Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0485000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23839410:23842483:-1 gene:Os05g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os05t0485000-01)
Sequence	ATGGCCCCGATCATGAGTGGGGCGGCGGCGGCGGCGGGGGGCACGGGCGGCGCGGTCCCG CTCATCAAGAACGCCACCTCCGCGTCCCAGATGTCGCGTGGCAAGGCCGGCACCGGCGCC GGCGCGGTCGTCTGCTACTCCCCGATGATGGTCACCGCCTACGGCATCTGGCAGGGCGCC TCCCCTCTTGACTTCTCCCTCCCCCTCTTCCTCCTCCAGGTCGCCATCATCGTCGCCACC ACCCGCCTCCTCGTCATCCTCCTCAAGCCCTTCCGCCAGCCTCGCGTCATCGCGGAGATC CTCGCTGGCGTGATACTGGGGCCGTCGGTGATGGGGCAGGTTTCGACGTGGGCGGTGAAA GTGTTCCCGGAGCGGAGCTTGCTGACGCTGGAGACGGTGGCGCACCTGGGGCTCCTCTAC TTCCTCTTCCTGGTCGGCCTCGAGATGGACGTGAACACCATCAGGAGGTCGGGGAAGAAG GCGCTCATCATCGCCGTCGCCGGCATGGCGCTGCCGTTCTGCATCGGCACGGCGACGTCG TTCATCTTCCGGCACCAGGTGTCCAAGAACGTGCACCAGGCCTCCTTCCTGCTCTTCCTC GGCGTCGCGCTCTCCGTCACCGCGTTCCCGGTGCTGGCGCGCATCCTCGCCGAGGTCAAG CTGCTCAACTCCGACCTCGGCCGGATCGCCATGTCCGCCGCCATCGTCAACGACATGTGC GCCTGGATCCTCCTCGCGCTCGCCATCGCCATCTCAGAGGTCAACAGTTCGGCCTTCTCC TCCCTCTGGGTGCTCATCGCCGGGGTGGCCTTCGTGCTCGCCTGCTTCTACGTCGTCCGC CCGCTCATGTGGTGGATCGTCCGCCGCGTCCCCGAGGGGGAGGCCATCGGCGACGTGCAC ATCACGCTCATCCTCACCGGCGTCATGGTCGCCGGCGTCTGCACCGACGCCATCGGCATC CACTCCGTGTTCGGCGCGTTCGTGTACGGCCTCGTCATGCCGAGCGGCCCGCTCGGCGTC GTGCTAATCGAGAAGCTCGAGGACTTCGTCACCGGCCTCCTCCTGCCGCTCTTCTTCGCC ATCAGTGGCCTCCGCACGAACGTGACCAAGGTCCGGGACCCCATCACCGTGGGCCTCCTC GTGCTCGTGTTCGTCATGGCCAGCTTCGCCAAGATCATGGGCACCATCCTCATCGCCGTC TCCTACACCATGACGTTCCGCGACGGCGTCGCCCTGGGGTTCCTCATGAACACCAGGGGC CTCGTCGAGATGATCGTCCTCAACATCGGGAGGGACAAGGAGGTGCTCGACGACGAGTCG TTCGCCGTGATGGTGCTGGTGTCGGTGGCCATGACGGCGCTGGTCACGCCGGTGGTGACG ACGGTGTACCGGCCGGCGCGGCGGCTGGTCGGGTACAAGCGGCGGAACCTGCAGCGGTCG AAGCACGACGCGGAGCTCCGGATGCTGGCGTGCGTGCACACCACCCGCAACGTGCCGTCG ATCATCTCGCTGCTCGAGCTCTCCAACCCGACGAAGCGCTCGCCGATCTTCATCTACGCG CTCCACCTCGTCGAGCTCACCGGCCGCGCCTCCAACATGCTCGCCGCGCACCACTCGGCG TCGAACCCGGGCGGCGCCAGCGACCACATCTTCAACGCGTTCGAGAGCTACGAGGAGATG GTCGGCGGCGTGTCGGTGCAGGCGCTCACGGCGGTGTCGCCGTACCAGACGATGCACGAG GACGTGTGCGTGCTGGCGGAGGACAAGCACGTCTCGCTCATCGTGCTCCCGTTCCACAAG CAGCAGACGGTGGACGGCGGCATGGAGCCCATCAACGCGTCGCTCCGGGGCTTCAACGAG AGCATCCTCGCGTCGGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCAGCGCC GCCGCGGCGAGGATGGCGGCCGTGCACCACGTCGCGCTCCTCTTCTTCGGCGGGCCCGAC GACCGGGAGGGGCTCGCGTACGCGTGGCGGATGGTCGAAAACCCGGGCGTGTGCCTCACC ATCGTCCGCTTAATCCCGCCGGGGTACACGGCGCCGGCGATCTCGCCGCCGCAGCCGCCG ATGCCCGCCGCCCACTCCCGCGCCATCAACGTCGTCCCCGAGGTCGCCAAGAGCGAGCGG