Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0492200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:24184504:24189203:1 gene:Os05g0492200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YR1, YR7, YR11, YR20, YR22, YR24 description:NB-ARC domain containing protein. (Os05t0492200-01)
Sequence	ATGGTGATCGGAGAAGCTGTTCTGTCTGCCTTCATGCAAGCACTTTTTGATAAAGTGATT GCTGCTGCTATAGGTGAGCTGAAATTCCCCCAAGACATAGCTGAGGAGCTGCAGAAGTTA TCCAGCAGTCTGTCAACGATTCAAGCGCATGTCGAAGATGCTGAGGCTCGGCAACTTAAG GATAGGGCGGCACGAAGCTGGCTTGCCAAGCTTAAGGATGTCGCATATGAGATGGATGAC TTGCTCGATGAATATGCAGCTGAGACCCTCCAATCTGAACTAGAAGGCTCGTCCCGCAGT CGCCATCTGAGCAAGGTTAGAAGCAGTTTCTGTTGCCTTTGGTTGAACAACTGTTTTTCC AACCACAAGATTGTGCAACAAATAAGGAAGATCGAGGAGAAGATCGACAGGCTTGTGAAA GAAAGACAGCTTATTGGGCCCGATATGAGCAGTACCATGGACAGAGAAGAGATCAAAGAG AGGCCGAAGACCAGTTCACTAATTGATGGCTCAAGTGTGTTTGGGAGAGAAGAAGATAAA GAGAACATTGTGAAGATGCTGTTGACTCCGAACAACTCCAACCATGCCAACGTTTCTGTT CTTCCCATAGTGGGTATGGGGGGACTAGGGAAGACAACTCTAACACAGCTTGTCTACAAT GATCCAAGAGTAAAGGAGTACTTCCAGTTACGGGTGTGGCTGTGCGTTTCTGAAAATTTT GACGAAATGAAGCTTACCAAGGAAACCATTGAATCAGTTGCCAGTGGGTTCTCATCGGTC ACGACCAACATGAACTTGCTTCAAGAAGATCTCTCAAAAAAGCTGGAAGGTAAAAGATTT CTTCTAGTACTTGATGATGTTTGGAATGAGGACCCTGAAAAATGGGACAGATATCGTTGT GCTCTTGTTAGTGGAAGCAATGGAAGCAGAATTGTAGTAACTACACGGAACAAAAATGTT GGGAAACTAATGGGTGGAATGACTCCTTACTTTCTAAAGCAGTTATCTGAAAATGATTGC TGGAACTTGTTCAGGAGCTATGCATTTGCTGATGGTGACTCCAGTTTGCACCCACATTTA GAAATTATAGGCAAGGAAATTGTGAAGAAGTTGAAAGGCCTCCCACTTGCTGCAAAAGCA ATAGGTAGTTTGTTATGTACCAAGGATACTGAGGATGATTGGAAGAATGTATTAAGGAGT GAAATATGGGAACTACCATCAGATAAGAACAATATATTACCAGCACTGAGGCTGAGTTAC AATCATTTGCCTGCCATATTGAAGCGATGTTTTGCGTTTTGCTCAGTCTTCCATAAAGAT TATGTGTTCGAAAAAGAAACCTTGGTGCAAATATGGATGGCCCTTGGGTTCATTCAGTCT CCAGGAAGGAGAACAATTGAGGAACTTGGGAGCAGCTATTTTGATGAACTATTAAGCAGA TCCTTCTTCCAACATCACAAAGGAGGATATGTGATGCATGACGCCATGCATGACCTTGCA CAGTCGGTCTCAATGGATGAATGCTTAAGATTGGATGACCCTCCAAACAGCAGCAGCACT TCAAGAAGTTCCAGGCACCTGTCATTCTCTTGTCACAATAGAAGCCGGACTTCATTTGAA GACTTTCTTGGATTTAAGAGAGCACGCACACTTCTACTATTAAATGGATATAAATCAAGG ACAAGCCCTATTCCCAGTGATCTGTTCCTCATGTTAAGGTACCTCCATGTGCTTGAATTG AACCGGCGAGACATTACTGAGTTGCCAGACTCCATCGGGAACCTAAAAATGCTCCGTTAT TTGAATCTTTCAGGCACTGGTATAACTGTGTTGCCTTCATCAATTGGTAGGCTCTTCAAC TTGCAAACACTTAAGTTGAAAAACTGCCATGTATTAGAGTGCATCCCAGAAAGCATAACC AATCTTGTAAATCTTCGATGGCTAGAAGCACGAATAGATTTGATCACTGGCATTGCAAGA