Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0486100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23899488:23905448:-1 gene:Os05g0486100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leucine-rich repeat receptor-like kinase 1 description:Leucine-rich repeat receptor-like kinase, Mn<sup>2+</sup>/Mg<sup>2+</sup>-dependent serine/threonine (Ser/Thr) kinase, Ca<sup>2+</sup>-independent Ser/Thr kinase, Negative regulation of polar auxin transport, Root development (Os05t0486100-01);Hypothetical conserved gene. (Os05t0486100-02)
Sequence	ATGGAGCCGCGGGTGTTGATGGCTCTTGCGCTGGTGGTGGTGGCGGCGGGCGTGCCGGCG GTGTTGTGCCAGACCAACGCCCAGGACGCTGCGGCGCTCGAGGGGCTGAAGAGCCAATGG ACGAACTACCCGTTGAGCTGGAACTCCGGCGACCCCTGCGGCGGCGGATGGGACGGCATC ATGTGCACCAACGGCAGGGTGACGACGCTGAGGCTGTCAAGCGTCAGCCTGCAGGGAACA CTGAGCAGCAGCATCGGCCAGCTCGGCCAGCTCACGTACCTGGATCTTTCCTTCAACATC AATCTCGGTGGTCCGCTGCCAGCTGAGATTGGGAACCTTGGGGAGCTTACGACACTGATC TTAGCTGGTTGCAGCTTCACTGGAAACATTCCAATAGCAATAGGCAACCTGCGGAAACTT GGGTTCTTGGCCTTGAATTCAAACAAGTTTAGTGGTGGAATACCGTCTTCGATTGGCGTA CTCACAAACCTCTTATGGCTAGACCTGGCTGATAATCAACTCACTGGATCTGTCCCCATC TCAACATCAACATCACCAGGCCTGGACCAACTTGTCAAAACGCAGCACTTCCATTTCAAC AAGAACCAGTTAACTGGAACGCTTACTGGACTTTTCAACTCCAATATGACTCTCATACAC ATTTTGTTTGATAGCAACAAATTCTCAGGCTCAATCCCAGCTGAGGTTGGGACTGTTAGT ACACTCGAAGTTCTCCGATTGGATAGGAATGGTTTTACGGGAGCAATACCTGCTACAATT GGCAGTTTGGTCAAACTGAATGAGCTGAACTTAGCAAACAACAAGCTAACTGGATCAGTG CCAGATCTCAGCAACATGACCAACTTGAATGTTGTGGATTTGAGCAACAACACATTTGAT CCTTCAGTGGCCCCCAGCTGGTTCACATCTTTAACATCTCTTGCTTCTGTTTCAATAGTT TCTGGAAGTCTTTCTGGCCAGGTCCCAAAGGGGCTCTTCACATTGCCCACACTGCAGCAA GTTGTGCTGAGCAACAACCAATTCAACGGGACACTTGAAATTACAGGCAACATCAGCAGC TCACTGCAGACAGTAAATCTCATGGACAACCGAATAGTTTCTACCGATACTGCAAGCTAC AAGAAAACTCTACTCCTGGCAGGTAATCCGTTTTGCGCCGAGCAAGATCCCAACAACAGA GCCTTCTGCAGCAGGCAGCTACAGAACGCGAGCCCATACAGTACCAGTATGGAAAAATGC GGCTCAGCTCAGTGCAGTGATGGTCAGAACGTGAACCCTGCAAGCTGCGGCTGTGCTTTC TCATACAACGGCAAGATGGTTTTCAGGGCACCCTTCTTCGTCGACTTGGTGAGCAGTACG CCGTTCCAGCTGCTGGAGTCGACCATGGCGGCAAAGCTGAACCTGCTCCCTGGCTCGGTC GCTCTCTCAGACATCCACTTCAACAGTGACAACTACCTCCAAGTTCAAGTGAAGCTGTTC CCAACATCCGGGGTGACCTTCAACCTGTCAGAATTGACAAGGATTGGTTCTTCTCTCAGT AACCAGATTTACAAACCACCAGCAAATTTTGGACCTTATTTCTTCATTGCAGACCCATAT