CAGATGGACGAGGAGTACCTCAACGAGTTCCGGTCGCGCAACCTCGGCAACGACGCCATC CTCTACGTCGAGCAGGTGGTGGCCAACAGCGAGGAGACGGTCGCCGCCATCCGCAGCCAG CTGGACAACGCGCACGAGCTGTACATCGTCGGCCGCCACCCCGGCGAGGCGAGCTCGCCG CTGACGTCGGCGCTCGCCGAGTGGATGGAGTCGCCGGAGCTCGGCCCCATCGGCGACCTC CTCGTCTCCTCCGAGTTCTCCAAGATGGCGTCCGTGCTGGTCATGCAGCAGTACGTCATC ACGGCGCCGCTGCCGCCGCCGGTGGCGCTCGCCGGGCCGCCGACGGATGACCCCGTCCGG CAGTATTTGACCAACGCCAACCAGCGGCCGTCGGTGGCGATCGGCGGCAACCAGATGGGC GCCGCCGGCCGAGGCGGATGGAGCGGCGGCGCCGGCGGGTACTGA

Peptide Sequence

PEP ID	Os05t0485000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23839410:23842483:-1 gene:Os05g0485000 transcript:Os05t0485000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os05t0485000-01)
Sequence	MAPIMSGAAAAAGGTGGAVPLIKNATSASQMSRGKAGTGAGAVVCYSPMMVTAYGIWQGA SPLDFSLPLFLLQVAIIVATTRLLVILLKPFRQPRVIAEILAGVILGPSVMGQVSTWAVK VFPERSLLTLETVAHLGLLYFLFLVGLEMDVNTIRRSGKKALIIAVAGMALPFCIGTATS FIFRHQVSKNVHQASFLLFLGVALSVTAFPVLARILAEVKLLNSDLGRIAMSAAIVNDMC AWILLALAIAISEVNSSAFSSLWVLIAGVAFVLACFYVVRPLMWWIVRRVPEGEAIGDVH ITLILTGVMVAGVCTDAIGIHSVFGAFVYGLVMPSGPLGVVLIEKLEDFVTGLLLPLFFA ISGLRTNVTKVRDPITVGLLVLVFVMASFAKIMGTILIAVSYTMTFRDGVALGFLMNTRG LVEMIVLNIGRDKEVLDDESFAVMVLVSVAMTALVTPVVTTVYRPARRLVGYKRRNLQRS KHDAELRMLACVHTTRNVPSIISLLELSNPTKRSPIFIYALHLVELTGRASNMLAAHHSA SNPGGASDHIFNAFESYEEMVGGVSVQALTAVSPYQTMHEDVCVLAEDKHVSLIVLPFHK QQTVDGGMEPINASLRGFNESILASAPCSVGILVDRGLSAAAARMAAVHHVALLFFGGPD DREGLAYAWRMVENPGVCLTIVRLIPPGYTAPAISPPQPPMPAAHSRAINVVPEVAKSER QMDEEYLNEFRSRNLGNDAILYVEQVVANSEETVAAIRSQLDNAHELYIVGRHPGEASSP LTSALAEWMESPELGPIGDLLVSSEFSKMASVLVMQQYVITAPLPPPVALAGPPTDDPVR QYLTNANQRPSVAIGGNQMGAAGRGGWSGGAGGY

Transcript Sequence

Transcript ID	Os05t0485000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23839410:23842483:-1 gene:Os05g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os05t0485000-01)
Sequence	AGCTTATACTCTCTCTCTCTCTCTCTCTCTCGTCGACGCGCCGATGCGCCGAGATGGCCC CGATCATGAGTGGGGCGGCGGCGGCGGCGGGGGGCACGGGCGGCGCGGTCCCGCTCATCA AGAACGCCACCTCCGCGTCCCAGATGTCGCGTGGCAAGGCCGGCACCGGCGCCGGCGCGG TCGTCTGCTACTCCCCGATGATGGTCACCGCCTACGGCATCTGGCAGGGCGCCTCCCCTC TTGACTTCTCCCTCCCCCTCTTCCTCCTCCAGGTCGCCATCATCGTCGCCACCACCCGCC TCCTCGTCATCCTCCTCAAGCCCTTCCGCCAGCCTCGCGTCATCGCGGAGATCCTCGCTG GCGTGATACTGGGGCCGTCGGTGATGGGGCAGGTTTCGACGTGGGCGGTGAAAGTGTTCC CGGAGCGGAGCTTGCTGACGCTGGAGACGGTGGCGCACCTGGGGCTCCTCTACTTCCTCT TCCTGGTCGGCCTCGAGATGGACGTGAACACCATCAGGAGGTCGGGGAAGAAGGCGCTCA TCATCGCCGTCGCCGGCATGGCGCTGCCGTTCTGCATCGGCACGGCGACGTCGTTCATCT