Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0481800-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:23692950:23697385:1 gene:Os05g0481800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0481800-01);Hypothetical conserved gene. (Os05t0481800-02)
Sequence

ATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCGACGCTCGCTCGCCGCCGCC
GCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGAGACAGCTGGTGCGTGCCTCGCTT
CTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTCAACCATGGCTGTGCAGTAC
CACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGTTCTTGAGGCTTTCAATCGG
GACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTCAGCATCTACTGCCTATGTT
GAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCAGATTCTCCGACATTTACAT
GATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGTGCTGGAGCAAACAGGCGAA
GTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCTGCTGCTTTCCAAAATAGCT
CCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCAGAAGTTGGATGACTATGAA
CTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACATGATAGAGATCCTACAGTG
ATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGATTGATAAATGTTTGATCATA
TTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGTCACATTCAATACCATTTTG
GACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCAGGAGGTGAAGCTAATGGAT
GAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGTAATAAACTGCTTGCGGAGG
CTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAATGGTTGAGAGAGGCATCGAT
CCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGGGCGGGCTGGCCATATTACT
GAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCAACCTTCAATTTATGTCTAC
CGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGAACTTGCACAAAAGTTATCT
GAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGAAGATTTTAAACATAAGTTC
AAGGGTAGAAAGATCAACAAGAACAAGTAA

Peptide Sequence

PEP ID

Os05t0481800-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:23692950:23697385:1 gene:Os05g0481800 transcript:Os05t0481800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0481800-01);Hypothetical conserved gene. (Os05t0481800-02)
Sequence

MRRFSPAAAALLLRRSLAAAAAAASPALRSGPRQLVRASLLDESLSTQTSSAASTMAVQY
HQWSSSADGDDDEVLEAFNRDCCTDAGAGVLDDSASTAYVEKLCTSGNLPDAVQILRHLH
DRKIHVGLGTFNLVLEQTGEVNNFVLFAKVFRYLLLSKIAPDLTSYTNVAKALQKLDDYE
LILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDKCLIIFEELKKDQRGLDVVTFNTIL
DMLGKAGRVDQMLQEVKLMDELGHSPDIVTYNTVINCLRRLGRLDQCKIFAREMVERGID
PDLRTYTALIDIFGRAGHITEALEMFDQMKRSHQPSIYVYRALISDLKKAGQFELAQKLS
EEMKTSASELLGPEDFKHKFKGRKINKNK

Transcript Sequence

Transcript ID

Os05t0481800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23692950:23697385:1 gene:Os05g0481800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0481800-01);Hypothetical conserved gene. (Os05t0481800-02)
Sequence