GCCCCCTTGGCAGTTGCTCTTGGTGGCAAAAAATCCAAGATGAGCACAGGTGCCATAGCT GGAATTGCAGTAGCCGGTGGGGTCCTTGTTATCGCCCTCATTTTCATGTCATTGTTTGCT CTCCGACAGAAGAGAAGGGCTAAGGAACTCAAGGAAAGAGCAGACCCTTTTGCTTCATGG GCTGCTGGCCAGAAGGACAGTGGAGGGGCTCCACAGCTGAAGGGAGCAAGGTTCTTCTCC TTTGACGAGCTCAAGATCTGCACCAACAACTTCTCTGACAACCACGAGATCGGGTCAGGA GGCTACGGGAAGGTGTACAGAGGGATTCTCGGTGACGGAACCCGTGTCGCCATCAAGCGT GCAGACCGCAACTCAATGCAGGGCGCTGTGGAGTTCAAGAACGAGATCGAGCTGCTGTCC AGGGTGCACCACCGCAACCTGGTCAGCCTCATTGGCTTCTGCTACGAGCAAGGTGAACAG ATGCTCGTCTACGAGTACATCTCCAATGGCACACTCAGAGAGAACTTGACGGGAAGTGGG ATGTACTTGGACTGGAAGAAGAGGCTGAGGATCGCGCTTGGCTCGGCCAGAGGGCTTGCC TACCTGCACGAGCTCGCTGACCCACCGATCATCCACCGCGACATCAAGTCCACCAACATC CTCCTCGACAACAACCTCAAGGCCAAGGTTGCCGACTTCGGGCTCTCCAAGCTCGTGGCC GACACTGAGAAGGGCCATGTCTCCACCCAAGTCAAGGGAACACTGGGCTACCTGGACCCG GAGTACTACATGACGCAGCAGCTGTCGGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTG ATGCTGGAGCTGGTGAGCGGGAGGCAGCCGATCGAGAAGGGGCGGTACGTGGTGCGGGAG GTGCGGCTGGCCATCGACCCGGCCGACCACGACCACCACTACGGCCTCCGCGGGATCGTC GACCCGGCCATCCGCGACGCCGCGCGCACCCCGGTGTTCCGGCGGTTCGTGCAGCTGGCG ATGCGGTGCGTCGACGAGTCGGCGGCGGCGCGCCCGGCCATGGGCGCCGTGGTGAAGGAG ATCGAGGCCATGCTGCAGAACGAGCCCGACGACGCCGGCGCCGGGGAGGGGGACAGCTCC GCCGACCCGTCCGCCAACGAGTTCGACCGCCACCGCGGCGGTGGCGGCCCGCCGGCGCAC CCCTACAGCGACGTGGAGATCAGCCGGGGATCGTACGCCGGCGATGGCGCGTCGGATTAC ATGCCCTATTTTGAGGTCAAGCCCAAGTAG

Peptide Sequence

PEP ID	Os05t0486100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23899488:23905448:-1 gene:Os05g0486100 transcript:Os05t0486100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leucine-rich repeat receptor-like kinase 1 description:Leucine-rich repeat receptor-like kinase, Mn<sup>2+</sup>/Mg<sup>2+</sup>-dependent serine/threonine (Ser/Thr) kinase, Ca<sup>2+</sup>-independent Ser/Thr kinase, Negative regulation of polar auxin transport, Root development (Os05t0486100-01);Hypothetical conserved gene. (Os05t0486100-02)
Sequence	MEPRVLMALALVVVAAGVPAVLCQTNAQDAAALEGLKSQWTNYPLSWNSGDPCGGGWDGI MCTNGRVTTLRLSSVSLQGTLSSSIGQLGQLTYLDLSFNINLGGPLPAEIGNLGELTTLI LAGCSFTGNIPIAIGNLRKLGFLALNSNKFSGGIPSSIGVLTNLLWLDLADNQLTGSVPI STSTSPGLDQLVKTQHFHFNKNQLTGTLTGLFNSNMTLIHILFDSNKFSGSIPAEVGTVS TLEVLRLDRNGFTGAIPATIGSLVKLNELNLANNKLTGSVPDLSNMTNLNVVDLSNNTFD