Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0497600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:24473136:24478871:1 gene:Os05g0497600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arsenic-induced RING E3 ligase 1, ARSENIC-INDUCED RING E3 LIGASE 1 description:Arsenic-induced RING E3 ligase, Abiotic stress response (Os05t0497600-01)
Sequence	ATGCCCGCGCAGAAGCGGCCGGCACCGGAGGCGGCGTCGGCTCCAGCGGGGGGAGACGGG CACGTGGAAGGAGGAGGTGCTGGTGGTGGTGGTGGCGCGGACGAGGACGCCCACCGCGGC GGGGAGCGCTCCCCGAAGGTGATGAACGGTGGCGGGCCGGAGAAGGAGAAGGAGCGGCGG GACGCTGATTCTGATGCGGAGGAAGAGGAGGAGGAGGCCGGCGGCGGCGGTGGTGGTGGA GGGGCCGACGAAGACCGCGACAGCCCGTCTTCGGAGAGCGACGGCGACATGGACGAGTTT ATACTAGTGAAATTAATGGATATACGGAAAGAAGTGCAGTGCCCTATATGCTTAGGCATT ATCCGGAAGACAAGGACAGTTATGGAGTGTTTGCACCGGTTTTGTAGGGATTGCATAGAT AAATCCATGCGACTAGGAAATAATGAATGCCCAGCATGCCGCACCCATTGTGCAAGTAGA CGTTCTTTGAGGGATGATCCTAATTATGATGCTTTAATTTTGGCTTTGTATCCAGATATT GACAAGTACGAGGAAGAGGAACTTGCTTTCAGCGAAGAGGAGAGGACTCGCAACAAAAAG ATCCAAGCATCCATCGCTGAAACATTTCGAAGACAATCAGAAGCACTCGTGAAGAAGCGT TCCGTTGCAAAAGCAACAGGTTCAACTATTACGAGAAGGACCAGGGGTAATATGCGCGCA AAAAGGAGGGGACGAACTAGTTCCCCTGATATTGTTGCAACTGACAATGAGGATGAGGAT AGAGATGAAAATGGCAATGAGGGCAGCAAAGAGTCGTCTTCTGTTGATGACCGTTCCCCA GATGTAAGGCAGAAAAGAGTTCGGAGGTGGCCCGTGCCACGATCATCCCCTGCTAAGAGC ATTGGGGGTATTGATAGTAGCTTTGAGGATATTGATGACTTAGGAAGTGGCAGAGATATC ATGAGTACTTCTCCACTACGCGGAGAGATGCTTGCCTGGGGAAAAAATGGCACCCGCAGT CAAACCCGGCATGGCAATTCTGGTGGTTCCAGTGGAAGGATGGCAAAGGGTGGTCGTGTT ACCAAGTTGGTTGAATACCTACGTAATACCGATGAATTCGATAATAAGTTCAACTTATAT CTTGTTCTACTTCCACTTAATGGACAAAGCATGCCTAAATTGGAGAAGCCCTATCTCAGT TGCCAACCGACATTCTCTGTTCGCCATCTTTGCCAGTTTGTTGCTCTCCAATTGTCTCGC CATGCGAAAGAAGTGGAGATATTCATCAGGAAGAACCCCAACAATGGATGCTTTGCATCC ATAGATACTAGTGCAGATGAGATAAAACTGAATCATGACGCCTTAGAAAGATTGGAGGAA GAGAAATCTCTTTCAGAGCTGTACCCTTCACTTGCCTCTGGCCATGGGGATCTGGAATTA TTATATTCCCTGAAAGCAGAAGTGTAG

Peptide Sequence

PEP ID	Os05t0497600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:24473136:24478871:1 gene:Os05g0497600 transcript:Os05t0497600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arsenic-induced RING E3 ligase 1, ARSENIC-INDUCED RING E3 LIGASE 1 description:Arsenic-induced RING E3 ligase, Abiotic stress response (Os05t0497600-01)
Sequence	MPAQKRPAPEAASAPAGGDGHVEGGGAGGGGGADEDAHRGGERSPKVMNGGGPEKEKERR DADSDAEEEEEEAGGGGGGGGADEDRDSPSSESDGDMDEFILVKLMDIRKEVQCPICLGI IRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALILALYPDI DKYEEEELAFSEEERTRNKKIQASIAETFRRQSEALVKKRSVAKATGSTITRRTRGNMRA KRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDRSPDVRQKRVRRWPVPRSSPAKS IGGIDSSFEDIDDLGSGRDIMSTSPLRGEMLAWGKNGTRSQTRHGNSGGSSGRMAKGGRV TKLVEYLRNTDEFDNKFNLYLVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSR HAKEVEIFIRKNPNNGCFASIDTSADEIKLNHDALERLEEEKSLSELYPSLASGHGDLEL LYSLKAEV

