Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0490300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:24089745:24091692:-1 gene:Os05g0490300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 265 description:Cyclin-like F-box domain containing protein. (Os05t0490300-01)
Sequence	GAAAACGGCGCGACCCTTCTCCCGATTTCGCGATTTCGGTACCGTACGGTTGCTCGTCGG CGTCGGATCCGGACGCGTGTGGGCGGCGAAAGGTTGGCCCTCGCGGTTGATTTGGTGGTG GCGCGGTGTCTGAGATGGTTGCGTGAGCCATTCGGAGAGGACAAGGTCGAGGAGGAGCAG CAGCTTCTGTTCGTGGCATTTCTGTTGCAAAGATTAGTGCTCCATTTCTCTGCAACCTCG CGCGGGGGGGAGGGGGGGAGGGCGTTTGATCCATTTCTCCATTTCGGGTGGTTTCCAATG GCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGGCTGCCGGACTCG CTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGCCGGTGCTCCGCC GTGTCGAAGCGGTTCTACGGGCTCGTGCCCCTCGTCCATGATGTCTATGTCAAGATCGAC CGCGTCGTGACGGTCGACGGCGAAGCTGAGGACGCGCTTAACCTGTCCTCGCCGAAGCCG AGGAACATCCTCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATCAAGCCGTTCCAC AGCATGCGCGGCCCGAACGGTGCTGGGCGGCCGCTGTTCCCGCAGCTCGCGCAGCACTCG CCGGCGCAGGTGCTCCGGAACTTCACGCACATCCGGAATCTGCGGGTGGAGCTGCCCTCG GGGGATGTGGGGACTGAGGAGGGAGTTCTCCTGAAATGGCGAGCGGAGTATGGGAGTACG CTTCAGAATTGTGTGATTCTTGGGGGTACTCAGGTCGACCGCAAGCCTGTTGGTGCAGAG CATGAGCTGTATTCGGAGGACAATGGAAGCATGCCGGAATCCTTCTATACCAATGGAGGG TTGAAACTCCGCGTCGTGTGGACAATCAGCTCTCTGATTGCGGCATCAACGAGACATTAT CTTCTTCGGTCAATTATCAAGGATCATCCCACTCTTACAAGCTTGGTACTGACCGATGCT GATGGCCAGGGCACATTGTCCATGGGAGCGGAGCAGCTTAAGGAATTTAGGGAGAACCAG TTGTCGGCCTCAGCATGTTCTAACAGGACTCAGGTTCCAGCATGCAACATGAAGCTCAAA TACGCTCCATATCTTGAGCTTCCTGGCGGCATTGCGTTGCAAGGTGCAACGTTGGTCGCT ATCAAGCCCTCACCCGAGGGAAGCAATGGCGGTCATACTAGCCGCAAGGAAACGGATGCA TTTGTCTCCGGAGCATTTGATGGACCATTCAAGTTTGCTGTGAAGGCGCTGATGAAGAGG CGAACTTACCTTCTGGAGATGAATGGCTTCTAG

Peptide Sequence

PEP ID	Os05t0490300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:24089745:24091692:-1 gene:Os05g0490300 transcript:Os05t0490300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 265 description:Cyclin-like F-box domain containing protein. (Os05t0490300-01)
Sequence	ENGATLLPISRFRYRTVARRRRIRTRVGGERLALAVDLVVARCLRWLREPFGEDKVEEEQ QLLFVAFLLQRLVLHFSATSRGGEGGRAFDPFLHFGWFPMARIHADPVLEADQFDRLPDS LVLVILNNVEDVRSLGRCSAVSKRFYGLVPLVHDVYVKIDRVVTVDGEAEDALNLSSPKP RNILSHFLKMMLFTIIKPFHSMRGPNGAGRPLFPQLAQHSPAQVLRNFTHIRNLRVELPS GDVGTEEGVLLKWRAEYGSTLQNCVILGGTQVDRKPVGAEHELYSEDNGSMPESFYTNGG LKLRVVWTISSLIAASTRHYLLRSIIKDHPTLTSLVLTDADGQGTLSMGAEQLKEFRENQ LSASACSNRTQVPACNMKLKYAPYLELPGGIALQGATLVAIKPSPEGSNGGHTSRKETDA FVSGAFDGPFKFAVKALMKRRTYLLEMNGF