PSVAPSWFTSLTSLASVSIVSGSLSGQVPKGLFTLPTLQQVVLSNNQFNGTLEITGNISS SLQTVNLMDNRIVSTDTASYKKTLLLAGNPFCAEQDPNNRAFCSRQLQNASPYSTSMEKC GSAQCSDGQNVNPASCGCAFSYNGKMVFRAPFFVDLVSSTPFQLLESTMAAKLNLLPGSV ALSDIHFNSDNYLQVQVKLFPTSGVTFNLSELTRIGSSLSNQIYKPPANFGPYFFIADPY APLAVALGGKKSKMSTGAIAGIAVAGGVLVIALIFMSLFALRQKRRAKELKERADPFASW AAGQKDSGGAPQLKGARFFSFDELKICTNNFSDNHEIGSGGYGKVYRGILGDGTRVAIKR ADRNSMQGAVEFKNEIELLSRVHHRNLVSLIGFCYEQGEQMLVYEYISNGTLRENLTGSG MYLDWKKRLRIALGSARGLAYLHELADPPIIHRDIKSTNILLDNNLKAKVADFGLSKLVA DTEKGHVSTQVKGTLGYLDPEYYMTQQLSEKSDVYSFGVVMLELVSGRQPIEKGRYVVRE VRLAIDPADHDHHYGLRGIVDPAIRDAARTPVFRRFVQLAMRCVDESAAARPAMGAVVKE IEAMLQNEPDDAGAGEGDSSADPSANEFDRHRGGGGPPAHPYSDVEISRGSYAGDGASDY MPYFEVKPK

Transcript Sequence

Transcript ID	Os05t0486100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23899488:23905448:-1 gene:Os05g0486100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leucine-rich repeat receptor-like kinase 1 description:Leucine-rich repeat receptor-like kinase, Mn<sup>2+</sup>/Mg<sup>2+</sup>-dependent serine/threonine (Ser/Thr) kinase, Ca<sup>2+</sup>-independent Ser/Thr kinase, Negative regulation of polar auxin transport, Root development (Os05t0486100-01);Hypothetical conserved gene. (Os05t0486100-02)
Sequence	GCGCGGACTCTTCTCCTCTTCTTCCTCCACCTCCTCCTCCACGATCTCCGGTCAAGCAGA GCACAAGCGTGTGCTAGCTCTCCCGGTGGCTTGCCTCGCCGGCGACGGCGCGGCGCAGGA TGGAGCCGCGGGTGTTGATGGCTCTTGCGCTGGTGGTGGTGGCGGCGGGCGTGCCGGCGG TGTTGTGCCAGACCAACGCCCAGGACGCTGCGGCGCTCGAGGGGCTGAAGAGCCAATGGA CGAACTACCCGTTGAGCTGGAACTCCGGCGACCCCTGCGGCGGCGGATGGGACGGCATCA TGTGCACCAACGGCAGGGTGACGACGCTGAGGCTGTCAAGCGTCAGCCTGCAGGGAACAC TGAGCAGCAGCATCGGCCAGCTCGGCCAGCTCACGTACCTGGATCTTTCCTTCAACATCA ATCTCGGTGGTCCGCTGCCAGCTGAGATTGGGAACCTTGGGGAGCTTACGACACTGATCT TAGCTGGTTGCAGCTTCACTGGAAACATTCCAATAGCAATAGGCAACCTGCGGAAACTTG GGTTCTTGGCCTTGAATTCAAACAAGTTTAGTGGTGGAATACCGTCTTCGATTGGCGTAC TCACAAACCTCTTATGGCTAGACCTGGCTGATAATCAACTCACTGGATCTGTCCCCATCT CAACATCAACATCACCAGGCCTGGACCAACTTGTCAAAACGCAGCACTTCCATTTCAACA AGAACCAGTTAACTGGAACGCTTACTGGACTTTTCAACTCCAATATGACTCTCATACACA TTTTGTTTGATAGCAACAAATTCTCAGGCTCAATCCCAGCTGAGGTTGGGACTGTTAGTA CACTCGAAGTTCTCCGATTGGATAGGAATGGTTTTACGGGAGCAATACCTGCTACAATTG GCAGTTTGGTCAAACTGAATGAGCTGAACTTAGCAAACAACAAGCTAACTGGATCAGTGC CAGATCTCAGCAACATGACCAACTTGAATGTTGTGGATTTGAGCAACAACACATTTGATC