ATAGGGAACTTGACTTGCCTCCAACAGTTGGAGGAATTTGTTGTTCATAACGACAAAGGA TACAAGATCAGTGAATTGAAAACAATGATGAGTATCGGAGGTCGTATATGTATTAAGAAT CTTGAGGCTGTAGATAGTGCAGAAGAGGCAGGTGAAGCTTTACTAAGCAAGAAGACACGC ATCAGGATTCTAGACCTGGTATGGTCCGACAGGAGGCACCTAACTTCAGAAGAAGCAAAT CAAGAGAAAGAGATACTTGAACAGCTCCAACCACATTGCGAACTCAGGGAGCTGACGGTC AAGGGATTTGTGGGATTCTACTTTCCAAAGTGGTTAAGCAGACTTTGTCACTTGCAAACT ATTCACCTGTCTGACTGTACAAATTGTTCGATTCTACCAGCACTAGGGGAGCTACCTCTA CTCAAGTTCTTAGACATTGGGGGTTTTCCTGCCATTATTCAAATCAACCAAGAGTTTTCA GGCAGCGATGAGGTTAAGGGGTTTCCGTCACTGAAGGAACTTGTAATTGAAGACATGGTT AATCTCCAAAGATGGGTTTCTTTTCAAGATGGTGAGTTGCTTCCATCCCTCACAGAACTT GAAGTGATTGACTGCCCACAAGTAACAGAATTCCCGCCCTTACCACCGACATTAGTAAAG CTCATAATTTCAGAAACAGGGTTCACTATTCTTCCAGAAGTCCATGTACCAAACTGTCAA TTTTCATCATCATTAGCATGTTTACAGATTCATCAGTGCCCAAATCTCATATCCTTACAG AATGGATTGCTTAGCCAGAAATTATTCTCTCTCCAGCAATTAACCATTACTAAGTGCGCA GAGCTAACTCATCTGCCAGCTGAAGGATTCAGATCCCTGACTGCTCTTAAAAGTCTCCAC ATTTATGATTGCGAGATGCTGGCACCATCAGAGCAGCATAGCTTGCTACCCCCCATGCTT GAAGACCTGCGCATCACTTCATGCTCCAATCTAATCAATCCTCTTCTTCAAGAGCTAAAT GAACTATCCTCACTGATACATCTTACCATCACTAATTGTGCCAACTTTTATTCTTTTCCA GTAAAGCTTCCAGTCACTCTGCAAACATTGGAGATCTTCCAGTGCAGTGATATGAGCTAC TTGCCAGCTGACCTAAATGAAGTTTCCTGTCTAACAGTTATGACCATCTTGAAATGCCCT CTTATAACATGCTTGTCAGAACATGGCCTTCCAGAATCACTAAAAGAATTATACATCAAA GAATGCCCTTTAATAACAGAGAGGTGCCAGGAAATTGGTGGAGAAGATTGGCCTAAAATT GCTCATGTACCAGTAATAGAGATAGATGATGATTACTTCATACCCAACAGGAGCATAAGA AGAAGGTTGTCCTGA

Peptide Sequence

PEP ID	Os05t0492200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:24184504:24189203:1 gene:Os05g0492200 transcript:Os05t0492200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YR1, YR7, YR11, YR20, YR22, YR24 description:NB-ARC domain containing protein. (Os05t0492200-01)
Sequence	MVIGEAVLSAFMQALFDKVIAAAIGELKFPQDIAEELQKLSSSLSTIQAHVEDAEARQLK DRAARSWLAKLKDVAYEMDDLLDEYAAETLQSELEGSSRSRHLSKVRSSFCCLWLNNCFS NHKIVQQIRKIEEKIDRLVKERQLIGPDMSSTMDREEIKERPKTSSLIDGSSVFGREEDK ENIVKMLLTPNNSNHANVSVLPIVGMGGLGKTTLTQLVYNDPRVKEYFQLRVWLCVSENF DEMKLTKETIESVASGFSSVTTNMNLLQEDLSKKLEGKRFLLVLDDVWNEDPEKWDRYRC ALVSGSNGSRIVVTTRNKNVGKLMGGMTPYFLKQLSENDCWNLFRSYAFADGDSSLHPHL EIIGKEIVKKLKGLPLAAKAIGSLLCTKDTEDDWKNVLRSEIWELPSDKNNILPALRLSY NHLPAILKRCFAFCSVFHKDYVFEKETLVQIWMALGFIQSPGRRTIEELGSSYFDELLSR SFFQHHKGGYVMHDAMHDLAQSVSMDECLRLDDPPNSSSTSRSSRHLSFSCHNRSRTSFE DFLGFKRARTLLLLNGYKSRTSPIPSDLFLMLRYLHVLELNRRDITELPDSIGNLKMLRY