Transcript Sequence

Transcript ID	Os05t0490300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:24089745:24091692:-1 gene:Os05g0490300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 265 description:Cyclin-like F-box domain containing protein. (Os05t0490300-01)
Sequence	CTTCTTCTTCTTCGCGAAAACGAAAGAAAAGGAGAGGCAAGAACAAGAACATCTCATCCC CAATTCCCCTCTCCCTAAACCCTAATCCCGTCCGATTCGCCCCCACCGGCCTCCAAGATC GAAGCTCTTTCGGCATCTCCGGCTGGTCGGAGAGGAGCTGCGCGTGGAGGGGGGGACTCT CGATTCCGGTGAGAAAACGGCGCGACCCTTCTCCCGATTTCGCGATTTCGGTACCGTACG GTTGCTCGTCGGCGTCGGATCCGGACGCGTGTGGGCGGCGAAAGGTTGGCCCTCGCGGTT GATTTGGTGGTGGCGCGGTGTCTGAGATGGTTGCGTGAGCCATTCGGAGAGGACAAGGTC GAGGAGGAGCAGCAGCTTCTGTTCGTGGCATTTCTGTTGCAAAGATTAGTGCTCCATTTC TCTGCAACCTCGCGCGGGGGGGAGGGGGGGAGGGCGTTTGATCCATTTCTCCATTTCGGG TGGTTTCCAATGGCTCGAATCCATGCCGACCCGGTGCTGGAGGCCGACCAATTCGACCGG CTGCCGGACTCGCTTGTGCTGGTGATCCTCAACAATGTCGAGGATGTGCGCTCGCTCGGC CGGTGCTCCGCCGTGTCGAAGCGGTTCTACGGGCTCGTGCCCCTCGTCCATGATGTCTAT GTCAAGATCGACCGCGTCGTGACGGTCGACGGCGAAGCTGAGGACGCGCTTAACCTGTCC TCGCCGAAGCCGAGGAACATCCTCTCGCATTTCCTCAAGATGATGCTGTTCACGATCATC AAGCCGTTCCACAGCATGCGCGGCCCGAACGGTGCTGGGCGGCCGCTGTTCCCGCAGCTC GCGCAGCACTCGCCGGCGCAGGTGCTCCGGAACTTCACGCACATCCGGAATCTGCGGGTG GAGCTGCCCTCGGGGGATGTGGGGACTGAGGAGGGAGTTCTCCTGAAATGGCGAGCGGAG TATGGGAGTACGCTTCAGAATTGTGTGATTCTTGGGGGTACTCAGGTCGACCGCAAGCCT GTTGGTGCAGAGCATGAGCTGTATTCGGAGGACAATGGAAGCATGCCGGAATCCTTCTAT ACCAATGGAGGGTTGAAACTCCGCGTCGTGTGGACAATCAGCTCTCTGATTGCGGCATCA ACGAGACATTATCTTCTTCGGTCAATTATCAAGGATCATCCCACTCTTACAAGCTTGGTA CTGACCGATGCTGATGGCCAGGGCACATTGTCCATGGGAGCGGAGCAGCTTAAGGAATTT AGGGAGAACCAGTTGTCGGCCTCAGCATGTTCTAACAGGACTCAGGTTCCAGCATGCAAC ATGAAGCTCAAATACGCTCCATATCTTGAGCTTCCTGGCGGCATTGCGTTGCAAGGTGCA ACGTTGGTCGCTATCAAGCCCTCACCCGAGGGAAGCAATGGCGGTCATACTAGCCGCAAG GAAACGGATGCATTTGTCTCCGGAGCATTTGATGGACCATTCAAGTTTGCTGTGAAGGCG CTGATGAAGAGGCGAACTTACCTTCTGGAGATGAATGGCTTCTAGATATCTTGTGCTGTT ACTGGGTACCTAGCTTGTTGGTCCAGGCAGTCATCTAGTTACTTTTAACTTCTGGTCTAT GTAATAGGTTGTGCTTTGCTCTCTGTTGTATTAGCTCTCTGTACAGTGGTGACATTCTGT TGGTTATATGGAAATCATATCAAGTTAGTGTATCTTTCTCATTGCTCTCCCAATGCCATG TCATGATTTTATGCAACTAACATCATGCAAGCTGATTGTTTGCTCTTTTTGTC