CTTCAGTGGCCCCCAGCTGGTTCACATCTTTAACATCTCTTGCTTCTGTTTCAATAGTTT CTGGAAGTCTTTCTGGCCAGGTCCCAAAGGGGCTCTTCACATTGCCCACACTGCAGCAAG TTGTGCTGAGCAACAACCAATTCAACGGGACACTTGAAATTACAGGCAACATCAGCAGCT CACTGCAGACAGTAAATCTCATGGACAACCGAATAGTTTCTACCGATACTGCAAGCTACA AGAAAACTCTACTCCTGGCAGGTAATCCGTTTTGCGCCGAGCAAGATCCCAACAACAGAG CCTTCTGCAGCAGGCAGCTACAGAACGCGAGCCCATACAGTACCAGTATGGAAAAATGCG GCTCAGCTCAGTGCAGTGATGGTCAGAACGTGAACCCTGCAAGCTGCGGCTGTGCTTTCT CATACAACGGCAAGATGGTTTTCAGGGCACCCTTCTTCGTCGACTTGGTGAGCAGTACGC CGTTCCAGCTGCTGGAGTCGACCATGGCGGCAAAGCTGAACCTGCTCCCTGGCTCGGTCG CTCTCTCAGACATCCACTTCAACAGTGACAACTACCTCCAAGTTCAAGTGAAGCTGTTCC CAACATCCGGGGTGACCTTCAACCTGTCAGAATTGACAAGGATTGGTTCTTCTCTCAGTA ACCAGATTTACAAACCACCAGCAAATTTTGGACCTTATTTCTTCATTGCAGACCCATATG CCCCCTTGGCAGTTGCTCTTGGTGGCAAAAAATCCAAGATGAGCACAGGTGCCATAGCTG GAATTGCAGTAGCCGGTGGGGTCCTTGTTATCGCCCTCATTTTCATGTCATTGTTTGCTC TCCGACAGAAGAGAAGGGCTAAGGAACTCAAGGAAAGAGCAGACCCTTTTGCTTCATGGG CTGCTGGCCAGAAGGACAGTGGAGGGGCTCCACAGCTGAAGGGAGCAAGGTTCTTCTCCT TTGACGAGCTCAAGATCTGCACCAACAACTTCTCTGACAACCACGAGATCGGGTCAGGAG GCTACGGGAAGGTGTACAGAGGGATTCTCGGTGACGGAACCCGTGTCGCCATCAAGCGTG CAGACCGCAACTCAATGCAGGGCGCTGTGGAGTTCAAGAACGAGATCGAGCTGCTGTCCA GGGTGCACCACCGCAACCTGGTCAGCCTCATTGGCTTCTGCTACGAGCAAGGTGAACAGA TGCTCGTCTACGAGTACATCTCCAATGGCACACTCAGAGAGAACTTGACGGGAAGTGGGA TGTACTTGGACTGGAAGAAGAGGCTGAGGATCGCGCTTGGCTCGGCCAGAGGGCTTGCCT ACCTGCACGAGCTCGCTGACCCACCGATCATCCACCGCGACATCAAGTCCACCAACATCC TCCTCGACAACAACCTCAAGGCCAAGGTTGCCGACTTCGGGCTCTCCAAGCTCGTGGCCG ACACTGAGAAGGGCCATGTCTCCACCCAAGTCAAGGGAACACTGGGCTACCTGGACCCGG AGTACTACATGACGCAGCAGCTGTCGGAGAAGAGCGACGTGTACAGCTTCGGGGTGGTGA TGCTGGAGCTGGTGAGCGGGAGGCAGCCGATCGAGAAGGGGCGGTACGTGGTGCGGGAGG TGCGGCTGGCCATCGACCCGGCCGACCACGACCACCACTACGGCCTCCGCGGGATCGTCG ACCCGGCCATCCGCGACGCCGCGCGCACCCCGGTGTTCCGGCGGTTCGTGCAGCTGGCGA TGCGGTGCGTCGACGAGTCGGCGGCGGCGCGCCCGGCCATGGGCGCCGTGGTGAAGGAGA TCGAGGCCATGCTGCAGAACGAGCCCGACGACGCCGGCGCCGGGGAGGGGGACAGCTCCG CCGACCCGTCCGCCAACGAGTTCGACCGCCACCGCGGCGGTGGCGGCCCGCCGGCGCACC CCTACAGCGACGTGGAGATCAGCCGGGGATCGTACGCCGGCGATGGCGCGTCGGATTACA TGCCCTATTTTGAGGTCAAGCCCAAGTAGTCATCATTAGATTGTAAATTGATGAGGGTGT TGTTTGTTTCAGTTTTTTTTTCCTTTGTTCTTTCTCCTTTTCAGCTTGTGATGAATTGTA AATTTTGTATGTGTTGCGAGTTGCGACAGATTAATATATACTGCTACAGATTCTTTC