LNLSGTGITVLPSSIGRLFNLQTLKLKNCHVLECIPESITNLVNLRWLEARIDLITGIAR IGNLTCLQQLEEFVVHNDKGYKISELKTMMSIGGRICIKNLEAVDSAEEAGEALLSKKTR IRILDLVWSDRRHLTSEEANQEKEILEQLQPHCELRELTVKGFVGFYFPKWLSRLCHLQT IHLSDCTNCSILPALGELPLLKFLDIGGFPAIIQINQEFSGSDEVKGFPSLKELVIEDMV NLQRWVSFQDGELLPSLTELEVIDCPQVTEFPPLPPTLVKLIISETGFTILPEVHVPNCQ FSSSLACLQIHQCPNLISLQNGLLSQKLFSLQQLTITKCAELTHLPAEGFRSLTALKSLH IYDCEMLAPSEQHSLLPPMLEDLRITSCSNLINPLLQELNELSSLIHLTITNCANFYSFP VKLPVTLQTLEIFQCSDMSYLPADLNEVSCLTVMTILKCPLITCLSEHGLPESLKELYIK ECPLITERCQEIGGEDWPKIAHVPVIEIDDDYFIPNRSIRRRLS

Transcript Sequence

Transcript ID	Os05t0492200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:24184504:24189203:1 gene:Os05g0492200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YR1, YR7, YR11, YR20, YR22, YR24 description:NB-ARC domain containing protein. (Os05t0492200-01)
Sequence	CCGTTCCAATTAGCATACCCAACCGAAGAACATGGTGATCGGAGAAGCTGTTCTGTCTGC CTTCATGCAAGCACTTTTTGATAAAGTGATTGCTGCTGCTATAGGTGAGCTGAAATTCCC CCAAGACATAGCTGAGGAGCTGCAGAAGTTATCCAGCAGTCTGTCAACGATTCAAGCGCA TGTCGAAGATGCTGAGGCTCGGCAACTTAAGGATAGGGCGGCACGAAGCTGGCTTGCCAA GCTTAAGGATGTCGCATATGAGATGGATGACTTGCTCGATGAATATGCAGCTGAGACCCT CCAATCTGAACTAGAAGGCTCGTCCCGCAGTCGCCATCTGAGCAAGGTTAGAAGCAGTTT CTGTTGCCTTTGGTTGAACAACTGTTTTTCCAACCACAAGATTGTGCAACAAATAAGGAA GATCGAGGAGAAGATCGACAGGCTTGTGAAAGAAAGACAGCTTATTGGGCCCGATATGAG CAGTACCATGGACAGAGAAGAGATCAAAGAGAGGCCGAAGACCAGTTCACTAATTGATGG CTCAAGTGTGTTTGGGAGAGAAGAAGATAAAGAGAACATTGTGAAGATGCTGTTGACTCC GAACAACTCCAACCATGCCAACGTTTCTGTTCTTCCCATAGTGGGTATGGGGGGACTAGG GAAGACAACTCTAACACAGCTTGTCTACAATGATCCAAGAGTAAAGGAGTACTTCCAGTT ACGGGTGTGGCTGTGCGTTTCTGAAAATTTTGACGAAATGAAGCTTACCAAGGAAACCAT TGAATCAGTTGCCAGTGGGTTCTCATCGGTCACGACCAACATGAACTTGCTTCAAGAAGA TCTCTCAAAAAAGCTGGAAGGTAAAAGATTTCTTCTAGTACTTGATGATGTTTGGAATGA GGACCCTGAAAAATGGGACAGATATCGTTGTGCTCTTGTTAGTGGAAGCAATGGAAGCAG AATTGTAGTAACTACACGGAACAAAAATGTTGGGAAACTAATGGGTGGAATGACTCCTTA CTTTCTAAAGCAGTTATCTGAAAATGATTGCTGGAACTTGTTCAGGAGCTATGCATTTGC TGATGGTGACTCCAGTTTGCACCCACATTTAGAAATTATAGGCAAGGAAATTGTGAAGAA GTTGAAAGGCCTCCCACTTGCTGCAAAAGCAATAGGTAGTTTGTTATGTACCAAGGATAC TGAGGATGATTGGAAGAATGTATTAAGGAGTGAAATATGGGAACTACCATCAGATAAGAA CAATATATTACCAGCACTGAGGCTGAGTTACAATCATTTGCCTGCCATATTGAAGCGATG TTTTGCGTTTTGCTCAGTCTTCCATAAAGATTATGTGTTCGAAAAAGAAACCTTGGTGCA AATATGGATGGCCCTTGGGTTCATTCAGTCTCCAGGAAGGAGAACAATTGAGGAACTTGG