Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0482700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:23748753:23753405:-1 gene:Os05g0482700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I). (Os05t0482700-01)
Sequence	ATGGGAAGCTCAGATTTCTCGTGGACATTGCCTGATCACCCAAAGCTCCCTAAGGGGAAG CCGGTGGCCGTGGTTGTACTGGATGGATGGGGTGAGGCTGATGCGGACCAGTATAACTGC ATCCATGTTGCTGAGACACCAACAATGGATTCGCTCAAGAAGGGTGCTCCAGAGAAGTGG AAGCTTGTAAAGGCTCATGGAACAGCTGTTGGTCTCCCTTCTGATGATGACATGGGTAAC AGTGAGGTTGGGCATAACGCACTTGGTGCTGGTCGGATTTTTGCTCAAGGGGCTAAACTT GTGGATACTGCTTTGGCCTCTGGAAAAATTTTTGAAGGAGAAGGGTTTAAGTACATTAAG GAGAGTTTTGACCAAGGCACTCTTCATCTTATTGGGTTGTTGAGCGACGGAGGTGTCCAC TCACGGCTTGACCAGTTGCAGTTGCTCCTGAATGGTGCAAGTGCGAATGGAGCGAAAAAA ATCCGTGTTCACATTCTTACTGATGGACGTGATGTTTTGGATGGCACAAGCGTTGGTTTT GTTGAAACGCTAGAGAATGATCTTTCTCAACTGCGTGCCAAGGGCATTGATGCGTGCATT GCATCAGGTGGTGGAAGGATGTATGTTACCATGGACCGATATGAGAATGACTGGGATGTT GTTAAACGTGGATGGGATGCTCAGGTGCTTGGAGAAGCACCTCACAAGTTCCAAAACGCT GTTGAAGCTGTGAAAACACTCCGGTCAGAGACCAAGGCTAATGATCAGTATCTTCCCCCA TTTGTGATTGTTGACGATAGTGACAAGGCTGTTGGGCCTATAGTAGATGGTGATGCAGTT GTGACCTTCAATTTCCGTGCTGATCGCATGGTTATGATTGCTAAGGCTTTAGAGTATGAA GATTTTGATAAATTTGATCGTGTTCGTGTCCCAAAGATCCGATATGCTGGTATGCTTCAG TATGATGGTGAGCTGAAGCTTCCAAGCCACTACCTTGTTTCACCACCAGAGATTGAGAGG ACATCCGGTGAATACTTGGTGAAAAATGGCATCCGCACCTTTGCTTGCAGTGAAACTGTG AAGTTCGGCCATGTCACATTTTTCTGGAATGGAAACCGCTCTGGATACTTCGATGAAACA AAGGAAGAGTATGTGGAAATCCCTAGTGACAGTGGTATCACATTCAATGTTAAACCCAAG ATGAAGGCCCTTGAGATTGCTGAGAAAGCTAGAGATGCTATCCTTAGTGGCAAGTTTGAC CAGGTCCGCGTTAACCTCCCAAATGGTGATATGGTGGGTCACACTGGTGACATTGAGGCC ACAGTGGTTGCTTGCAAAGCTGCTGATGAGGCTGTCAAGATGATTCTGGATGCCATTGAG CAAGTGGGTGGCATCTATTTGGTCACCGCCGATCATGGCAACGCCGAGGATATGGTGAAG AGGAACAAATCCGGCCAGCCACAGCTTGACAAGAAAGGCGAAATCCAGATTCTTACCTCA CACACTCTTCAGCCAGTGCCAGTTGCCATTGGAGGCCCTGGCCTACATTCTGGGGTGAGA TTCCGCAACGACGTGCAGACCCCTGGCCTCGCCAACGTCGCCGCCACCGTGATGAACCTC CACGGGTTTGAGGCCCCTGCTGACTACGAGCCAACCCTAATTGAAGTAGTTGACAAATAA

Peptide Sequence

PEP ID	Os05t0482700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:23748753:23753405:-1 gene:Os05g0482700 transcript:Os05t0482700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I). (Os05t0482700-01)
Sequence	MGSSDFSWTLPDHPKLPKGKPVAVVVLDGWGEADADQYNCIHVAETPTMDSLKKGAPEKW KLVKAHGTAVGLPSDDDMGNSEVGHNALGAGRIFAQGAKLVDTALASGKIFEGEGFKYIK ESFDQGTLHLIGLLSDGGVHSRLDQLQLLLNGASANGAKKIRVHILTDGRDVLDGTSVGF VETLENDLSQLRAKGIDACIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFQNA VEAVKTLRSETKANDQYLPPFVIVDDSDKAVGPIVDGDAVVTFNFRADRMVMIAKALEYE DFDKFDRVRVPKIRYAGMLQYDGELKLPSHYLVSPPEIERTSGEYLVKNGIRTFACSETV KFGHVTFFWNGNRSGYFDETKEEYVEIPSDSGITFNVKPKMKALEIAEKARDAILSGKFD QVRVNLPNGDMVGHTGDIEATVVACKAADEAVKMILDAIEQVGGIYLVTADHGNAEDMVK RNKSGQPQLDKKGEIQILTSHTLQPVPVAIGGPGLHSGVRFRNDVQTPGLANVAATVMNL HGFEAPADYEPTLIEVVDK

