAATTATGTGAGGCCCATCTTAACTGAGGATTCCATACTTGAGATACAG AATGGCAGACATGCTTTGCAGGAAATGACTGTTGATACCTTCGTTCCAAATGACACTAAA ATCCGCAGTTCAGGACGAATCAACATAATAACTGGACCTAACTACTCAGGGAAAAGCATT TACATCAAGCAGGTGGCTTTGGTGGTTTTTCTTGCTCATATTGGAAGCTTTGTTCCTGCT GATTCTGCCATTGTTGGATTGACAGATAGGATTTTCTGTGCAATGGGCAGCAAATCCATG ACAAGTGAACAGTCAACTTTTATGATTGATTTACATCAAGTTGGAACAATGCTCAGGCAC GCAACATCGAGATCCCTATGCTTATTGGATGAATTCGGAAAAGGCACTCTAACAGAAGAT GGTATTGGTCTGCTTGGAGGAACTATCAGCCATTTTACAGACTACGATTGTCCTCCAAAG GTCCTTTTGTCAACACATCTGACACAGATTTTCACAGAAAGCTACCTGCCGCAGTCTGAA CATATCAAATGTTATACCATGAGTGTTCTGAATCCTGATGAACAAACAGACAACGAAGAT GTCATATTCCTTTATCGACTTGTACCTGGGCAAGCGCTCTTGAGCTTTGGACTACACTGT GCACAGCTTGCTGGTGTTCCGAGTGAAGTTGTTCAGAGAGCTGTTACTGTTTTGGGGGAC ATCCACTCAAAGAGACCTATAAGGCGCATGGTCTGGGAGAAGTTAGCAGCAAAGGACCAA CAATACCAGGATGCAGTGACTAAACTGTTGGCCTTCGACCCACACAAAGGTGATCTGGTC AACTTCTTCCAGGAAGTTTTTCCGTCCTAG

Peptide Sequence

PEP ID	Os05t0498300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:24522895:24534335:1 gene:Os05g0498300 transcript:Os05t0498300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MutS-homolog 5 description:DNA mismatch repair protein MutS, core domain containing protein. (Os05t0498300-01)
Sequence	MDEEEEEEMSEREVDSQVHMACVMQGRRVGIAYYDSSMHQLFVLEIWEDITEDFPLIDLV KYQSKPSTIYTSTKTDEALLLALQRNDCNDEAPAVKLMKSSTFSYEQAWHRLMYLKVAAM DEGLSVKERICFLNSMMDLGSDVQVRAAGGLLAILDNERLLDTLDQMEGGASIAIDSVAQ ISLDKFLKLDATAHEALQIFQVDKHPSYMGIGRAKEGFSVFGMLNKCVTPMGKHLLRTWF LRPIIDIDVINNRLNTISFFLCCEDVMSALRGTLKSVRDIPHMLKKFNSPSSFCTSSDWH AFLKCICSLLHINKIFEVGISEHLAIKLQHMNIDLVGKANSSITEELDYVSDLVVGVIDV QRGKEKGYDTLVKDGLCEELDELRMVYEELPDFLEQVSANEIASFPFSFECRKAPLIVYV HQIGYLMCFFDEKISDALLIGLPDFEFAFSEEGEERRFYYHTQKTRELDNLLGDIYHKIL DMERAIIRDLVCRVCQFIPQLTKAVNFAAELDCILSLAIVARQNNYVRPILTEDSILEIQ NGRHALQEMTVDTFVPNDTKIRSSGRINIITGPNYSGKSIYIKQVALVVFLAHIGSFVPA DSAIVGLTDRIFCAMGSKSMTSEQSTFMIDLHQVGTMLRHATSRSLCLLDEFGKGTLTED GIGLLGGTISHFTDYDCPPKVLLSTHLTQIFTESYLPQSEHIKCYTMSVLNPDEQTDNED VIFLYRLVPGQALLSFGLHCAQLAGVPSEVVQRAVTVLGDIHSKRPIRRMVWEKLAAKDQ QYQDAVTKLLAFDPHKGDLVNFFQEVFPS

