Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0485300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23865753:23869389:1 gene:Os05g0485300 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os05t0485300-01)
Sequence	ATGGATGTGAGGTTTGGGCCCGAGGAGCAGATCGTGTGGCCGGCTTCTGTTCTTGCTGGG ATCCTCATGTGCGCAGCGGTATATGATATAACTCGTGAAGTTAGCTCCCGGTGCTACAAG GGTTATAATGGACTGAATGAATTGCACAAACTTGAGTGGAACAACAGGGGATTCTCTACC TTCCACGCATTAGTTGCTGCTGTAGTCTCTTTTTATCTGCTGGTGATATCTGACCTCTTC AGTAAGGACGTCCATGGTGCCATCATAATTGATCGAAAATCATGGATGTCTGATGCCATG TTTGGTGTATCCCTGGGCTACTTCTTGACAGATTTGTTGATGATCCTCTGGCATTTCCCT TCTCTAGGAGGAAAGGAATATCTCTTGCATCATGGATTGTCCATGTATGCAATCTCTCTT GCTCTGTTGAGTGGCAAAGGACACGTGTACATCCTCATGGTCCTCATCACTGAAGCAACC ACACCCTTCGTGAACCTCAGATGGTACCTTGATCTTGCAGGCCGGAAGGACTCCAAGCTT TACCTGTACAACGGGGTGGCACTGTTTGCTGGATGGCTGGTTGCTCGCGTCATACTGTTC GTATACTTCTTCGCTCATGTGTACCTTCACTTCGACCAGGTGAGGACGGTGTTCCCGCTA GGGTTCTACAGTATGATGGCGGTGCCGCCGGCGATGTCGGCGATGAACCTCCTCTGGTTC CGGAAGATCTGCAAGGGGATGGTCAAGGCCATGTCCAGCGCCAACCGAAGTCAATGCGTC AAGACAGATTAG

Peptide Sequence

PEP ID	Os05t0485300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23865753:23869389:1 gene:Os05g0485300 transcript:Os05t0485300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os05t0485300-01)
Sequence	MDVRFGPEEQIVWPASVLAGILMCAAVYDITREVSSRCYKGYNGLNELHKLEWNNRGFST FHALVAAVVSFYLLVISDLFSKDVHGAIIIDRKSWMSDAMFGVSLGYFLTDLLMILWHFP SLGGKEYLLHHGLSMYAISLALLSGKGHVYILMVLITEATTPFVNLRWYLDLAGRKDSKL YLYNGVALFAGWLVARVILFVYFFAHVYLHFDQVRTVFPLGFYSMMAVPPAMSAMNLLWF RKICKGMVKAMSSANRSQCVKTD

Transcript Sequence

Transcript ID	Os05t0485300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23865753:23869389:1 gene:Os05g0485300 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os05t0485300-01)
Sequence	GTTGTACGCGGACGACTCAATCGGTTAGCTCGCTTCGTCGTCCACCGTCTCCCTCGGTCA CCGTCGCCGCGCACGACTCCCATCCATGGCGATCGAGCTCTGCCCATTTAAGCCCGGGGC GCCTCTCTTCGAGGACTTGCAAACGCTTGCTGCAAGGATTGGATCCTCTGGCTTCTGTTG ATTTGGGGAGCTTTTCATCGTCTCGACCGAACGGCCAGCCGCCGAGATCGAGGAAGGAGG AGATCGAAGGGCAGAGTGATTTGGCAGCGGTGGACATGGATGTGAGGTTTGGGCCCGAGG AGCAGATCGTGTGGCCGGCTTCTGTTCTTGCTGGGATCCTCATGTGCGCAGCGGTATATG ATATAACTCGTGAAGTTAGCTCCCGGTGCTACAAGGGTTATAATGGACTGAATGAATTGC ACAAACTTGAGTGGAACAACAGGGGATTCTCTACCTTCCACGCATTAGTTGCTGCTGTAG TCTCTTTTTATCTGCTGGTGATATCTGACCTCTTCAGTAAGGACGTCCATGGTGCCATCA TAATTGATCGAAAATCATGGATGTCTGATGCCATGTTTGGTGTATCCCTGGGCTACTTCT TGACAGATTTGTTGATGATCCTCTGGCATTTCCCTTCTCTAGGAGGAAAGGAATATCTCT TGCATCATGGATTGTCCATGTATGCAATCTCTCTTGCTCTGTTGAGTGGCAAAGGACACG TGTACATCCTCATGGTCCTCATCACTGAAGCAACCACACCCTTCGTGAACCTCAGATGGT ACCTTGATCTTGCAGGCCGGAAGGACTCCAAGCTTTACCTGTACAACGGGGTGGCACTGT TTGCTGGATGGCTGGTTGCTCGCGTCATACTGTTCGTATACTTCTTCGCTCATGTGTACC TTCACTTCGACCAGGTGAGGACGGTGTTCCCGCTAGGGTTCTACAGTATGATGGCGGTGC CGCCGGCGATGTCGGCGATGAACCTCCTCTGGTTCCGGAAGATCTGCAAGGGGATGGTCA AGGCCATGTCCAGCGCCAACCGAAGTCAATGCGTCAAGACAGATTAGGACTTGGGTAAAA GGAGATGCAACGCTGTCTGGAAGCCAAATGCTTACTAGCTTGCTTGTTTGATGATTAACT AAACTGTAATCAATCAATTGATTATTTGAAAACC