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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0492000-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:24180216:24182268:1 gene:Os05g0492000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 43 description:Similar to BZIP transcription factor. (Os05t0492000-00)
Sequence

ATGGTTTATGCAAGCCCTGGGACAGATGCATCAACAGATCCAGACATTGACAAGAATATC
CGGATGTTTGAACAAGGGGATCCTCCTACTCCCATAGCTTATTGTCCTAGAGACAAATCA
AAAGGCAAACTAGGTCAAAAGACACTACGTCGTCTTGCCCAAAATCGCGAAGCGGCTAGG
AAAAGCCGTTTAAGGAAGAAGGCATATGTCCAACAGCTTGAGGATAGCAGGATGAAACTT
ACTCAATTGGAGCAGGAGCTTCAACGTGCTCGTCAACAGGGCATTATCATTTCAACATCG
GGAGACCAACAACGTTCAACGAGTGAAAATGAAGCTCTGGCTTTTAACATGGAGTACATG
CGCTGGCTGGAGGAGCATAACAAGCAGATAAATGAGCTGAGGTCTGCAGTCCACACTCAT
GCCGGTGACGATGATCTTCAGAACATTGTTAGTAGCGTCATGGCGCACCATGAAGAAATC
TTCAGGATCAAGGGTTTAGCAGCAAAGGCTGATGCTCTCCATGTGTTATCAGCAACCTGG
AGGACCCCTCTTGAGAGGTGTTTTCTTTGGTTAGGTGGATTCCGACCATCGGATCTTCTT
AAGTTGCTTGCAGATCAGCTAGAGCCACTGACTGAGCAGCAGCTTGCCAGCATATACAAC
CAGCAGCAATCTTCCCAACAGGCAGAAGAAACTCTTTCTCAAGGGATGGAAATTATACAA
GATTCTCTTGCGAAAACCGTTGCATCCCAACTTGGCCGTGCAGGTTCTTCTTCTCCTAGC
AATGCTGCAGATCACACGGCTGCGGCATTGGGAAAGATCGGCGACATGGAAAGCTTGCTG
CAGCAGGCTGATGATCTGCGGATGCAAAGTCTCCAGAAAATGCAGCGGGTGCTGACCACC
CGGCAATCTGCAAGGGCGCTGCTCTTAGTCAGTGACTACTTCTCCCGGCTTCGCGCTCTG
AATTCTCTCTGGATCGCACGTCCACAGCAATGA

Peptide Sequence

PEP ID

Os05t0492000-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:24180216:24182268:1 gene:Os05g0492000 transcript:Os05t0492000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 43 description:Similar to BZIP transcription factor. (Os05t0492000-00)
Sequence

MVYASPGTDASTDPDIDKNIRMFEQGDPPTPIAYCPRDKSKGKLGQKTLRRLAQNREAAR
KSRLRKKAYVQQLEDSRMKLTQLEQELQRARQQGIIISTSGDQQRSTSENEALAFNMEYM
RWLEEHNKQINELRSAVHTHAGDDDLQNIVSSVMAHHEEIFRIKGLAAKADALHVLSATW
RTPLERCFLWLGGFRPSDLLKLLADQLEPLTEQQLASIYNQQQSSQQAEETLSQGMEIIQ
DSLAKTVASQLGRAGSSSPSNAADHTAAALGKIGDMESLLQQADDLRMQSLQKMQRVLTT
RQSARALLLVSDYFSRLRALNSLWIARPQQ

Transcript Sequence

Transcript ID

Os05t0492000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:24180216:24182268:1 gene:Os05g0492000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 43 description:Similar to BZIP transcription factor. (Os05t0492000-00)
Sequence

CACTGCAATCTGTTCCTTCAGTTGTAAAACTGCTGCGGCACCCGTCTCAGGATCCCAGTA
AACAGCAAAGCGAAAGGAAGCGCACTAGATCAATAATATTATAAATATTAAGTGCATTTT
TAGCTGAGAGGAGTTTAATATGGTTTATGCAAGCCCTGGGACAGATGCATCAACAGATCC
AGACATTGACAAGAATATCCGGATGTTTGAACAAGGGGATCCTCCTACTCCCATAGCTTA
TTGTCCTAGAGACAAATCAAAAGGCAAACTAGGTCAAAAGACACTACGTCGTCTTGCCCA
AAATCGCGAAGCGGCTAGGAAAAGCCGTTTAAGGAAGAAGGCATATGTCCAACAGCTTGA
GGATAGCAGGATGAAACTTACTCAATTGGAGCAGGAGCTTCAACGTGCTCGTCAACAGGG
CATTATCATTTCAACATCGGGAGACCAACAACGTTCAACGAGTGAAAATGAAGCTCTGGC
TTTTAACATGGAGTACATGCGCTGGCTGGAGGAGCATAACAAGCAGATAAATGAGCTGAG
GTCTGCAGTCCACACTCATGCCGGTGACGATGATCTTCAGAACATTGTTAGTAGCGTCAT
GGCGCACCATGAAGAAATCTTCAGGATCAAGGGTTTAGCAGCAAAGGCTGATGCTCTCCA
TGTGTTATCAGCAACCTGGAGGACCCCTCTTGAGAGGTGTTTTCTTTGGTTAGGTGGATT
CCGACCATCGGATCTTCTTAAGTTGCTTGCAGATCAGCTAGAGCCACTGACTGAGCAGCA
GCTTGCCAGCATATACAACCAGCAGCAATCTTCCCAACAGGCAGAAGAAACTCTTTCTCA
AGGGATGGAAATTATACAAGATTCTCTTGCGAAAACCGTTGCATCCCAACTTGGCCGTGC
AGGTTCTTCTTCTCCTAGCAATGCTGCAGATCACACGGCTGCGGCATTGGGAAAGATCGG
CGACATGGAAAGCTTGCTGCAGCAGGCTGATGATCTGCGGATGCAAAGTCTCCAGAAAAT
GCAGCGGGTGCTGACCACCCGGCAATCTGCAAGGGCGCTGCTCTTAGTCAGTGACTACTT
CTCCCGGCTTCGCGCTCTGAATTCTCTCTGGATCGCACGTCCACAGCAATGAGTTAAAAT
CGATTTGATTTTCACTGATCCGTAGTGCGTTACGTTCTTGATAGCTTTGTGTTTGCTCAC
AAGAATCGAAGTA