GAGCAGCTATTTTGATGAACTATTAAGCAGATCCTTCTTCCAACATCACAAAGGAGGATA TGTGATGCATGACGCCATGCATGACCTTGCACAGTCGGTCTCAATGGATGAATGCTTAAG ATTGGATGACCCTCCAAACAGCAGCAGCACTTCAAGAAGTTCCAGGCACCTGTCATTCTC TTGTCACAATAGAAGCCGGACTTCATTTGAAGACTTTCTTGGATTTAAGAGAGCACGCAC ACTTCTACTATTAAATGGATATAAATCAAGGACAAGCCCTATTCCCAGTGATCTGTTCCT CATGTTAAGGTACCTCCATGTGCTTGAATTGAACCGGCGAGACATTACTGAGTTGCCAGA CTCCATCGGGAACCTAAAAATGCTCCGTTATTTGAATCTTTCAGGCACTGGTATAACTGT GTTGCCTTCATCAATTGGTAGGCTCTTCAACTTGCAAACACTTAAGTTGAAAAACTGCCA TGTATTAGAGTGCATCCCAGAAAGCATAACCAATCTTGTAAATCTTCGATGGCTAGAAGC ACGAATAGATTTGATCACTGGCATTGCAAGAATAGGGAACTTGACTTGCCTCCAACAGTT GGAGGAATTTGTTGTTCATAACGACAAAGGATACAAGATCAGTGAATTGAAAACAATGAT GAGTATCGGAGGTCGTATATGTATTAAGAATCTTGAGGCTGTAGATAGTGCAGAAGAGGC AGGTGAAGCTTTACTAAGCAAGAAGACACGCATCAGGATTCTAGACCTGGTATGGTCCGA CAGGAGGCACCTAACTTCAGAAGAAGCAAATCAAGAGAAAGAGATACTTGAACAGCTCCA ACCACATTGCGAACTCAGGGAGCTGACGGTCAAGGGATTTGTGGGATTCTACTTTCCAAA GTGGTTAAGCAGACTTTGTCACTTGCAAACTATTCACCTGTCTGACTGTACAAATTGTTC GATTCTACCAGCACTAGGGGAGCTACCTCTACTCAAGTTCTTAGACATTGGGGGTTTTCC TGCCATTATTCAAATCAACCAAGAGTTTTCAGGCAGCGATGAGGTTAAGGGGTTTCCGTC ACTGAAGGAACTTGTAATTGAAGACATGGTTAATCTCCAAAGATGGGTTTCTTTTCAAGA TGGTGAGTTGCTTCCATCCCTCACAGAACTTGAAGTGATTGACTGCCCACAAGTAACAGA ATTCCCGCCCTTACCACCGACATTAGTAAAGCTCATAATTTCAGAAACAGGGTTCACTAT TCTTCCAGAAGTCCATGTACCAAACTGTCAATTTTCATCATCATTAGCATGTTTACAGAT TCATCAGTGCCCAAATCTCATATCCTTACAGAATGGATTGCTTAGCCAGAAATTATTCTC TCTCCAGCAATTAACCATTACTAAGTGCGCAGAGCTAACTCATCTGCCAGCTGAAGGATT CAGATCCCTGACTGCTCTTAAAAGTCTCCACATTTATGATTGCGAGATGCTGGCACCATC AGAGCAGCATAGCTTGCTACCCCCCATGCTTGAAGACCTGCGCATCACTTCATGCTCCAA TCTAATCAATCCTCTTCTTCAAGAGCTAAATGAACTATCCTCACTGATACATCTTACCAT CACTAATTGTGCCAACTTTTATTCTTTTCCAGTAAAGCTTCCAGTCACTCTGCAAACATT GGAGATCTTCCAGTGCAGTGATATGAGCTACTTGCCAGCTGACCTAAATGAAGTTTCCTG TCTAACAGTTATGACCATCTTGAAATGCCCTCTTATAACATGCTTGTCAGAACATGGCCT TCCAGAATCACTAAAAGAATTATACATCAAAGAATGCCCTTTAATAACAGAGAGGTGCCA GGAAATTGGTGGAGAAGATTGGCCTAAAATTGCTCATGTACCAGTAATAGAGATAGATGA TGATTACTTCATACCCAACAGGAGCATAAGAAGAAGGTTGTCCTGAATGCAACAGCGATA TAGCTGAAATGATCACATATGAACTCATGATGTTGGTGGATGCTGATACTTCAAGAACAT TATGCATTTATGCATTCAACCTGCCATCACAAAGCACTGTGAAGAAAAAAAATCAGGTAC TTTAGCGGAAGAGTATGGTCTTAACTAATCAGTTCCTTGCGTTTCTCAAACATTGGGAAG CTTCCATTATGTCATAAATTTATAAACATCATTGTCCTAAGCGCATGTTTCAGATCCAGC TTATTCTATTGTGGCATTGTTTGTACTCATCTAGTTAAATGTGTGACTGTAACTTTCAAG AGTT