Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0481400-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:23662349:23666681:-1 gene:Os05g0481400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os05t0481400-01)
Sequence

ATGGCGGCGGAGGCCGGCAGCGCGGCCGCCGGCGCCGCCTACGAGGAGGAGCGCCGGAAG
CGGGTCCTCGAGAACCTCAAGCACCTCGAGGATCTGGGCATAAAGAAGATGTCCAAGAGC
TTGCTGGAGGCGGCGAGATTGCAGAAGAGCACTCGTGCCAGCCCCAAGCCGCGGAAGAAG
TTTGAGGTTGGGGCCACTGAAGTGAGGCGTTCATCGAGGGCGCGCAACTCGGTTTCGTAC
AAAGAGAATTTTGATGAACTCAACAGTTTTCTATGCCGTAGAAGGGGCAGTAGGATTAGG
AGCACAGAGCAGGGGAGGGATTACACCGGAAGAGTTGCCTCTTATGAACAGCAACAACGT
GCTTTCAAAAAAGCTGAGAGACTTCAAAATAGTCTAGACCCTGAGAACCCGTCGTTTGTT
AAGACCATGGTTCGATCACATGTGTCCAGCTGCTTTTGGCTTGGTCTTCCAACTAGATTC
TGCAAATTGCATCTGCCTCCCAAAGAGTATAAGATGGTCTTGGAGGATGAAGAGGGTGGT
GAATTTGATTCTGTCTACATTGGGAACCGTACAGGCCTAAGTGGTGGATGGAGAGGTTTT
GCGATGCACCACAACTTGGAAGATGGTGATTCATTGGTCTTTGAATTGGCTGAACCAGAC
AGATTTAAGATCTACATCATAAAAGCTGTTGATGAGGATGCAAATGAGTCTGAGCCTGCT
GATGAGGAAGCTATTGGGGACAAGGACACCAGTACAGAGGATGCAGCTGAGCAGGATGAC
TCACCTAATGCTGAACCTTTAAAAGGAACTAAGAGGAGAAAACTCCGTGGACGCCGGTAG

Peptide Sequence

PEP ID

Os05t0481400-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:23662349:23666681:-1 gene:Os05g0481400 transcript:Os05t0481400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os05t0481400-01)
Sequence

MAAEAGSAAAGAAYEEERRKRVLENLKHLEDLGIKKMSKSLLEAARLQKSTRASPKPRKK
FEVGATEVRRSSRARNSVSYKENFDELNSFLCRRRGSRIRSTEQGRDYTGRVASYEQQQR
AFKKAERLQNSLDPENPSFVKTMVRSHVSSCFWLGLPTRFCKLHLPPKEYKMVLEDEEGG
EFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAEPDRFKIYIIKAVDEDANESEPA
DEEAIGDKDTSTEDAAEQDDSPNAEPLKGTKRRKLRGRR

Transcript Sequence

Transcript ID

Os05t0481400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:23662349:23666681:-1 gene:Os05g0481400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os05t0481400-01)
Sequence

CCTTTCTCTTAGTATTTTTTTTTCTCTCGGAGAGGAGAAGAGAGAGACCCATTTCCTCCT
CGCGTAGTCGCGTGCAGGGGAGAAGAAGGGTTTCGGCGGAGGGAGGAGGAGCCATGGCGG
CGGAGGCCGGCAGCGCGGCCGCCGGCGCCGCCTACGAGGAGGAGCGCCGGAAGCGGGTCC
TCGAGAACCTCAAGCACCTCGAGGATCTGGGCATAAAGAAGATGTCCAAGAGCTTGCTGG
AGGCGGCGAGATTGCAGAAGAGCACTCGTGCCAGCCCCAAGCCGCGGAAGAAGTTTGAGG
TTGGGGCCACTGAAGTGAGGCGTTCATCGAGGGCGCGCAACTCGGTTTCGTACAAAGAGA
ATTTTGATGAACTCAACAGTTTTCTATGCCGTAGAAGGGGCAGTAGGATTAGGAGCACAG
AGCAGGGGAGGGATTACACCGGAAGAGTTGCCTCTTATGAACAGCAACAACGTGCTTTCA
AAAAAGCTGAGAGACTTCAAAATAGTCTAGACCCTGAGAACCCGTCGTTTGTTAAGACCA
TGGTTCGATCACATGTGTCCAGCTGCTTTTGGCTTGGTCTTCCAACTAGATTCTGCAAAT
TGCATCTGCCTCCCAAAGAGTATAAGATGGTCTTGGAGGATGAAGAGGGTGGTGAATTTG
ATTCTGTCTACATTGGGAACCGTACAGGCCTAAGTGGTGGATGGAGAGGTTTTGCGATGC
ACCACAACTTGGAAGATGGTGATTCATTGGTCTTTGAATTGGCTGAACCAGACAGATTTA
AGATCTACATCATAAAAGCTGTTGATGAGGATGCAAATGAGTCTGAGCCTGCTGATGAGG
AAGCTATTGGGGACAAGGACACCAGTACAGAGGATGCAGCTGAGCAGGATGACTCACCTA
ATGCTGAACCTTTAAAAGGAACTAAGAGGAGAAAACTCCGTGGACGCCGGTAGTAATTAG
TTCTATCAGACTTTAAATATTGGTACTCTGTACAAGTATGCTGCGTATTATCAATTTGCT
CTCCTGTCAGGTCATCCTTATTGATCTTTTTTGTTGGCCTTTCCATTTGGTAGATTATGG
GTGTTCCACAAGACCATAACCACCCTTTTTGTTGCAGCTACGGACAGAGTGTTCACCATC
ATAGGTAGGTTTAGATAACTTGTAAAGAAATGTTGACAATTGAACACTTGTGTCCTGGAG
TCCATCTGTATTGTGCTGATTCACTGTGTTCAGCTTACATGATGGATGAGAACAGCATTG
GCTTATGTGGCAATGCTTTTTACCTGTGTCCATGGCTTCTTAAAACTGATCTACAGACCA
GAAAGGGAAGACATCGACGAACATTTACATTTTTCTTGC