GCGCGCGCCGTCCGCCCCCAAAAACCCTCGCCCCAAACCCCGCGCCGGCCGAAGCGGCGG
CTCCGTGCGGATGCCCTCCCGTCCCGTCCCGGCGCGCCCCGGCCGGCGGTAGTAGGAAGT
GGGGGGCGCCGAGCGTAAGATGCGGCGCTTCTCCCCGGCCGCCGCGGCGCTGCTCCTCCG
ACGCTCGCTCGCCGCCGCCGCCGCCGCCGCCTCACCAGCGCTCCGCTCGGGTCCGAGACA
GCTGGTGCGTGCCTCGCTTCTTGACGAAAGTTTGTCTACACAGACGAGTTCAGCGGCTTC
AACCATGGCTGTGCAGTACCACCAATGGTCTAGTTCAGCAGACGGGGATGATGATGAGGT
TCTTGAGGCTTTCAATCGGGACTGTTGTACCGATGCAGGTGCTGGTGTTTTGGATGATTC
AGCATCTACTGCCTATGTTGAGAAGCTCTGCACATCAGGCAACCTCCCTGATGCTGTTCA
GATTCTCCGACATTTACATGATAGGAAGATCCATGTAGGATTGGGTACGTTTAATTTGGT
GCTGGAGCAAACAGGCGAAGTGAACAACTTCGTTCTTTTTGCCAAGGTGTTCAGGTACCT
GCTGCTTTCCAAAATAGCTCCTGACTTGACTTCTTATACAAATGTTGCAAAGGCCCTTCA
GAAGTTGGATGACTATGAACTAATACTTAAATTTGTGAGACAAGTTATGGAAATTACACA
TGATAGAGATCCTACAGTGATGAATCGCATTGTTTTCACCACGGCTAAATATGGACAGAT
TGATAAATGTTTGATCATATTTGAAGAACTGAAGAAAGATCAAAGAGGGTTAGATGTTGT
CACATTCAATACCATTTTGGACATGCTTGGAAAGGCTGGTCGGGTGGATCAAATGCTTCA
GGAGGTGAAGCTAATGGATGAACTTGGCCATTCTCCTGACATTGTTACATACAATACTGT
AATAAACTGCTTGCGGAGGCTTGGAAGGTTAGATCAGTGCAAAATCTTCGCAAGAGAAAT
GGTTGAGAGAGGCATCGATCCAGATTTAAGAACATATACTGCACTGATTGATATTTTCGG
GCGGGCTGGCCATATTACTGAAGCCCTTGAAATGTTTGACCAGATGAAAAGGTCACATCA
ACCTTCAATTTATGTCTACCGGGCCCTAATCAGTGACTTAAAGAAGGCTGGACAGTTTGA
ACTTGCACAAAAGTTATCTGAAGAGATGAAAACAAGTGCTTCAGAATTACTAGGCCCTGA
AGATTTTAAACATAAGTTCAAGGGTAGAAAGATCAACAAGAACAAGTAAGAAAACTGTCA
ATGATCTTCCAGGTGTGAATATTTCGTTTGCATGTGCCTTGTGCTCATCCACTGTTTCAG
CCAAAGATTCTGGGATAAGTTGAAATTTTTCAGGGAATGTATCTCATTAACAATGAGATA
ATCACATGGGCTTACAAAAGAGTGATGATTACTAACAGATACAATGATATCAGGCCGAGA
GAACCAGAATATAAATCATAAACCTCTTTGAAATATCATGGTTGGAGGCTTTTGCTGATG
TGCATTTGAAGAGACAGGAACACACTTCTCTCATTTATATCTTCACGGATGCAAGAGATT
ATCTAGAGACAGGTCCTTTGCTTATGAGACCTGAACTGTTTATCTGAGATTGTTCCACCA
TAGCGCAAACTTGAGCCAATGAAGAGTTAATTCTCGATTGAATTATGTGTGATGTGCTTC
TACTGGATTATCATGTGAATGACTTGTGATTTGTTCAGCACTCACTGGTTCAATTTCTGC
TTGTTCTGCACTTCTACAAGTTCAATTTCAGCATTGCCATTCATGTTCAGTGCCGTGAAG
AATAGTTGGAGCCTTGAGTAAGTTGTTTAGGTCCTTGTCGTGGATCACTAGATATAACAA
ATTAAATATAGATCACATTCTTTTATTGTCCTCTACTTTGCCATGCAGCCAAGTAGAATA
TTTTGTACTCATGTAAACTGTTAGTCCAAAGGAAGTGGCTAAATTTCTGTCGATTTTTCC
TCCCATTTTATTAGTTTTTTGGATCTTTGGATTGCATATCAAGATTCGTGCAAAGAAACT
GAGGTTCCACCTGTTTTGTTTTTTTATTCGAACCCCCTTTGTTACTGCGCCTCCTCCTTT
TTGTTTTCTTTTCACCAGATGGAGAGAGGGGGGAAGCTACATGAGAGGAGAGGTGATGGG
GGCGATTTCGTCGCCGGTAGATCCTGCAGCGGTGAGCTTCCTGATCCCTCCTGTCATTTT
TGTGTTGATTTTGTCTTCCTTGTCCTCTGCAGGTTTCAGCAATCTATGACTGGAGGCCAG
TGGTGTCGAGCTTGGCCAGGCTTTTGTCGGTGTAGCACTTCTTCTGTCTGTTTCCACATT
AGAGATACCTAGCTTTAGATGAGCTCACCTCTGAAGTCAGCATGCTCAATCTTGAGCGTG
CTAGGCAAATAAAGAGTCGACTGGTCGCTATATCTGGCATAGTTCACAAGGTCAGGGATG
AACTACAGTGCTAGCTAGATGACGACATCGACATGACAAAGCTCGCTTACCACTCAGCTG
GCTGCCAGTCATCAAGATTTGACATCGAGAAAGAAGCAAGCGAGCTCGAAGATAGTAATA
GGTATACTCCTACAAGACAAAAAAAAAAAAAAATCTTCCACAAGTTGATAAGTTGGTGCT
TCATCCAACCATGGACATGACGTGTGCCTGAATGCAGCGCCAGGGAGGACGATGTTGATA
AGTTGCAAACATGCTTCCACAATTTTCATGTTTTCTTGGGATGATAGCATACGGAGTATA
AGCCTTCATTTTATATTTTTACCTACAATATTCAGTCAAGCATCTCACCCTTTTACTTAC
TGATAACAATGTAAAGATAGATGCATTGCTCGAGTACATTAAAATTGGAGTGGCATTAGT
TTTGAAGCATTATTCCTG