Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0495600-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:24347149:24354016:1 gene:Os05g0495600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 7 description:Similar to autoinhibited calcium ATPase. (Os05t0495600-00)
Sequence	CCAGCAAACAAAGCAGGGCGGGAAGCAGGAGGAGAGGGAGAGAGGAAGCGGCGGCCATGG AGGGCGGGAGAAGCTGGAGCATCGAGAGCTACCTCAACGAGTACTTCGACATCCCCGCCA AGAACCCTCCCGGCGAGGCGCGCCGCCGATGGCGCCGCGCCGTCGGCCTCATCGTCCGCA ACCGCCGCCGCCGCTTCGGCAGGTTCTCCGACGTCGACGCCATCGACGAAGCCCAGCGCC GCAAGATCCTGGTTCGTACGCAGCCCCCTCTCCCCCTCCCCCGGCGGGATCGCCATTCCC CCCCCCATCCCCGCCGCCGCGGTTGCCCCGGCGGCCGGCGAGCGTGAAGGATTCTGTATC AGCCCAGATGAACTAGCAGCAATTGCTAACATGCGTGAAGATTATACAATGCTCAGGATG CATGGTGGAATCAATGGAATATCTAGAAAAATCAAAGCATCATTGGAAGATGGTGCCAAG GAAACAGATATAGCAACCAGACAGATGCTGTATGGAGCTAACAGGCACGCTGAGAAGCCC CCTAGAAGCTTCTGGATGTTTGTGTGGGATGCATTGCATGACTTGACACTGATTATTCTA GTGGTATGTGCTCTGGTTTCTATAGTGGTCGGCCTTGCCACCAAGGGATGGCCGATGGGT ATTTATGATGGTTTTGGCATAATACTCAGCATTTTGTTGGTGGTACTAGTTACTGCAACC AGTGATTACCAACAAGCTCGGAAGTTTATGGAACTGGACCGTGAGAAGCAAAAAATATAT ATCCGTGTAACTAGAGATAAGAAAACAAAGGAGGTTTTAGTTCATGACTTGGTTGTCGGA GACATCTTGCATCTTTCTATAGGCGATGTGGTTCCTGCAGATGGTCTGTTTATATCTGGT GACTGCCTAATGATAGATGAATCAAGTTTGTCTGGTGAGAGTGAGCCAGTTAATATTTCT GAAGAGAGGCCTTTTCTTCATGCTGGGAATAAAGTAGTAGATGGGGCAGCTAAGATGCTT GTTACTGCCGTTGGTACGCGTACTGAGTGGGGCAAAATCATGGGTACTCTGAATGGAGAT GGTGTGGATGAAACTCCTTTGCAAGTTAAGCTTAATGGTGTGGCTACAATAATTGGCCAG ATTGGATTGGTGTTTGCTGTGCTAACATTTTTGGTACTTCTAGCGAGGTTCTTGGCTGAC AAGGGAATGCATGTTGGTTTGTTAAATTGGTCTGCAAATGATGCATTGACAATAGTCAAC TACTTCGCTATTGCAGTCACAATCATTGTTGTCGCAGTCCCTGAGGGTCTACCATTGGCT GTGACTCTTAGTCTGGCATTTGCTATGAAGAAGTTGATGCATGACAAAGCACTAGTTAGG CATCTCGCCGCATGTGAAACCATGGGTTCAGCAAGTTGCATTTGCACTGATAAGACAGGG ACTTTGACCACGAACCACATGATTGTTGATAAGGTTTGGATTGGTGATGTCAAGTTTGTT GGGGACAAAAAAAATTCTGAGCTAAAAAGCACGATTTCAGAAAGAGTTATGGCGATCCTT ATACAAGGCATATTTGTGAATACTGCGTCTGAAGTGGTGAAGGGAGACGATGGAAAAAAT ACCATCTTAGGCTTGGCTACTGAAACGGCATTATTGGAGTTTGGCTTGAGCTTGGAAGAA CATTTATATGATGACTACAATAAGTTGACTAGAATAAAAGTAGATCCTTTTAATTCAGTT AAGAAAAAGATGTCTGTGACAATACAATTACCTAATGGAGGCATCAGGACCTTCTGCAAA