Transcript Sequence

Transcript ID	Os05t0482700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:23748753:23753405:-1 gene:Os05g0482700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I). (Os05t0482700-01)
Sequence	CGGCTTCATATCATCCGGCATCCAGAGAAAAATATAGCAACGAAAAAAAAGGAGAAAAAA AAAACAGTCTCTCTTCCGGTTTAGTTGGTGATGGGAAGCTCAGATTTCTCGTGGACATTG CCTGATCACCCAAAGCTCCCTAAGGGGAAGCCGGTGGCCGTGGTTGTACTGGATGGATGG GGTGAGGCTGATGCGGACCAGTATAACTGCATCCATGTTGCTGAGACACCAACAATGGAT TCGCTCAAGAAGGGTGCTCCAGAGAAGTGGAAGCTTGTAAAGGCTCATGGAACAGCTGTT GGTCTCCCTTCTGATGATGACATGGGTAACAGTGAGGTTGGGCATAACGCACTTGGTGCT GGTCGGATTTTTGCTCAAGGGGCTAAACTTGTGGATACTGCTTTGGCCTCTGGAAAAATT TTTGAAGGAGAAGGGTTTAAGTACATTAAGGAGAGTTTTGACCAAGGCACTCTTCATCTT ATTGGGTTGTTGAGCGACGGAGGTGTCCACTCACGGCTTGACCAGTTGCAGTTGCTCCTG AATGGTGCAAGTGCGAATGGAGCGAAAAAAATCCGTGTTCACATTCTTACTGATGGACGT GATGTTTTGGATGGCACAAGCGTTGGTTTTGTTGAAACGCTAGAGAATGATCTTTCTCAA CTGCGTGCCAAGGGCATTGATGCGTGCATTGCATCAGGTGGTGGAAGGATGTATGTTACC ATGGACCGATATGAGAATGACTGGGATGTTGTTAAACGTGGATGGGATGCTCAGGTGCTT GGAGAAGCACCTCACAAGTTCCAAAACGCTGTTGAAGCTGTGAAAACACTCCGGTCAGAG ACCAAGGCTAATGATCAGTATCTTCCCCCATTTGTGATTGTTGACGATAGTGACAAGGCT GTTGGGCCTATAGTAGATGGTGATGCAGTTGTGACCTTCAATTTCCGTGCTGATCGCATG GTTATGATTGCTAAGGCTTTAGAGTATGAAGATTTTGATAAATTTGATCGTGTTCGTGTC CCAAAGATCCGATATGCTGGTATGCTTCAGTATGATGGTGAGCTGAAGCTTCCAAGCCAC TACCTTGTTTCACCACCAGAGATTGAGAGGACATCCGGTGAATACTTGGTGAAAAATGGC ATCCGCACCTTTGCTTGCAGTGAAACTGTGAAGTTCGGCCATGTCACATTTTTCTGGAAT GGAAACCGCTCTGGATACTTCGATGAAACAAAGGAAGAGTATGTGGAAATCCCTAGTGAC AGTGGTATCACATTCAATGTTAAACCCAAGATGAAGGCCCTTGAGATTGCTGAGAAAGCT AGAGATGCTATCCTTAGTGGCAAGTTTGACCAGGTCCGCGTTAACCTCCCAAATGGTGAT ATGGTGGGTCACACTGGTGACATTGAGGCCACAGTGGTTGCTTGCAAAGCTGCTGATGAG GCTGTCAAGATGATTCTGGATGCCATTGAGCAAGTGGGTGGCATCTATTTGGTCACCGCC GATCATGGCAACGCCGAGGATATGGTGAAGAGGAACAAATCCGGCCAGCCACAGCTTGAC AAGAAAGGCGAAATCCAGATTCTTACCTCACACACTCTTCAGCCAGTGCCAGTTGCCATT GGAGGCCCTGGCCTACATTCTGGGGTGAGATTCCGCAACGACGTGCAGACCCCTGGCCTC GCCAACGTCGCCGCCACCGTGATGAACCTCCACGGGTTTGAGGCCCCTGCTGACTACGAG CCAACCCTAATTGAAGTAGTTGACAAATAAATTAAATGTAAACAGCGGATTTTGTCGCTG TGATTTTGCTATGGGTCAGAGAAATGGTCTCTGCGATGTTGAATACTCCGTTTTTATGAG CAGTCTGCTGGAACCTACGAGGGTTTTTATAAAAACGAAACTGATTTATGATTTGC