Transcript Sequence

Transcript ID	Os05t0497600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:24473136:24478871:1 gene:Os05g0497600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arsenic-induced RING E3 ligase 1, ARSENIC-INDUCED RING E3 LIGASE 1 description:Arsenic-induced RING E3 ligase, Abiotic stress response (Os05t0497600-01)
Sequence	GCTTTTCTTTTCCTCTCGCTCTCCGCCTCCTCCTCCTCTTATTGCCCCCGACTGCGAGTC GAGTCGCTTCCACCCACCTCACCTCCCTTCCCCCTCCTCGTGCTTGCTCCACGACGTCGC GGAGAAGGGGGCGCGCGCGCGGCGAGCGGGGAGGCGGGGAGGAGGCCGGAATGCCCGCGC AGAAGCGGCCGGCACCGGAGGCGGCGTCGGCTCCAGCGGGGGGAGACGGGCACGTGGAAG GAGGAGGTGCTGGTGGTGGTGGTGGCGCGGACGAGGACGCCCACCGCGGCGGGGAGCGCT CCCCGAAGGTGATGAACGGTGGCGGGCCGGAGAAGGAGAAGGAGCGGCGGGACGCTGATT CTGATGCGGAGGAAGAGGAGGAGGAGGCCGGCGGCGGCGGTGGTGGTGGAGGGGCCGACG AAGACCGCGACAGCCCGTCTTCGGAGAGCGACGGCGACATGGACGAGTTTATACTAGTGA AATTAATGGATATACGGAAAGAAGTGCAGTGCCCTATATGCTTAGGCATTATCCGGAAGA CAAGGACAGTTATGGAGTGTTTGCACCGGTTTTGTAGGGATTGCATAGATAAATCCATGC GACTAGGAAATAATGAATGCCCAGCATGCCGCACCCATTGTGCAAGTAGACGTTCTTTGA GGGATGATCCTAATTATGATGCTTTAATTTTGGCTTTGTATCCAGATATTGACAAGTACG AGGAAGAGGAACTTGCTTTCAGCGAAGAGGAGAGGACTCGCAACAAAAAGATCCAAGCAT CCATCGCTGAAACATTTCGAAGACAATCAGAAGCACTCGTGAAGAAGCGTTCCGTTGCAA AAGCAACAGGTTCAACTATTACGAGAAGGACCAGGGGTAATATGCGCGCAAAAAGGAGGG GACGAACTAGTTCCCCTGATATTGTTGCAACTGACAATGAGGATGAGGATAGAGATGAAA ATGGCAATGAGGGCAGCAAAGAGTCGTCTTCTGTTGATGACCGTTCCCCAGATGTAAGGC AGAAAAGAGTTCGGAGGTGGCCCGTGCCACGATCATCCCCTGCTAAGAGCATTGGGGGTA TTGATAGTAGCTTTGAGGATATTGATGACTTAGGAAGTGGCAGAGATATCATGAGTACTT CTCCACTACGCGGAGAGATGCTTGCCTGGGGAAAAAATGGCACCCGCAGTCAAACCCGGC ATGGCAATTCTGGTGGTTCCAGTGGAAGGATGGCAAAGGGTGGTCGTGTTACCAAGTTGG TTGAATACCTACGTAATACCGATGAATTCGATAATAAGTTCAACTTATATCTTGTTCTAC TTCCACTTAATGGACAAAGCATGCCTAAATTGGAGAAGCCCTATCTCAGTTGCCAACCGA CATTCTCTGTTCGCCATCTTTGCCAGTTTGTTGCTCTCCAATTGTCTCGCCATGCGAAAG AAGTGGAGATATTCATCAGGAAGAACCCCAACAATGGATGCTTTGCATCCATAGATACTA GTGCAGATGAGATAAAACTGAATCATGACGCCTTAGAAAGATTGGAGGAAGAGAAATCTC TTTCAGAGCTGTACCCTTCACTTGCCTCTGGCCATGGGGATCTGGAATTATTATATTCCC TGAAAGCAGAAGTGTAGATCAAATTAATGGCACAAGTTCTCCTTCAGTATCAATCTGATC AAATAGCGGGGAATATGATGGCATGCAGGGATCATCCGATGAAAGCCTGTACAAAGTTAT CCAGTATAGAAAAAGAAAAAAGAGAATCAGCAAACTTAGCTCTTCCTTAGTTGTGACTCG TTAAATTTGCTCTTGGTCTTCTGATATAGTACATGGTTCATTCATTTAAATTGGAGGAAT TGAAATGCATGGGTGGATGGAATTAAGTAGCAGTCGTAAAAGAAGGCCAAACATATAGTC TGGTGACTGCTCGTTGTGATATTGGTGTTGCCTGTCCAACTTGAACTGATTTTTAAATGG AGATATCAACTGATTTAACTTGGTAGCTCGATTCCCAGATGGTGGAATCGCAATTGCTCC CATTTCAGTTTGTTTTCACGCT