GGTGCGTCAGAAATTATTCTGGAACAGTGCAATACCATCCACAATACTGATGGAAATATA GTACCGCTGTCAGAAATGCAGAAGCATAATGTATTAAATATAATCAATTCGTTTGCTTCT GAGGCATTGAGAACACTTTGCATCGCATTTAAGGATATGGATGAATTTCCCAATGATCAA CCTATATCAGATGATGGTTACACACTAATAGCAGTTTTTGGTATAAAGGATCCAGTCCGT CCTGGTGTCAAGGATGCAGTAAGGACCTGCATGGCTGCTGGTATTAGAGTAAGAATGGTG ACGGGAGACAACATCAACACTGCTAAAGCTATTGCCAAGGAATGTGGAATATTAACGGAG GATGGAATAGCAATAGAAGGACAACAGCTTAACAATAAGAGCTCAGATGAACTGAAGGAA CTCCTACCAAAAATTCAGGTAATAGCTCGCTCCTTGCCTATGGACAAATACAAATTGGTG ACAAGCCTGAAAAGTATGTATCAAGAGGTTGTTGCGGTGACTGGTGATGGAACCAATGAT GCCCCAGCACTGCACGAGTCAGATATTGGACTAGCAATGGGTATCACTGGAACTGAGGTT GCAAAAGAGAGCGCTGATGTTATAATAATGGATGACAATTTCGAAACCATTGTAAATGTT GCTAGATGGGGCCGTGCAGTTTACTTAAACATCCAGAAGTTTGTGCAGTTCCAGCTTACA GTTAATATTGTGGCTCTGATTGTGAATTTTGTCTCAGCGTGCATCATAGGGAGTGCACCA CTTACTGCTGTTCAGTTGCTATGGGTGAACATGATTATGGATACGTTGGGAGCCTTGGCC TTAGCCACAGAACCACCAAATGACGAAATGATGAAGAGGCCCCCTGTTAGGCGAGGAGAT AATTTTATCACTCGGATTATGTGGAGAAATATTCTTGGCCAAGGTTTGTATCAGCTCCTT GTGCTGGCTACTCTAATGGTTATTGGAAAGAAACTCCTTAGTATTGAAGGTCCTCAATCT GATAAAACCATCAATACTCTCATATTCAACTCTTTCGTCTTTTGCCAGGTTTTCAATGAA ATAAATTGTAGGGAGATGGAAAAGATCAATGTCCTCCAAGGTATCTTCAGAAACTGGATC TTTGTTGGTATATTGACAGCTACTGTCATATTCCAAGTGATCATAGTAGAATTTCTTGGC ACTTTTGCAAACACTGTACCATTGAGCGGGGAGCTGTGGCTGCTCAGCGTCGTCATTGGC TCAATTAGCATGATCATCTCTGTTATCCTCAAGTGCATTCCAGTTGAATTTAATAAGACA AATACTAAACCCCATGGTTATGAGTTGATTCCTGAAGGCCCAGAGATTCTATAG

Peptide Sequence

PEP ID	Os05t0495600-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:24347149:24354016:1 gene:Os05g0495600 transcript:Os05t0495600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 7 description:Similar to autoinhibited calcium ATPase. (Os05t0495600-00)
Sequence	PANKAGREAGGEGERKRRPWRAGEAGASRATSTSTSTSPPRTLPARRAADGAAPSASSSA TAAAASAGSPTSTPSTKPSAARSWFVRSPLSPSPGGIAIPPPIPAAAVAPAAGEREGFCI SPDELAAIANMREDYTMLRMHGGINGISRKIKASLEDGAKETDIATRQMLYGANRHAEKP PRSFWMFVWDALHDLTLIILVVCALVSIVVGLATKGWPMGIYDGFGIILSILLVVLVTAT SDYQQARKFMELDREKQKIYIRVTRDKKTKEVLVHDLVVGDILHLSIGDVVPADGLFISG DCLMIDESSLSGESEPVNISEERPFLHAGNKVVDGAAKMLVTAVGTRTEWGKIMGTLNGD GVDETPLQVKLNGVATIIGQIGLVFAVLTFLVLLARFLADKGMHVGLLNWSANDALTIVN YFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMHDKALVRHLAACETMGSASCICTDKTG TLTTNHMIVDKVWIGDVKFVGDKKNSELKSTISERVMAILIQGIFVNTASEVVKGDDGKN TILGLATETALLEFGLSLEEHLYDDYNKLTRIKVDPFNSVKKKMSVTIQLPNGGIRTFCK GASEIILEQCNTIHNTDGNIVPLSEMQKHNVLNIINSFASEALRTLCIAFKDMDEFPNDQ PISDDGYTLIAVFGIKDPVRPGVKDAVRTCMAAGIRVRMVTGDNINTAKAIAKECGILTE DGIAIEGQQLNNKSSDELKELLPKIQVIARSLPMDKYKLVTSLKSMYQEVVAVTGDGTND APALHESDIGLAMGITGTEVAKESADVIIMDDNFETIVNVARWGRAVYLNIQKFVQFQLT VNIVALIVNFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGD NFITRIMWRNILGQGLYQLLVLATLMVIGKKLLSIEGPQSDKTINTLIFNSFVFCQVFNE INCREMEKINVLQGIFRNWIFVGILTATVIFQVIIVEFLGTFANTVPLSGELWLLSVVIG SISMIISVILKCIPVEFNKTNTKPHGYELIPEGPEIL

Transcript Sequence

Transcript ID	Os05t0495600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:24347149:24354016:1 gene:Os05g0495600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 7 description:Similar to autoinhibited calcium ATPase. (Os05t0495600-00)
Sequence	CCAGCAAACAAAGCAGGGCGGGAAGCAGGAGGAGAGGGAGAGAGGAAGCGGCGGCCATGG AGGGCGGGAGAAGCTGGAGCATCGAGAGCTACCTCAACGAGTACTTCGACATCCCCGCCA AGAACCCTCCCGGCGAGGCGCGCCGCCGATGGCGCCGCGCCGTCGGCCTCATCGTCCGCA ACCGCCGCCGCCGCTTCGGCAGGTTCTCCGACGTCGACGCCATCGACGAAGCCCAGCGCC GCAAGATCCTGGTTCGTACGCAGCCCCCTCTCCCCCTCCCCCGGCGGGATCGCCATTCCC CCCCCCATCCCCGCCGCCGCGGTTGCCCCGGCGGCCGGCGAGCGTGAAGGATTCTGTATC AGCCCAGATGAACTAGCAGCAATTGCTAACATGCGTGAAGATTATACAATGCTCAGGATG CATGGTGGAATCAATGGAATATCTAGAAAAATCAAAGCATCATTGGAAGATGGTGCCAAG GAAACAGATATAGCAACCAGACAGATGCTGTATGGAGCTAACAGGCACGCTGAGAAGCCC CCTAGAAGCTTCTGGATGTTTGTGTGGGATGCATTGCATGACTTGACACTGATTATTCTA GTGGTATGTGCTCTGGTTTCTATAGTGGTCGGCCTTGCCACCAAGGGATGGCCGATGGGT ATTTATGATGGTTTTGGCATAATACTCAGCATTTTGTTGGTGGTACTAGTTACTGCAACC AGTGATTACCAACAAGCTCGGAAGTTTATGGAACTGGACCGTGAGAAGCAAAAAATATAT ATCCGTGTAACTAGAGATAAGAAAACAAAGGAGGTTTTAGTTCATGACTTGGTTGTCGGA GACATCTTGCATCTTTCTATAGGCGATGTGGTTCCTGCAGATGGTCTGTTTATATCTGGT GACTGCCTAATGATAGATGAATCAAGTTTGTCTGGTGAGAGTGAGCCAGTTAATATTTCT GAAGAGAGGCCTTTTCTTCATGCTGGGAATAAAGTAGTAGATGGGGCAGCTAAGATGCTT GTTACTGCCGTTGGTACGCGTACTGAGTGGGGCAAAATCATGGGTACTCTGAATGGAGAT