Transcript Sequence

Transcript ID	Os05t0498300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:24522895:24534335:1 gene:Os05g0498300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MutS-homolog 5 description:DNA mismatch repair protein MutS, core domain containing protein. (Os05t0498300-01)
Sequence	AACAACTTCCTTCCCGTACAAGCCAGTGCCCGAGCCACGCTCCCGCCGCACTTCGCCCCT CGCCGCCTAGCTTGCTCCATCCTCCGCGCCCGCGCAGCTGCGCTCGCCGTCGCCGTCGCT GCCTAGCTTCCTCCAGCCTCCGCATCTGCGCTCTATTTGTACCGCATTCTCGGAGGAGGA GCAGGAGGCGAGGAGCCGCCGAGTAGAGGAGAGGGGGAGGCGAAGTCGGTGCTCTCGCCG GGGGTTGACGGTGGAACTCCGGGCGAGCGATCGAGCCGGCGAAATGGACGAGGAAGAGGA GGAGGAGATGTCCGAGAGGGAGGTCGACTCCCAGGTTCATATGGCTTGTGTAATGCAAGG ACGCAGAGTTGGAATAGCATACTATGATTCAAGTATGCACCAGCTTTTTGTATTGGAAAT CTGGGAAGACATAACTGAAGATTTTCCTTTGATTGATCTTGTGAAATATCAATCCAAACC GAGCACAATATACACAAGTACTAAAACAGATGAGGCACTTTTGTTGGCGTTACAACGAAA TGATTGTAATGATGAGGCCCCTGCTGTGAAGCTCATGAAAAGCTCAACCTTCAGCTATGA GCAAGCCTGGCACAGATTAATGTACTTGAAAGTCGCAGCTATGGACGAAGGGTTAAGTGT AAAAGAAAGGATCTGTTTTCTTAATTCCATGATGGATCTTGGAAGTGACGTTCAAGTTCG TGCTGCTGGAGGTCTTCTTGCTATATTAGACAACGAGAGGCTTCTTGATACCCTTGATCA GATGGAAGGTGGAGCATCCATTGCTATTGATTCTGTGGCACAGATATCATTGGACAAGTT CCTGAAACTTGATGCAACAGCTCACGAGGCGCTACAGATTTTTCAAGTAGATAAACACCC CAGTTACATGGGAATTGGAAGGGCTAAAGAAGGGTTCTCAGTTTTTGGTATGCTCAATAA GTGCGTCACTCCTATGGGAAAACATCTCTTGAGGACATGGTTTTTACGTCCTATAATCGA TATTGATGTCATAAATAATCGCCTCAATACAATATCATTCTTTCTTTGCTGTGAAGATGT AATGTCTGCACTGCGTGGGACTTTGAAGTCTGTCAGAGATATTCCCCACATGCTCAAGAA ATTCAACTCTCCAAGTTCATTCTGTACAAGCAGTGACTGGCATGCATTTCTGAAGTGCAT TTGCTCTCTTCTGCATATAAACAAGATTTTTGAAGTAGGAATATCAGAGCATTTGGCAAT CAAATTACAACATATGAACATTGACTTGGTTGGAAAGGCCAATTCTTCCATTACAGAAGA GCTGGATTATGTATCAGATCTGGTAGTTGGTGTGATTGATGTGCAACGGGGTAAAGAAAA AGGCTACGACACACTGGTGAAAGACGGATTATGTGAGGAGTTAGACGAACTGAGGATGGT CTATGAAGAATTGCCTGATTTTTTGGAGCAGGTGTCAGCCAATGAAATTGCCTCCTTCCC TTTCTCATTTGAATGCAGAAAAGCTCCTCTAATCGTCTATGTACACCAAATAGGATATTT AATGTGTTTTTTCGATGAGAAGATAAGTGATGCCTTGTTGATAGGACTTCCAGATTTTGA ATTTGCGTTTTCTGAGGAAGGAGAGGAGAGAAGGTTCTACTATCATACTCAAAAGACGAG AGAACTTGACAATCTTCTGGGCGATATTTACCATAAAATTCTTGACATGGAGAGAGCAAT TATAAGGGATTTAGTGTGTCGTGTTTGCCAGTTTATACCTCAACTGACGAAAGCAGTAAA CTTTGCAGCAGAACTTGATTGCATATTATCGTTGGCAATTGTTGCTCGCCAAAACAATTA TGTGAGGCCCATCTTAACTGAGGATTCCATACTTGAGATACAGAATGGCAGACATGCTTT GCAGGAAATGACTGTTGATACCTTCGTTCCAAATGACACTAAAATCCGCAGTTCAGGACG AATCAACATAATAACTGGACCTAACTACTCAGGGAAAAGCATTTACATCAAGCAGGTGGC TTTGGTGGTTTTTCTTGCTCATATTGGAAGCTTTGTTCCTGCTGATTCTGCCATTGTTGG ATTGACAGATAGGATTTTCTGTGCAATGGGCAGCAAATCCATGACAAGTGAACAGTCAAC TTTTATGATTGATTTACATCAAGTTGGAACAATGCTCAGGCACGCAACATCGAGATCCCT ATGCTTATTGGATGAATTCGGAAAAGGCACTCTAACAGAAGATGGTATTGGTCTGCTTGG AGGAACTATCAGCCATTTTACAGACTACGATTGTCCTCCAAAGGTCCTTTTGTCAACACA TCTGACACAGATTTTCACAGAAAGCTACCTGCCGCAGTCTGAACATATCAAATGTTATAC CATGAGTGTTCTGAATCCTGATGAACAAACAGACAACGAAGATGTCATATTCCTTTATCG ACTTGTACCTGGGCAAGCGCTCTTGAGCTTTGGACTACACTGTGCACAGCTTGCTGGTGT TCCGAGTGAAGTTGTTCAGAGAGCTGTTACTGTTTTGGGGGACATCCACTCAAAGAGACC TATAAGGCGCATGGTCTGGGAGAAGTTAGCAGCAAAGGACCAACAATACCAGGATGCAGT GACTAAACTGTTGGCCTTCGACCCACACAAAGGTGATCTGGTCAACTTCTTCCAGGAAGT TTTTCCGTCCTAGCTGTAGACCAGGCTGCATGGAACCTACAAAACAAATGATGTAAAAGA GTTGCTTAAAACATGGAATTGGCAGATCATACGCGACCTGCTCCAGGAACCTACAAAACA AATGCTGAACCTCACTTGATCAGTGGCGTTGGGACATTGTGTACATATTTGCTTGGCAAT GAGAAATCAAATTTTGCGTCTTTTCTGTTTGGATGAGACTTGTCATCGCCATTAAACGAA TATTCTGTAGTTTCGT