Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0482501-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:23739115:23739799:1 gene:Os05g0482501 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0482501-00)
Sequence

ATGTCGGGGTCCGGCGACGCCGCGCCGGCGCGGCACAACGCGGGTCACGGTCGGCGACGA
CGGCGCGTCCTCGTCTGGGCCAGCTTCGCCGCGCTGGTCCTGCTGCTCGTCGCCGCGGCG
GCCGCCATCGCCGCGCTCGCCGTGCTCCGGCCGCGGGACCCGACCACGGAGCTCCTGTCC
GTGAACGCCACGGGCGCCACCCCGCGCGTCGCCGCGCTGCCGGCCGTCTCCGTCCAGCTC
AACGTCACCTTCCTCCTCGTCGTCCGCGTGCGCAACCCGAACCGGGCGGAGTTCCGCCAC
GGCGCCGCCACGACGGCGCTCCTGTACCGCGGCGCCGAGGTGGGCGCCGCCGGCGTGCCC
GCGGGGACGGTGCCGAGCCGCGGCGCGGCGACGCTGAGGCTGAACATGACGGTGCGGGCG
GACAGGGTGGTGGCGGCGGCCGGGGTGGGCGGCCTCCTCGCGGACGTGCTCGCCGGCGAG
ATGGAGTTCGAGGCGAGGACGGAGGTGCGCGGGCGGGTGAAGCTGCTCGGGCTCGTCCGG
CGGAGCGCCGTGGCGAGGTCGCTGTGCCGCGTCGTGATCGGCGTCGCCGACGTGAAGGTC
CGGCGCCAGGAGTGCCACAACGAGTCCAAGCTGTGA

Peptide Sequence

PEP ID

Os05t0482501-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:23739115:23739799:1 gene:Os05g0482501 transcript:Os05t0482501-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0482501-00)
Sequence

MSGSGDAAPARHNAGHGRRRRRVLVWASFAALVLLLVAAAAAIAALAVLRPRDPTTELLS
VNATGATPRVAALPAVSVQLNVTFLLVVRVRNPNRAEFRHGAATTALLYRGAEVGAAGVP
AGTVPSRGAATLRLNMTVRADRVVAAAGVGGLLADVLAGEMEFEARTEVRGRVKLLGLVR
RSAVARSLCRVVIGVADVKVRRQECHNESKL

Transcript Sequence

Transcript ID

Os05t0482501-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23739115:23739799:1 gene:Os05g0482501 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0482501-00)
Sequence

TGTGCACCATCAGCTCGCCAGCAGCGCGCGCCAAGAAAGACCAGCAGCCATGTCGGGGTC
CGGCGACGCCGCGCCGGCGCGGCACAACGCGGGTCACGGTCGGCGACGACGGCGCGTCCT
CGTCTGGGCCAGCTTCGCCGCGCTGGTCCTGCTGCTCGTCGCCGCGGCGGCCGCCATCGC
CGCGCTCGCCGTGCTCCGGCCGCGGGACCCGACCACGGAGCTCCTGTCCGTGAACGCCAC
GGGCGCCACCCCGCGCGTCGCCGCGCTGCCGGCCGTCTCCGTCCAGCTCAACGTCACCTT
CCTCCTCGTCGTCCGCGTGCGCAACCCGAACCGGGCGGAGTTCCGCCACGGCGCCGCCAC
GACGGCGCTCCTGTACCGCGGCGCCGAGGTGGGCGCCGCCGGCGTGCCCGCGGGGACGGT
GCCGAGCCGCGGCGCGGCGACGCTGAGGCTGAACATGACGGTGCGGGCGGACAGGGTGGT
GGCGGCGGCCGGGGTGGGCGGCCTCCTCGCGGACGTGCTCGCCGGCGAGATGGAGTTCGA
GGCGAGGACGGAGGTGCGCGGGCGGGTGAAGCTGCTCGGGCTCGTCCGGCGGAGCGCCGT
GGCGAGGTCGCTGTGCCGCGTCGTGATCGGCGTCGCCGACGTGAAGGTCCGGCGCCAGGA
GTGCCACAACGAGTCCAAGCTGTGA