TCCGGCACCAGGTGTCCAAGAACGTGCACCAGGCCTCCTTCCTGCTCTTCCTCGGCGTCG CGCTCTCCGTCACCGCGTTCCCGGTGCTGGCGCGCATCCTCGCCGAGGTCAAGCTGCTCA ACTCCGACCTCGGCCGGATCGCCATGTCCGCCGCCATCGTCAACGACATGTGCGCCTGGA TCCTCCTCGCGCTCGCCATCGCCATCTCAGAGGTCAACAGTTCGGCCTTCTCCTCCCTCT GGGTGCTCATCGCCGGGGTGGCCTTCGTGCTCGCCTGCTTCTACGTCGTCCGCCCGCTCA TGTGGTGGATCGTCCGCCGCGTCCCCGAGGGGGAGGCCATCGGCGACGTGCACATCACGC TCATCCTCACCGGCGTCATGGTCGCCGGCGTCTGCACCGACGCCATCGGCATCCACTCCG TGTTCGGCGCGTTCGTGTACGGCCTCGTCATGCCGAGCGGCCCGCTCGGCGTCGTGCTAA TCGAGAAGCTCGAGGACTTCGTCACCGGCCTCCTCCTGCCGCTCTTCTTCGCCATCAGTG GCCTCCGCACGAACGTGACCAAGGTCCGGGACCCCATCACCGTGGGCCTCCTCGTGCTCG TGTTCGTCATGGCCAGCTTCGCCAAGATCATGGGCACCATCCTCATCGCCGTCTCCTACA CCATGACGTTCCGCGACGGCGTCGCCCTGGGGTTCCTCATGAACACCAGGGGCCTCGTCG AGATGATCGTCCTCAACATCGGGAGGGACAAGGAGGTGCTCGACGACGAGTCGTTCGCCG TGATGGTGCTGGTGTCGGTGGCCATGACGGCGCTGGTCACGCCGGTGGTGACGACGGTGT ACCGGCCGGCGCGGCGGCTGGTCGGGTACAAGCGGCGGAACCTGCAGCGGTCGAAGCACG ACGCGGAGCTCCGGATGCTGGCGTGCGTGCACACCACCCGCAACGTGCCGTCGATCATCT CGCTGCTCGAGCTCTCCAACCCGACGAAGCGCTCGCCGATCTTCATCTACGCGCTCCACC TCGTCGAGCTCACCGGCCGCGCCTCCAACATGCTCGCCGCGCACCACTCGGCGTCGAACC CGGGCGGCGCCAGCGACCACATCTTCAACGCGTTCGAGAGCTACGAGGAGATGGTCGGCG GCGTGTCGGTGCAGGCGCTCACGGCGGTGTCGCCGTACCAGACGATGCACGAGGACGTGT GCGTGCTGGCGGAGGACAAGCACGTCTCGCTCATCGTGCTCCCGTTCCACAAGCAGCAGA CGGTGGACGGCGGCATGGAGCCCATCAACGCGTCGCTCCGGGGCTTCAACGAGAGCATCC TCGCGTCGGCGCCGTGCTCCGTCGGCATCCTCGTCGACCGCGGCCTCAGCGCCGCCGCGG CGAGGATGGCGGCCGTGCACCACGTCGCGCTCCTCTTCTTCGGCGGGCCCGACGACCGGG AGGGGCTCGCGTACGCGTGGCGGATGGTCGAAAACCCGGGCGTGTGCCTCACCATCGTCC GCTTAATCCCGCCGGGGTACACGGCGCCGGCGATCTCGCCGCCGCAGCCGCCGATGCCCG CCGCCCACTCCCGCGCCATCAACGTCGTCCCCGAGGTCGCCAAGAGCGAGCGGCAGATGG ACGAGGAGTACCTCAACGAGTTCCGGTCGCGCAACCTCGGCAACGACGCCATCCTCTACG TCGAGCAGGTGGTGGCCAACAGCGAGGAGACGGTCGCCGCCATCCGCAGCCAGCTGGACA ACGCGCACGAGCTGTACATCGTCGGCCGCCACCCCGGCGAGGCGAGCTCGCCGCTGACGT CGGCGCTCGCCGAGTGGATGGAGTCGCCGGAGCTCGGCCCCATCGGCGACCTCCTCGTCT CCTCCGAGTTCTCCAAGATGGCGTCCGTGCTGGTCATGCAGCAGTACGTCATCACGGCGC CGCTGCCGCCGCCGGTGGCGCTCGCCGGGCCGCCGACGGATGACCCCGTCCGGCAGTATT TGACCAACGCCAACCAGCGGCCGTCGGTGGCGATCGGCGGCAACCAGATGGGCGCCGCCG GCCGAGGCGGATGGAGCGGCGGCGCCGGCGGGTACTGACCGGACTCCGATCCGATCGAGC GCTTCGCTGTAATCGCCGTCAGTTAATCGCTCGATTGGTAGTAGTAGGGTTTCGAAGCTT AATTATTTTTAGGAATTAATTATGATTGTTAATTAATTTTTGTTGTGTAGTACGGAGTAC AATTCTAGGTGATTGTTTTTGTAGATGTCGTGTTTAATTGGTCAGATTCTGTGATCGATC CCTCCTGTAGTGTGAGAGGTGATCGATTACATGTACTACTACGTGTTTTAACTCTTCTAG GTTCTTAACTAATTGTTCTTAGAGATGTTTCATATGC