GGTGTGGATGAAACTCCTTTGCAAGTTAAGCTTAATGGTGTGGCTACAATAATTGGCCAG ATTGGATTGGTGTTTGCTGTGCTAACATTTTTGGTACTTCTAGCGAGGTTCTTGGCTGAC AAGGGAATGCATGTTGGTTTGTTAAATTGGTCTGCAAATGATGCATTGACAATAGTCAAC TACTTCGCTATTGCAGTCACAATCATTGTTGTCGCAGTCCCTGAGGGTCTACCATTGGCT GTGACTCTTAGTCTGGCATTTGCTATGAAGAAGTTGATGCATGACAAAGCACTAGTTAGG CATCTCGCCGCATGTGAAACCATGGGTTCAGCAAGTTGCATTTGCACTGATAAGACAGGG ACTTTGACCACGAACCACATGATTGTTGATAAGGTTTGGATTGGTGATGTCAAGTTTGTT GGGGACAAAAAAAATTCTGAGCTAAAAAGCACGATTTCAGAAAGAGTTATGGCGATCCTT ATACAAGGCATATTTGTGAATACTGCGTCTGAAGTGGTGAAGGGAGACGATGGAAAAAAT ACCATCTTAGGCTTGGCTACTGAAACGGCATTATTGGAGTTTGGCTTGAGCTTGGAAGAA CATTTATATGATGACTACAATAAGTTGACTAGAATAAAAGTAGATCCTTTTAATTCAGTT AAGAAAAAGATGTCTGTGACAATACAATTACCTAATGGAGGCATCAGGACCTTCTGCAAA GGTGCGTCAGAAATTATTCTGGAACAGTGCAATACCATCCACAATACTGATGGAAATATA GTACCGCTGTCAGAAATGCAGAAGCATAATGTATTAAATATAATCAATTCGTTTGCTTCT GAGGCATTGAGAACACTTTGCATCGCATTTAAGGATATGGATGAATTTCCCAATGATCAA CCTATATCAGATGATGGTTACACACTAATAGCAGTTTTTGGTATAAAGGATCCAGTCCGT CCTGGTGTCAAGGATGCAGTAAGGACCTGCATGGCTGCTGGTATTAGAGTAAGAATGGTG ACGGGAGACAACATCAACACTGCTAAAGCTATTGCCAAGGAATGTGGAATATTAACGGAG GATGGAATAGCAATAGAAGGACAACAGCTTAACAATAAGAGCTCAGATGAACTGAAGGAA CTCCTACCAAAAATTCAGGTAATAGCTCGCTCCTTGCCTATGGACAAATACAAATTGGTG ACAAGCCTGAAAAGTATGTATCAAGAGGTTGTTGCGGTGACTGGTGATGGAACCAATGAT GCCCCAGCACTGCACGAGTCAGATATTGGACTAGCAATGGGTATCACTGGAACTGAGGTT GCAAAAGAGAGCGCTGATGTTATAATAATGGATGACAATTTCGAAACCATTGTAAATGTT GCTAGATGGGGCCGTGCAGTTTACTTAAACATCCAGAAGTTTGTGCAGTTCCAGCTTACA GTTAATATTGTGGCTCTGATTGTGAATTTTGTCTCAGCGTGCATCATAGGGAGTGCACCA CTTACTGCTGTTCAGTTGCTATGGGTGAACATGATTATGGATACGTTGGGAGCCTTGGCC TTAGCCACAGAACCACCAAATGACGAAATGATGAAGAGGCCCCCTGTTAGGCGAGGAGAT AATTTTATCACTCGGATTATGTGGAGAAATATTCTTGGCCAAGGTTTGTATCAGCTCCTT GTGCTGGCTACTCTAATGGTTATTGGAAAGAAACTCCTTAGTATTGAAGGTCCTCAATCT GATAAAACCATCAATACTCTCATATTCAACTCTTTCGTCTTTTGCCAGGTTTTCAATGAA ATAAATTGTAGGGAGATGGAAAAGATCAATGTCCTCCAAGGTATCTTCAGAAACTGGATC TTTGTTGGTATATTGACAGCTACTGTCATATTCCAAGTGATCATAGTAGAATTTCTTGGC ACTTTTGCAAACACTGTACCATTGAGCGGGGAGCTGTGGCTGCTCAGCGTCGTCATTGGC TCAATTAGCATGATCATCTCTGTTATCCTCAAGTGCATTCCAGTTGAATTTAATAAGACA AATACTAAACCCCATGGTTATGAGTTGATTCCTGAAGGCCCAGAGATTCTATAG